RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	ZCRB1	Q8TBF4	217 aa	Known RBP	19.01	■□□□□ 0.63
PKD1-231	ENST00000566784	DOT1L	Q8TEK3	1739 aa		19	■□□□□ 0.63
PKD1-231	ENST00000566784	PPM1G	O15355	546 aa	Predicted RBP	19	■□□□□ 0.63
PKD1-231	ENST00000566784	KCNQ2	O43526	872 aa		19	■□□□□ 0.63
PKD1-231	ENST00000566784	NBPF14	Q5TI25	921 aa		19	■□□□□ 0.63
PKD1-231	ENST00000566784	USHBP1	Q8N6Y0	703 aa		19	■□□□□ 0.63
PKD1-231	ENST00000566784	DDX54	Q8TDD1	881 aa	Known RBP	19	■□□□□ 0.63
PKD1-231	ENST00000566784	RAPGEF4	Q8WZA2	1011 aa		19	■□□□□ 0.63
PKD1-231	ENST00000566784	KNSTRN	Q9Y448	316 aa		19	■□□□□ 0.63
PKD1-231	ENST00000566784	ACSBG1	Q96GR2	724 aa		18.99	■□□□□ 0.63
PKD1-231	ENST00000566784	PKD1L3	Q7Z443	1732 aa		18.99	■□□□□ 0.63
PKD1-231	ENST00000566784	TAT	P17735	454 aa	Predicted RBP	18.97	■□□□□ 0.63
PKD1-231	ENST00000566784	TNNT2	P45379	298 aa	Predicted RBP	18.97	■□□□□ 0.63
PKD1-231	ENST00000566784	PROM2	Q8N271	834 aa		18.97	■□□□□ 0.63
PKD1-231	ENST00000566784	TXNRD1	Q16881	649 aa		18.95	■□□□□ 0.62
PKD1-231	ENST00000566784	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.95	■□□□□ 0.62
PKD1-231	ENST00000566784	MORC1	Q86VD1	984 aa		18.95	■□□□□ 0.62
PKD1-231	ENST00000566784	EYA1	Q99502	592 aa		18.94	■□□□□ 0.62
PKD1-231	ENST00000566784	PCDH11X	Q9BZA7	1347 aa		18.94	■□□□□ 0.62
PKD1-231	ENST00000566784	PCDH11Y	Q9BZA8	1340 aa		18.94	■□□□□ 0.62
PKD1-231	ENST00000566784	LY75	O60449	1722 aa		18.92	■□□□□ 0.62
PKD1-231	ENST00000566784	PER1	O15534	1290 aa	Predicted RBP	18.92	■□□□□ 0.62
PKD1-231	ENST00000566784	EIF4A2	Q14240	407 aa	Known RBP	18.92	■□□□□ 0.62
PKD1-231	ENST00000566784	PAPPA	Q13219	1627 aa		18.92	■□□□□ 0.62
PKD1-231	ENST00000566784	PLEKHG2	Q9H7P9	1386 aa		18.92	■□□□□ 0.62
PKD1-231	ENST00000566784	CASZ1	Q86V15	1759 aa		18.91	■□□□□ 0.62
PKD1-231	ENST00000566784	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.91	■□□□□ 0.62
PKD1-231	ENST00000566784	ITGB4	P16144	1822 aa		18.9	■□□□□ 0.62
PKD1-231	ENST00000566784	TOGARAM1	Q9Y4F4	1720 aa		18.89	■□□□□ 0.61
PKD1-231	ENST00000566784	PRIM1	P49642	420 aa	Known RBP	18.89	■□□□□ 0.61
PKD1-231	ENST00000566784	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
PKD1-231	ENST00000566784	CYP27B1	O15528	508 aa		18.88	■□□□□ 0.61
PKD1-231	ENST00000566784	SYTL4	Q96C24	671 aa	Predicted RBP	18.88	■□□□□ 0.61
PKD1-231	ENST00000566784	IGSF1	Q8N6C5	1336 aa		18.88	■□□□□ 0.61
PKD1-231	ENST00000566784	NPC1L1	Q9UHC9	1359 aa		18.88	■□□□□ 0.61
PKD1-231	ENST00000566784	STK32B	Q9NY57	414 aa		18.87	■□□□□ 0.61
PKD1-231	ENST00000566784	SPG7	Q9UQ90	795 aa		18.87	■□□□□ 0.61
PKD1-231	ENST00000566784	SLC27A3	Q5K4L6	730 aa		18.86	■□□□□ 0.61
PKD1-231	ENST00000566784	QSER1	Q2KHR3	1735 aa		18.86	■□□□□ 0.61
PKD1-231	ENST00000566784	NKX1-1	Q15270	411 aa	Predicted RBP	18.85	■□□□□ 0.61
PKD1-231	ENST00000566784	SLC15A2	Q16348	729 aa		18.85	■□□□□ 0.61
PKD1-231	ENST00000566784	LRRC4B	Q9NT99	713 aa		18.83	■□□□□ 0.6
PKD1-231	ENST00000566784	CC2D1B	Q5T0F9	858 aa	Known RBP	18.82	■□□□□ 0.6
PKD1-231	ENST00000566784	IFNL2	Q8IZJ0	200 aa		18.81	■□□□□ 0.6
PKD1-231	ENST00000566784	SPON1	Q9HCB6	807 aa		18.81	■□□□□ 0.6
PKD1-231	ENST00000566784	TUBGCP6	Q96RT7	1819 aa		18.81	■□□□□ 0.6
PKD1-231	ENST00000566784	KDR	P35968	1356 aa		18.81	■□□□□ 0.6
PKD1-231	ENST00000566784	TAF1L	Q8IZX4	1826 aa		18.8	■□□□□ 0.6
PKD1-231	ENST00000566784	IL13	P35225	146 aa		18.8	■□□□□ 0.6
PKD1-231	ENST00000566784	MTHFS	P49914	203 aa		18.8	■□□□□ 0.6
PKD1-231	ENST00000566784	PHKG2	P15735	406 aa		18.79	■□□□□ 0.6
PKD1-231	ENST00000566784	C5	P01031	1676 aa		18.79	■□□□□ 0.6
PKD1-231	ENST00000566784	ZNF827	Q17R98	1081 aa		18.78	■□□□□ 0.6
PKD1-231	ENST00000566784	MPRIP	Q6WCQ1	1025 aa		18.78	■□□□□ 0.6
PKD1-231	ENST00000566784	AKT1S1	Q96B36	256 aa		18.78	■□□□□ 0.6
PKD1-231	ENST00000566784	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.78	■□□□□ 0.6
PKD1-231	ENST00000566784	AMOT	Q4VCS5	1084 aa		18.77	■□□□□ 0.6
PKD1-231	ENST00000566784	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.77	■□□□□ 0.6
PKD1-231	ENST00000566784	AEBP1	Q8IUX7	1158 aa		18.77	■□□□□ 0.6
PKD1-231	ENST00000566784	CCNL1	Q9UK58	526 aa	Predicted RBP	18.77	■□□□□ 0.6
PKD1-231	ENST00000566784	HMGB2	P26583	209 aa	Known RBP	18.76	■□□□□ 0.59
PKD1-231	ENST00000566784	SULT6B1	Q6IMI4	303 aa		18.76	■□□□□ 0.59
PKD1-231	ENST00000566784	SMARCC1	Q92922	1105 aa	Predicted RBP	18.76	■□□□□ 0.59
PKD1-231	ENST00000566784	PALLD	Q8WX93	1383 aa		18.76	■□□□□ 0.59
PKD1-231	ENST00000566784	HSP90AB1	P08238	724 aa	Known RBP	18.75	■□□□□ 0.59
PKD1-231	ENST00000566784	PIGB	Q92521	554 aa		18.75	■□□□□ 0.59
PKD1-231	ENST00000566784	COL3A1	P02461	1466 aa	Predicted RBP	18.74	■□□□□ 0.59
PKD1-231	ENST00000566784	ZBTB7A	O95365	584 aa		18.74	■□□□□ 0.59
PKD1-231	ENST00000566784	KCNQ4	P56696	695 aa		18.74	■□□□□ 0.59
PKD1-231	ENST00000566784	TMOD3	Q9NYL9	352 aa		18.74	■□□□□ 0.59
PKD1-231	ENST00000566784	VIRMA	Q69YN4	1812 aa	Known RBP	18.73	■□□□□ 0.59
PKD1-231	ENST00000566784	DIAPH1	O60610	1272 aa	Known RBP	18.73	■□□□□ 0.59
PKD1-231	ENST00000566784	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.73	■□□□□ 0.59
PKD1-231	ENST00000566784	MTFR1L	Q9H019	292 aa		18.73	■□□□□ 0.59
PKD1-231	ENST00000566784	COL24A1	Q17RW2	1714 aa		18.73	■□□□□ 0.59
PKD1-231	ENST00000566784	SCN11A	Q9UI33	1791 aa		18.73	■□□□□ 0.59
PKD1-231	ENST00000566784	DCAF5	Q96JK2	942 aa		18.72	■□□□□ 0.59
PKD1-231	ENST00000566784	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.72	■□□□□ 0.59
PKD1-231	ENST00000566784	ERVV-2	B6SEH9	535 aa		18.71	■□□□□ 0.59
PKD1-231	ENST00000566784	PTGER2	P43116	358 aa		18.71	■□□□□ 0.59
PKD1-231	ENST00000566784	TFCP2L1	Q9NZI6	479 aa		18.71	■□□□□ 0.59
PKD1-231	ENST00000566784	KDM6A	O15550	1401 aa	Predicted RBP	18.71	■□□□□ 0.59
PKD1-231	ENST00000566784	PNPLA7	Q6ZV29	1317 aa		18.71	■□□□□ 0.59
PKD1-231	ENST00000566784	ZNF831	Q5JPB2	1677 aa		18.7	■□□□□ 0.58
PKD1-231	ENST00000566784	C4B	P0C0L5	1744 aa		18.7	■□□□□ 0.58
PKD1-231	ENST00000566784	SLC16A10	Q8TF71	515 aa		18.7	■□□□□ 0.58
PKD1-231	ENST00000566784	CNGB1	Q14028	1251 aa	Predicted RBP	18.69	■□□□□ 0.58
PKD1-231	ENST00000566784	C1orf141	Q5JVX7	400 aa		18.69	■□□□□ 0.58
PKD1-231	ENST00000566784	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.69	■□□□□ 0.58
PKD1-231	ENST00000566784	UBR3	Q6ZT12	1888 aa		18.69	■□□□□ 0.58
PKD1-231	ENST00000566784	SGIP1	Q9BQI5	828 aa		18.68	■□□□□ 0.58
PKD1-231	ENST00000566784	LOC102724428	A0A0B4J2F2	783 aa		18.67	■□□□□ 0.58
PKD1-231	ENST00000566784	HMOX1	P09601	288 aa		18.67	■□□□□ 0.58
PKD1-231	ENST00000566784	SIK1	P57059	783 aa		18.67	■□□□□ 0.58
PKD1-231	ENST00000566784	ASAP1	Q9ULH1	1129 aa		18.67	■□□□□ 0.58
PKD1-231	ENST00000566784	ATG3	Q9NT62	314 aa		18.66	■□□□□ 0.58
PKD1-231	ENST00000566784	AKAP4	Q5JQC9	854 aa		18.65	■□□□□ 0.58
PKD1-231	ENST00000566784	CFAP53	Q96M91	514 aa		18.65	■□□□□ 0.58
PKD1-231	ENST00000566784	ADAMTS7	Q9UKP4	1686 aa		18.65	■□□□□ 0.58
PKD1-231	ENST00000566784	CABP4	P57796	275 aa		18.64	■□□□□ 0.57

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