RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
LINC01541-201ENST00000566582 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
LINC01541-201ENST00000566582 MIS18AQ9NYP9 233 aa11.07□□□□□ -0.64
LINC01541-201ENST00000566582 TSPYL4Q9UJ04 414 aa11.07□□□□□ -0.64
LINC01541-201ENST00000566582 XPCQ01831 940 aaPredicted RBP11.06□□□□□ -0.64
LINC01541-201ENST00000566582 KDRP35968 1356 aa11.06□□□□□ -0.64
LINC01541-201ENST00000566582 KIF24Q5T7B8 1368 aa11.06□□□□□ -0.64
LINC01541-201ENST00000566582 ORAI2Q96SN7 254 aa11.06□□□□□ -0.64
LINC01541-201ENST00000566582 ZBTB7BO15156 539 aaPredicted RBP11.05□□□□□ -0.64
LINC01541-201ENST00000566582 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
LINC01541-201ENST00000566582 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
LINC01541-201ENST00000566582 DNAJC5Q9H3Z4 198 aa11.05□□□□□ -0.64
LINC01541-201ENST00000566582 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
LINC01541-201ENST00000566582 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
LINC01541-201ENST00000566582 NBR1Q14596 966 aa11.04□□□□□ -0.64
LINC01541-201ENST00000566582 ABCC4O15439 1325 aa11.04□□□□□ -0.64
LINC01541-201ENST00000566582 KIAA0232Q92628 1395 aa11.04□□□□□ -0.64
LINC01541-201ENST00000566582 CRB1P82279 1406 aa11.04□□□□□ -0.64
LINC01541-201ENST00000566582 SMC5Q8IY18 1101 aa11.03□□□□□ -0.64
LINC01541-201ENST00000566582 IP6K1Q92551 441 aa11.03□□□□□ -0.64
LINC01541-201ENST00000566582 UPF2Q9HAU5 1272 aaKnown RBP11.03□□□□□ -0.64
LINC01541-201ENST00000566582 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
LINC01541-201ENST00000566582 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
LINC01541-201ENST00000566582 HTATSF1O43719 755 aaKnown RBP11.02□□□□□ -0.65
LINC01541-201ENST00000566582 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
LINC01541-201ENST00000566582 SEC24BO95487 1268 aa11.01□□□□□ -0.65
LINC01541-201ENST00000566582 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
LINC01541-201ENST00000566582 LTN1O94822 1766 aa11.01□□□□□ -0.65
LINC01541-201ENST00000566582 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
LINC01541-201ENST00000566582 GCP02774 474 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 SLC4A3P48751 1232 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 ANKRD45Q5TZF3 282 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 STK31Q9BXU1 1019 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 C19orf44Q9H6X5 657 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 MAP3K5Q99683 1374 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 NUCB1Q02818 461 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 NBPF6Q5VWK0 638 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 KRT28Q7Z3Y7 464 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 CHD1LQ86WJ1 897 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 GCC1Q96CN9 775 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 NBPF4Q96M43 638 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 PTPRCP08575 1304 aa11□□□□□ -0.65
LINC01541-201ENST00000566582 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
LINC01541-201ENST00000566582 ATF3P18847 181 aa10.99□□□□□ -0.65
LINC01541-201ENST00000566582 BCL11AQ9H165 835 aa10.99□□□□□ -0.65
LINC01541-201ENST00000566582 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
LINC01541-201ENST00000566582 SLC4A10Q6U841 1118 aa10.99□□□□□ -0.65
LINC01541-201ENST00000566582 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
LINC01541-201ENST00000566582 TAF7Q15545 349 aaPredicted RBP10.98□□□□□ -0.65
LINC01541-201ENST00000566582 IL17REQ8NFR9 667 aa10.98□□□□□ -0.65
LINC01541-201ENST00000566582 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
LINC01541-201ENST00000566582 NWD1Q149M9 1564 aa10.98□□□□□ -0.65
LINC01541-201ENST00000566582 NFAT5O94916 1531 aa10.98□□□□□ -0.65
LINC01541-201ENST00000566582 CCDC30Q5VVM6 783 aa10.97□□□□□ -0.65
LINC01541-201ENST00000566582 RTL5Q5HYW3 569 aaPredicted RBP10.97□□□□□ -0.65
LINC01541-201ENST00000566582 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
LINC01541-201ENST00000566582 G2E3Q7L622 706 aa10.96□□□□□ -0.65
LINC01541-201ENST00000566582 ARHGEF25Q86VW2 580 aa10.96□□□□□ -0.65
LINC01541-201ENST00000566582 C1orf167Q5SNV9 1468 aa10.96□□□□□ -0.65
LINC01541-201ENST00000566582 MSH6P52701 1360 aa10.96□□□□□ -0.65
LINC01541-201ENST00000566582 USP19O94966 1318 aa10.96□□□□□ -0.66
LINC01541-201ENST00000566582 F6X3S4 739 aa10.96□□□□□ -0.66
LINC01541-201ENST00000566582 ANKRD24Q8TF21 1146 aa10.96□□□□□ -0.66
LINC01541-201ENST00000566582 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
LINC01541-201ENST00000566582 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
LINC01541-201ENST00000566582 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
LINC01541-201ENST00000566582 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
LINC01541-201ENST00000566582 PLEKHO1Q53GL0 409 aaPredicted RBP10.95□□□□□ -0.66
LINC01541-201ENST00000566582 ZNF530Q6P9A1 599 aaPredicted RBP10.95□□□□□ -0.66
LINC01541-201ENST00000566582 RGS12O14924 1447 aa10.95□□□□□ -0.66
LINC01541-201ENST00000566582 HSPA2P54652 639 aa10.95□□□□□ -0.66
LINC01541-201ENST00000566582 TEFQ10587 303 aa10.95□□□□□ -0.66
LINC01541-201ENST00000566582 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
LINC01541-201ENST00000566582 MEIS3Q99687 375 aa10.95□□□□□ -0.66
LINC01541-201ENST00000566582 DDX17Q92841 729 aaKnown RBP10.94□□□□□ -0.66
LINC01541-201ENST00000566582 LGR6Q9HBX8 967 aa10.94□□□□□ -0.66
LINC01541-201ENST00000566582 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
LINC01541-201ENST00000566582 CCT4P50991 539 aaKnown RBP10.94□□□□□ -0.66
LINC01541-201ENST00000566582 FLIIQ13045 1269 aa10.94□□□□□ -0.66
LINC01541-201ENST00000566582 BECN1Q14457 450 aa10.94□□□□□ -0.66
LINC01541-201ENST00000566582 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
LINC01541-201ENST00000566582 LRRC37A3O60309 1634 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 AMOTQ4VCS5 1084 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 HDGFL1Q5TGJ6 251 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 MPRIPQ6WCQ1 1025 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 ANKRD44Q8N8A2 993 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 TBC1D32Q96NH3 1257 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 KIF1AQ12756 1690 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 APBB1O00213 710 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
LINC01541-201ENST00000566582 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
LINC01541-201ENST00000566582 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
LINC01541-201ENST00000566582 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
LINC01541-201ENST00000566582 SLIT3O75094 1523 aa10.92□□□□□ -0.66
LINC01541-201ENST00000566582 RGPD2P0DJD1 1756 aa10.92□□□□□ -0.66
LINC01541-201ENST00000566582 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
LINC01541-201ENST00000566582 BTBD11A6QL63 1104 aa10.92□□□□□ -0.66
LINC01541-201ENST00000566582 DCTPP1Q9H773 170 aa10.92□□□□□ -0.66
LINC01541-201ENST00000566582 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms