RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 PTF1AQ7RTS3 328 aa29.54■■■□□ 2.32
SPG7-214ENST00000566371 ZCRB1Q8TBF4 217 aaKnown RBP29.54■■■□□ 2.32
SPG7-214ENST00000566371 PER1O15534 1290 aaPredicted RBP29.53■■■□□ 2.32
SPG7-214ENST00000566371 DDX54Q8TDD1 881 aaKnown RBP29.52■■■□□ 2.32
SPG7-214ENST00000566371 SRCAPQ6ZRS2 3230 aa29.5■■■□□ 2.31
SPG7-214ENST00000566371 TATP17735 454 aaPredicted RBP29.5■■■□□ 2.31
SPG7-214ENST00000566371 KCNQ2O43526 872 aa29.49■■■□□ 2.31
SPG7-214ENST00000566371 EIF4A2Q14240 407 aaKnown RBP29.47■■■□□ 2.31
SPG7-214ENST00000566371 ACSBG1Q96GR2 724 aa29.47■■■□□ 2.31
SPG7-214ENST00000566371 PKD1L3Q7Z443 1732 aa29.46■■■□□ 2.31
SPG7-214ENST00000566371 EYA1Q99502 592 aa29.46■■■□□ 2.31
SPG7-214ENST00000566371 NPC1L1Q9UHC9 1359 aa29.46■■■□□ 2.31
SPG7-214ENST00000566371 BTAF1O14981 1849 aa29.45■■■□□ 2.31
SPG7-214ENST00000566371 PCDH11XQ9BZA7 1347 aa29.45■■■□□ 2.3
SPG7-214ENST00000566371 PCDH11YQ9BZA8 1340 aa29.45■■■□□ 2.3
SPG7-214ENST00000566371 PSDA5PKW4 1024 aaPredicted RBP29.44■■■□□ 2.3
SPG7-214ENST00000566371 DOT1LQ8TEK3 1739 aa29.43■■■□□ 2.3
SPG7-214ENST00000566371 PLEKHG2Q9H7P9 1386 aa29.43■■■□□ 2.3
SPG7-214ENST00000566371 NBPF14Q5TI25 921 aa29.43■■■□□ 2.3
SPG7-214ENST00000566371 R3HDM1Q15032 1099 aaKnown RBP29.42■■■□□ 2.3
SPG7-214ENST00000566371 PROM2Q8N271 834 aa29.4■■■□□ 2.3
SPG7-214ENST00000566371 IGSF1Q8N6C5 1336 aa29.4■■■□□ 2.3
SPG7-214ENST00000566371 TXNRD1Q16881 649 aa29.38■■■□□ 2.29
SPG7-214ENST00000566371 CC2D1BQ5T0F9 858 aaKnown RBP29.38■■■□□ 2.29
SPG7-214ENST00000566371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.38■■■□□ 2.298e-8■■■□□ 14.6
SPG7-214ENST00000566371 KAT6BQ8WYB5 2073 aa29.38■■■□□ 2.29
SPG7-214ENST00000566371 LRP5O75197 1615 aa29.38■■■□□ 2.29
SPG7-214ENST00000566371 SPG7Q9UQ90 795 aa29.37■■■□□ 2.29
SPG7-214ENST00000566371 PRIM1P49642 420 aaKnown RBP29.36■■■□□ 2.29
SPG7-214ENST00000566371 CYP27B1O15528 508 aa29.35■■■□□ 2.29
SPG7-214ENST00000566371 SYTL4Q96C24 671 aaPredicted RBP29.34■■■□□ 2.29
SPG7-214ENST00000566371 MTHFSP49914 203 aa29.32■■■□□ 2.28
SPG7-214ENST00000566371 IL13P35225 146 aa29.3■■■□□ 2.28
SPG7-214ENST00000566371 NKX1-1Q15270 411 aaPredicted RBP29.3■■■□□ 2.28
SPG7-214ENST00000566371 ANO8Q9HCE9 1232 aaPredicted RBP29.3■■■□□ 2.28
SPG7-214ENST00000566371 PAPPAQ13219 1627 aa29.29■■■□□ 2.28
SPG7-214ENST00000566371 TOGARAM1Q9Y4F4 1720 aa29.28■■■□□ 2.28
SPG7-214ENST00000566371 KDRP35968 1356 aa29.27■■■□□ 2.28
SPG7-214ENST00000566371 SLC27A3Q5K4L6 730 aa29.27■■■□□ 2.28
SPG7-214ENST00000566371 LY75O60449 1722 aa29.27■■■□□ 2.28
SPG7-214ENST00000566371 IFNL2Q8IZJ0 200 aa29.25■■■□□ 2.27
SPG7-214ENST00000566371 PHKG2P15735 406 aa29.24■■■□□ 2.27
SPG7-214ENST00000566371 STK32BQ9NY57 414 aa29.24■■■□□ 2.27
SPG7-214ENST00000566371 ITGB4P16144 1822 aa29.24■■■□□ 2.27
SPG7-214ENST00000566371 AEBP1Q8IUX7 1158 aa29.23■■■□□ 2.27
SPG7-214ENST00000566371 CASZ1Q86V15 1759 aa29.22■■■□□ 2.27
SPG7-214ENST00000566371 SLC15A2Q16348 729 aa29.22■■■□□ 2.27
SPG7-214ENST00000566371 AMOTQ4VCS5 1084 aa29.22■■■□□ 2.27
SPG7-214ENST00000566371 PLEKHO1Q53GL0 409 aaPredicted RBP29.22■■■□□ 2.27
SPG7-214ENST00000566371 SULT6B1Q6IMI4 303 aa29.22■■■□□ 2.27
SPG7-214ENST00000566371 LRRC4BQ9NT99 713 aa29.22■■■□□ 2.27
SPG7-214ENST00000566371 COL3A1P02461 1466 aaPredicted RBP29.21■■■□□ 2.27
SPG7-214ENST00000566371 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
SPG7-214ENST00000566371 CNGB1Q14028 1251 aaPredicted RBP29.2■■■□□ 2.26
SPG7-214ENST00000566371 MPRIPQ6WCQ1 1025 aa29.19■■■□□ 2.26
SPG7-214ENST00000566371 HSP90AB1P08238 724 aaKnown RBP29.17■■■□□ 2.26
SPG7-214ENST00000566371 PALLDQ8WX93 1383 aa29.14■■■□□ 2.26
SPG7-214ENST00000566371 ZNF530Q6P9A1 599 aaPredicted RBP29.14■■■□□ 2.26
SPG7-214ENST00000566371 PIGBQ92521 554 aa29.14■■■□□ 2.26
SPG7-214ENST00000566371 SMARCC1Q92922 1105 aaPredicted RBP29.14■■■□□ 2.26
SPG7-214ENST00000566371 DCAF5Q96JK2 942 aa29.14■■■□□ 2.26
SPG7-214ENST00000566371 CCNL1Q9UK58 526 aaPredicted RBP29.14■■■□□ 2.26
SPG7-214ENST00000566371 TMOD3Q9NYL9 352 aa29.13■■■□□ 2.25
SPG7-214ENST00000566371 QSER1Q2KHR3 1735 aa29.12■■■□□ 2.25
SPG7-214ENST00000566371 HMGB2P26583 209 aaKnown RBP29.12■■■□□ 2.25
SPG7-214ENST00000566371 ZNF827Q17R98 1081 aa29.12■■■□□ 2.25
SPG7-214ENST00000566371 AKT1S1Q96B36 256 aa29.12■■■□□ 2.25
SPG7-214ENST00000566371 SPON1Q9HCB6 807 aa29.12■■■□□ 2.25
SPG7-214ENST00000566371 ERVV-2B6SEH9 535 aa29.11■■■□□ 2.25
SPG7-214ENST00000566371 KCNQ4P56696 695 aa29.1■■■□□ 2.25
SPG7-214ENST00000566371 C1orf141Q5JVX7 400 aa29.1■■■□□ 2.25
SPG7-214ENST00000566371 CFAP53Q96M91 514 aa29.1■■■□□ 2.25
SPG7-214ENST00000566371 PDGFDQ9GZP0 370 aaPredicted RBP29.1■■■□□ 2.25
SPG7-214ENST00000566371 KDM6AO15550 1401 aaPredicted RBP29.1■■■□□ 2.25
SPG7-214ENST00000566371 C5P01031 1676 aa29.09■■■□□ 2.25
SPG7-214ENST00000566371 HMOX1P09601 288 aa29.09■■■□□ 2.25
SPG7-214ENST00000566371 PPP2R1AP30153 589 aa29.09■■■□□ 2.25
SPG7-214ENST00000566371 ZEB1P37275 1124 aaPredicted RBP29.06■■■□□ 2.24
SPG7-214ENST00000566371 TAF1LQ8IZX4 1826 aa29.05■■■□□ 2.24
SPG7-214ENST00000566371 TUBGCP6Q96RT7 1819 aa29.04■■■□□ 2.24
SPG7-214ENST00000566371 U2SURPO15042 1029 aaKnown RBP29.04■■■□□ 2.24
SPG7-214ENST00000566371 ZBTB7AO95365 584 aa29.03■■■□□ 2.24
SPG7-214ENST00000566371 AKAP4Q5JQC9 854 aa29.03■■■□□ 2.24
SPG7-214ENST00000566371 MTFR1LQ9H019 292 aa29.03■■■□□ 2.24
SPG7-214ENST00000566371 TFCP2L1Q9NZI6 479 aa29.03■■■□□ 2.24
SPG7-214ENST00000566371 SCN11AQ9UI33 1791 aa29.03■■■□□ 2.24
SPG7-214ENST00000566371 ASAP1Q9ULH1 1129 aa29.02■■■□□ 2.24
SPG7-214ENST00000566371 CABP4P57796 275 aa29.01■■■□□ 2.23
SPG7-214ENST00000566371 PNPLA7Q6ZV29 1317 aa29■■■□□ 2.23
SPG7-214ENST00000566371 LOC102724428A0A0B4J2F2 783 aa29■■■□□ 2.23
SPG7-214ENST00000566371 SIK1P57059 783 aa29■■■□□ 2.23
SPG7-214ENST00000566371 ATG3Q9NT62 314 aa29■■■□□ 2.23
SPG7-214ENST00000566371 NUDCQ9Y266 331 aa29■■■□□ 2.23
SPG7-214ENST00000566371 C4BP0C0L5 1744 aa28.99■■■□□ 2.23
SPG7-214ENST00000566371 ZNF831Q5JPB2 1677 aa28.99■■■□□ 2.23
SPG7-214ENST00000566371 MTHFSDQ2M296 383 aaKnown RBP28.98■■■□□ 2.23
SPG7-214ENST00000566371 SLC16A10Q8TF71 515 aa28.98■■■□□ 2.23
SPG7-214ENST00000566371 ADAMTS7Q9UKP4 1686 aa28.97■■■□□ 2.23
SPG7-214ENST00000566371 PTGER2P43116 358 aa28.97■■■□□ 2.23
SPG7-214ENST00000566371 PPP1R1BQ9UD71 204 aaPredicted RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms