RNA–Protein interactions for RNA: ENST00000566067.5

CENPT-222, Transcript of centromere protein T, human

TSL 3

Gene CENPT, Length 631 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CENPT-222	ENST00000566067	ARHGEF25	Q86VW2	580 aa		19.05	■□□□□ 0.64
CENPT-222	ENST00000566067	CPSF1	Q10570	1443 aa	Known RBP	19.05	■□□□□ 0.64
CENPT-222	ENST00000566067	PPIP5K1	Q6PFW1	1433 aa		19.05	■□□□□ 0.64
CENPT-222	ENST00000566067	COL24A1	Q17RW2	1714 aa		19.04	■□□□□ 0.64
CENPT-222	ENST00000566067	MSL1	Q68DK7	614 aa		19.04	■□□□□ 0.64
CENPT-222	ENST00000566067	KCNH5	Q8NCM2	988 aa		19.04	■□□□□ 0.64
CENPT-222	ENST00000566067	SLIT3	O75094	1523 aa		19.04	■□□□□ 0.64
CENPT-222	ENST00000566067	KCNQ4	P56696	695 aa		19.03	■□□□□ 0.64
CENPT-222	ENST00000566067	JMY	Q8N9B5	988 aa		19.03	■□□□□ 0.64
CENPT-222	ENST00000566067	PUS7	Q96PZ0	661 aa	Known RBP	19.03	■□□□□ 0.64
CENPT-222	ENST00000566067	BTAF1	O14981	1849 aa		19.02	■□□□□ 0.63
CENPT-222	ENST00000566067	QSER1	Q2KHR3	1735 aa		19.01	■□□□□ 0.63
CENPT-222	ENST00000566067	IL2RB	P14784	551 aa		19.01	■□□□□ 0.63
CENPT-222	ENST00000566067	COL18A1	P39060	1754 aa		19.01	■□□□□ 0.63
CENPT-222	ENST00000566067	EVC2	Q86UK5	1308 aa		19	■□□□□ 0.63
CENPT-222	ENST00000566067	ABCC6	O95255	1503 aa		19	■□□□□ 0.63
CENPT-222	ENST00000566067	COL23A1	Q86Y22	540 aa	Predicted RBP	19	■□□□□ 0.63
CENPT-222	ENST00000566067	NLRP2	Q9NX02	1062 aa		19	■□□□□ 0.63
CENPT-222	ENST00000566067	WWC3	Q9ULE0	1092 aa		19	■□□□□ 0.63
CENPT-222	ENST00000566067	SYTL4	Q96C24	671 aa	Predicted RBP	18.99	■□□□□ 0.63
CENPT-222	ENST00000566067	CCER2	I3L3R5	266 aa		18.98	■□□□□ 0.63
CENPT-222	ENST00000566067	HTRA3	P83110	453 aa		18.98	■□□□□ 0.63
CENPT-222	ENST00000566067	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.97	■□□□□ 0.63
CENPT-222	ENST00000566067	CABP2	Q9NPB3	220 aa		18.97	■□□□□ 0.63
CENPT-222	ENST00000566067	CABP1	Q9NZU7	370 aa		18.97	■□□□□ 0.63
CENPT-222	ENST00000566067	IGSF1	Q8N6C5	1336 aa		18.97	■□□□□ 0.63
CENPT-222	ENST00000566067	DDX54	Q8TDD1	881 aa	Known RBP	18.96	■□□□□ 0.63
CENPT-222	ENST00000566067	CCNL1	Q9UK58	526 aa	Predicted RBP	18.96	■□□□□ 0.63
CENPT-222	ENST00000566067	KAT6B	Q8WYB5	2073 aa		18.96	■□□□□ 0.63
CENPT-222	ENST00000566067	KTN1	Q86UP2	1357 aa	Known RBP	18.95	■□□□□ 0.62
CENPT-222	ENST00000566067	RBM46	Q8TBY0	533 aa	Known RBP	18.95	■□□□□ 0.62
CENPT-222	ENST00000566067	PRIM1	P49642	420 aa	Known RBP	18.92	■□□□□ 0.62
CENPT-222	ENST00000566067	NMRK2	Q9NPI5	230 aa		18.92	■□□□□ 0.62
CENPT-222	ENST00000566067	WDR90	Q96KV7	1748 aa		18.91	■□□□□ 0.62
CENPT-222	ENST00000566067	FSTL1	Q12841	308 aa		18.91	■□□□□ 0.62
CENPT-222	ENST00000566067	FLAD1	Q8NFF5	587 aa		18.91	■□□□□ 0.62
CENPT-222	ENST00000566067	PANK3	Q9H999	370 aa		18.91	■□□□□ 0.62
CENPT-222	ENST00000566067	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.9	■□□□□ 0.62
CENPT-222	ENST00000566067	PCDH10	Q9P2E7	1040 aa		18.9	■□□□□ 0.62
CENPT-222	ENST00000566067	ERBB3	P21860	1342 aa		18.9	■□□□□ 0.62
CENPT-222	ENST00000566067	TUBGCP6	Q96RT7	1819 aa		18.9	■□□□□ 0.62
CENPT-222	ENST00000566067	RGPD5	Q99666	1765 aa		18.89	■□□□□ 0.61
CENPT-222	ENST00000566067	HMGB2	P26583	209 aa	Known RBP	18.88	■□□□□ 0.61
CENPT-222	ENST00000566067	RALBP1	Q15311	655 aa		18.88	■□□□□ 0.61
CENPT-222	ENST00000566067	KNSTRN	Q9Y448	316 aa		18.88	■□□□□ 0.61
CENPT-222	ENST00000566067	TTC21B	Q7Z4L5	1316 aa		18.88	■□□□□ 0.61
CENPT-222	ENST00000566067	PIK3C2A	O00443	1686 aa		18.88	■□□□□ 0.61
CENPT-222	ENST00000566067	HSPA1A	P0DMV8	641 aa	Known RBP	18.87	■□□□□ 0.61
CENPT-222	ENST00000566067	HSPA1B	P0DMV9	641 aa	Known RBP	18.87	■□□□□ 0.61
CENPT-222	ENST00000566067	ANKRD36B	Q8N2N9	1353 aa		18.87	■□□□□ 0.61
CENPT-222	ENST00000566067	ZNF692	Q9BU19	519 aa	Predicted RBP	18.86	■□□□□ 0.61
CENPT-222	ENST00000566067	ANKRD24	Q8TF21	1146 aa		18.85	■□□□□ 0.61
CENPT-222	ENST00000566067	TTC21A	Q8NDW8	1320 aa		18.84	■□□□□ 0.61
CENPT-222	ENST00000566067	PER1	O15534	1290 aa	Predicted RBP	18.84	■□□□□ 0.61
CENPT-222	ENST00000566067	TMC1	Q8TDI8	760 aa		18.84	■□□□□ 0.61
CENPT-222	ENST00000566067	PCNT	O95613	3336 aa		18.83	■□□□□ 0.61
CENPT-222	ENST00000566067	ARHGAP27	Q6ZUM4	889 aa		18.83	■□□□□ 0.6
CENPT-222	ENST00000566067	NPC1L1	Q9UHC9	1359 aa		18.82	■□□□□ 0.6
CENPT-222	ENST00000566067	NFAT5	O94916	1531 aa		18.81	■□□□□ 0.6
CENPT-222	ENST00000566067	BCS1L	Q9Y276	419 aa		18.81	■□□□□ 0.6
CENPT-222	ENST00000566067	TERF2IP	Q9NYB0	399 aa		18.8	■□□□□ 0.6
CENPT-222	ENST00000566067	NSD2	O96028	1365 aa		18.8	■□□□□ 0.6
CENPT-222	ENST00000566067	KDM2B	Q8NHM5	1336 aa		18.79	■□□□□ 0.6
CENPT-222	ENST00000566067	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.78	■□□□□ 0.6
CENPT-222	ENST00000566067	LY75	O60449	1722 aa		18.78	■□□□□ 0.6
CENPT-222	ENST00000566067	MON2	Q7Z3U7	1717 aa		18.78	■□□□□ 0.6
CENPT-222	ENST00000566067	SMC1B	Q8NDV3	1235 aa		18.78	■□□□□ 0.6
CENPT-222	ENST00000566067	AK7	Q96M32	723 aa		18.78	■□□□□ 0.6
CENPT-222	ENST00000566067	CIC	Q96RK0	1608 aa	Predicted RBP	18.78	■□□□□ 0.6
CENPT-222	ENST00000566067	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.77	■□□□□ 0.6
CENPT-222	ENST00000566067	SLC12A5	Q9H2X9	1139 aa		18.77	■□□□□ 0.6
CENPT-222	ENST00000566067	PHF14	O94880	888 aa		18.76	■□□□□ 0.59
CENPT-222	ENST00000566067	CENPB	P07199	599 aa	Predicted RBP	18.76	■□□□□ 0.59
CENPT-222	ENST00000566067	C9orf131	Q5VYM1	1079 aa		18.75	■□□□□ 0.59
CENPT-222	ENST00000566067	ZCRB1	Q8TBF4	217 aa	Known RBP	18.75	■□□□□ 0.59
CENPT-222	ENST00000566067	PLEKHG2	Q9H7P9	1386 aa		18.75	■□□□□ 0.59
CENPT-222	ENST00000566067	LTV1	Q96GA3	475 aa	Predicted RBP	18.74	■□□□□ 0.59
CENPT-222	ENST00000566067	RRAGC	Q9HB90	399 aa		18.74	■□□□□ 0.59
CENPT-222	ENST00000566067	MRS2	Q9HD23	443 aa		18.74	■□□□□ 0.59
CENPT-222	ENST00000566067	CGNL1	Q0VF96	1302 aa		18.74	■□□□□ 0.59
CENPT-222	ENST00000566067	CNGB1	Q14028	1251 aa	Predicted RBP	18.73	■□□□□ 0.59
CENPT-222	ENST00000566067	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.73	■□□□□ 0.59
CENPT-222	ENST00000566067	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
CENPT-222	ENST00000566067	USP54	Q70EL1	1684 aa		18.73	■□□□□ 0.59
CENPT-222	ENST00000566067	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.72	■□□□□ 0.59
CENPT-222	ENST00000566067	FCHSD2	O94868	740 aa		18.72	■□□□□ 0.59
CENPT-222	ENST00000566067	TGFB2	P61812	414 aa		18.72	■□□□□ 0.59
CENPT-222	ENST00000566067	CC2D1B	Q5T0F9	858 aa	Known RBP	18.72	■□□□□ 0.59
CENPT-222	ENST00000566067	NSD3	Q9BZ95	1437 aa		18.72	■□□□□ 0.59
CENPT-222	ENST00000566067	CD163L1	Q9NR16	1453 aa		18.71	■□□□□ 0.59
CENPT-222	ENST00000566067		A0A0G2JLW4	131 aa		18.71	■□□□□ 0.59
CENPT-222	ENST00000566067	YTHDC1	Q96MU7	727 aa	Known RBP	18.71	■□□□□ 0.59
CENPT-222	ENST00000566067	DOT1L	Q8TEK3	1739 aa		18.71	■□□□□ 0.59
CENPT-222	ENST00000566067	CARD14	Q9BXL6	1004 aa		18.7	■□□□□ 0.58
CENPT-222	ENST00000566067	PALLD	Q8WX93	1383 aa		18.69	■□□□□ 0.58
CENPT-222	ENST00000566067	PXDNL	A1KZ92	1463 aa		18.69	■□□□□ 0.58
CENPT-222	ENST00000566067	KCP	Q6ZWJ8	1503 aa		18.69	■□□□□ 0.58
CENPT-222	ENST00000566067	USP31	Q70CQ4	1352 aa		18.68	■□□□□ 0.58
CENPT-222	ENST00000566067	MMP10	P09238	476 aa		18.68	■□□□□ 0.58
CENPT-222	ENST00000566067	SSFA2	P28290	1259 aa		18.68	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms