RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
PDXDC1-212ENST00000565986 IL13P35225 146 aa17.36■□□□□ 0.37
PDXDC1-212ENST00000565986 BAG6P46379 1132 aa17.36■□□□□ 0.37
PDXDC1-212ENST00000565986 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
PDXDC1-212ENST00000565986 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
PDXDC1-212ENST00000565986 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
PDXDC1-212ENST00000565986 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
PDXDC1-212ENST00000565986 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
PDXDC1-212ENST00000565986 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
PDXDC1-212ENST00000565986 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
PDXDC1-212ENST00000565986 PLEKHG2Q9H7P9 1386 aa17.34■□□□□ 0.37
PDXDC1-212ENST00000565986 NHSQ6T4R5 1651 aa17.33■□□□□ 0.37
PDXDC1-212ENST00000565986 DEFB132Q7Z7B7 95 aa17.33■□□□□ 0.36
PDXDC1-212ENST00000565986 SULT6B1Q6IMI4 303 aa17.32■□□□□ 0.36
PDXDC1-212ENST00000565986 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
PDXDC1-212ENST00000565986 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
PDXDC1-212ENST00000565986 KDRP35968 1356 aa17.31■□□□□ 0.36
PDXDC1-212ENST00000565986 DOT1LQ8TEK3 1739 aa17.31■□□□□ 0.36
PDXDC1-212ENST00000565986 APBA3O96018 575 aa17.31■□□□□ 0.36
PDXDC1-212ENST00000565986 RALBP1Q15311 655 aa17.31■□□□□ 0.36
PDXDC1-212ENST00000565986 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
PDXDC1-212ENST00000565986 BCL11BQ9C0K0 894 aaPredicted RBP17.31■□□□□ 0.36
PDXDC1-212ENST00000565986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■□□□□ 8.5
PDXDC1-212ENST00000565986 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
PDXDC1-212ENST00000565986 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
PDXDC1-212ENST00000565986 CYP27B1O15528 508 aa17.28■□□□□ 0.36
PDXDC1-212ENST00000565986 HMOX1P09601 288 aa17.28■□□□□ 0.36
PDXDC1-212ENST00000565986 EN1Q05925 392 aaPredicted RBP17.28■□□□□ 0.36
PDXDC1-212ENST00000565986 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
PDXDC1-212ENST00000565986 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
PDXDC1-212ENST00000565986 BTAF1O14981 1849 aa17.27■□□□□ 0.36
PDXDC1-212ENST00000565986 KCNQ2O43526 872 aa17.27■□□□□ 0.36
PDXDC1-212ENST00000565986 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
PDXDC1-212ENST00000565986 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
PDXDC1-212ENST00000565986 PTF1AQ7RTS3 328 aa17.27■□□□□ 0.36
PDXDC1-212ENST00000565986 NUDCQ9Y266 331 aa17.27■□□□□ 0.36
PDXDC1-212ENST00000565986 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
PDXDC1-212ENST00000565986 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
PDXDC1-212ENST00000565986 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
PDXDC1-212ENST00000565986 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
PDXDC1-212ENST00000565986 RREB1Q92766 1687 aa17.24■□□□□ 0.35
PDXDC1-212ENST00000565986 PHKG2P15735 406 aa17.24■□□□□ 0.35
PDXDC1-212ENST00000565986 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
PDXDC1-212ENST00000565986 EZH2Q15910 746 aaKnown RBP17.24■□□□□ 0.35
PDXDC1-212ENST00000565986 CAMKK2Q96RR4 588 aa17.24■□□□□ 0.35
PDXDC1-212ENST00000565986 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
PDXDC1-212ENST00000565986 PLSCR1O15162 318 aa17.22■□□□□ 0.35
PDXDC1-212ENST00000565986 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
PDXDC1-212ENST00000565986 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
PDXDC1-212ENST00000565986 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
PDXDC1-212ENST00000565986 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
PDXDC1-212ENST00000565986 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
PDXDC1-212ENST00000565986 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
PDXDC1-212ENST00000565986 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
PDXDC1-212ENST00000565986 ITGB4P16144 1822 aa17.2■□□□□ 0.34
PDXDC1-212ENST00000565986 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
PDXDC1-212ENST00000565986 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
PDXDC1-212ENST00000565986 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
PDXDC1-212ENST00000565986 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
PDXDC1-212ENST00000565986 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
PDXDC1-212ENST00000565986 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
PDXDC1-212ENST00000565986 FCHSD2O94868 740 aa17.16■□□□□ 0.34
PDXDC1-212ENST00000565986 TXNRD1Q16881 649 aa17.16■□□□□ 0.34
PDXDC1-212ENST00000565986 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
PDXDC1-212ENST00000565986 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
PDXDC1-212ENST00000565986 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
PDXDC1-212ENST00000565986 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
PDXDC1-212ENST00000565986 LY75O60449 1722 aa17.14■□□□□ 0.33
PDXDC1-212ENST00000565986 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
PDXDC1-212ENST00000565986 ANP32CO43423 234 aa17.14■□□□□ 0.33
PDXDC1-212ENST00000565986 PALLDQ8WX93 1383 aa17.14■□□□□ 0.33
PDXDC1-212ENST00000565986 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
PDXDC1-212ENST00000565986 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
PDXDC1-212ENST00000565986 NEFMP07197 916 aa17.13■□□□□ 0.33
PDXDC1-212ENST00000565986 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
PDXDC1-212ENST00000565986 PROM2Q8N271 834 aa17.13■□□□□ 0.33
PDXDC1-212ENST00000565986 PIGBQ92521 554 aa17.13■□□□□ 0.33
PDXDC1-212ENST00000565986 CABP4P57796 275 aa17.12■□□□□ 0.33
PDXDC1-212ENST00000565986 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
PDXDC1-212ENST00000565986 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
PDXDC1-212ENST00000565986 ADAMTS7Q9UKP4 1686 aa17.11■□□□□ 0.33
PDXDC1-212ENST00000565986 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDXDC1-212ENST00000565986 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
PDXDC1-212ENST00000565986 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
PDXDC1-212ENST00000565986 MRC1P22897 1456 aa17.11■□□□□ 0.33
PDXDC1-212ENST00000565986 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
PDXDC1-212ENST00000565986 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
PDXDC1-212ENST00000565986 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
PDXDC1-212ENST00000565986 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
PDXDC1-212ENST00000565986 RNMTO43148 476 aaKnown RBP17.09■□□□□ 0.33
PDXDC1-212ENST00000565986 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
PDXDC1-212ENST00000565986 ANO8Q9HCE9 1232 aaPredicted RBP17.09■□□□□ 0.33
PDXDC1-212ENST00000565986 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
PDXDC1-212ENST00000565986 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
PDXDC1-212ENST00000565986 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
PDXDC1-212ENST00000565986 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
PDXDC1-212ENST00000565986 KCNQ4P56696 695 aa17.07■□□□□ 0.32
PDXDC1-212ENST00000565986 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
PDXDC1-212ENST00000565986 SLC52A2Q9HAB3 445 aa17.07■□□□□ 0.32
PDXDC1-212ENST00000565986 LGR6Q9HBX8 967 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms