RNA–Protein interactions for RNA: ENST00000565235.2

CDH16-203, Transcript of cadherin 16, humanhuman

TSL 3

Gene CDH16, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-203ENST00000565235 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
CDH16-203ENST00000565235 PLSCR1O15162 318 aa18.26■□□□□ 0.51
CDH16-203ENST00000565235 STK32BQ9NY57 414 aa18.25■□□□□ 0.51
CDH16-203ENST00000565235 MEGF6O75095 1541 aa18.24■□□□□ 0.51
CDH16-203ENST00000565235 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
CDH16-203ENST00000565235 RGPD3A6NKT7 1758 aaPredicted RBP18.23■□□□□ 0.51
CDH16-203ENST00000565235 RGPD4Q7Z3J3 1758 aa18.23■□□□□ 0.51
CDH16-203ENST00000565235 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
CDH16-203ENST00000565235 ZCRB1Q8TBF4 217 aaKnown RBP18.23■□□□□ 0.51
CDH16-203ENST00000565235 PCDH11XQ9BZA7 1347 aa18.22■□□□□ 0.51
CDH16-203ENST00000565235 PCDH11YQ9BZA8 1340 aa18.22■□□□□ 0.51
CDH16-203ENST00000565235 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
CDH16-203ENST00000565235 ZBTB7AO95365 584 aa18.21■□□□□ 0.51
CDH16-203ENST00000565235 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
CDH16-203ENST00000565235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDH16-203ENST00000565235 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
CDH16-203ENST00000565235 NHSQ6T4R5 1651 aa18.2■□□□□ 0.5
CDH16-203ENST00000565235 EYA1Q99502 592 aa18.19■□□□□ 0.5
CDH16-203ENST00000565235 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
CDH16-203ENST00000565235 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
CDH16-203ENST00000565235 USHBP1Q8N6Y0 703 aa18.18■□□□□ 0.5
CDH16-203ENST00000565235 RGPD2P0DJD1 1756 aa18.17■□□□□ 0.5
CDH16-203ENST00000565235 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
CDH16-203ENST00000565235 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
CDH16-203ENST00000565235 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
CDH16-203ENST00000565235 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
CDH16-203ENST00000565235 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
CDH16-203ENST00000565235 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
CDH16-203ENST00000565235 RREB1Q92766 1687 aa18.15■□□□□ 0.5
CDH16-203ENST00000565235 MTHFSP49914 203 aa18.15■□□□□ 0.5
CDH16-203ENST00000565235 KDRP35968 1356 aa18.15■□□□□ 0.5
CDH16-203ENST00000565235 SLC15A2Q16348 729 aa18.14■□□□□ 0.49
CDH16-203ENST00000565235 SHANK3Q9BYB0 1731 aa18.14■□□□□ 0.49
CDH16-203ENST00000565235 IL13P35225 146 aa18.12■□□□□ 0.49
CDH16-203ENST00000565235 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
CDH16-203ENST00000565235 MTFR1LQ9H019 292 aa18.12■□□□□ 0.49
CDH16-203ENST00000565235 HMGB2P26583 209 aaKnown RBP18.11■□□□□ 0.49
CDH16-203ENST00000565235 AMOTQ4VCS5 1084 aa18.11■□□□□ 0.49
CDH16-203ENST00000565235 NUP188Q5SRE5 1749 aa18.11■□□□□ 0.49
CDH16-203ENST00000565235 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
CDH16-203ENST00000565235 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
CDH16-203ENST00000565235 PROM2Q8N271 834 aa18.1■□□□□ 0.49
CDH16-203ENST00000565235 ACSBG1Q96GR2 724 aa18.1■□□□□ 0.49
CDH16-203ENST00000565235 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
CDH16-203ENST00000565235 FHDC1Q9C0D6 1143 aaPredicted RBP18.1■□□□□ 0.49
CDH16-203ENST00000565235 PDGFDQ9GZP0 370 aaPredicted RBP18.1■□□□□ 0.49
CDH16-203ENST00000565235 CYP27B1O15528 508 aa18.09■□□□□ 0.49
CDH16-203ENST00000565235 IFNL2Q8IZJ0 200 aa18.09■□□□□ 0.49
CDH16-203ENST00000565235 COL3A1P02461 1466 aaPredicted RBP18.08■□□□□ 0.49
CDH16-203ENST00000565235 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
CDH16-203ENST00000565235 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
CDH16-203ENST00000565235 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
CDH16-203ENST00000565235 SYT17Q9BSW7 474 aa18.08■□□□□ 0.48
CDH16-203ENST00000565235 DOT1LQ8TEK3 1739 aa18.08■□□□□ 0.48
CDH16-203ENST00000565235 ARXQ96QS3 562 aa18.07■□□□□ 0.48
CDH16-203ENST00000565235 PHKG2P15735 406 aa18.06■□□□□ 0.48
CDH16-203ENST00000565235 PTGER2P43116 358 aa18.06■□□□□ 0.48
CDH16-203ENST00000565235 PRIM1P49642 420 aaKnown RBP18.06■□□□□ 0.48
CDH16-203ENST00000565235 GPR162Q16538 588 aa18.06■□□□□ 0.48
CDH16-203ENST00000565235 SLC27A3Q5K4L6 730 aa18.06■□□□□ 0.48
CDH16-203ENST00000565235 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
CDH16-203ENST00000565235 ZNF784Q8NCA9 323 aaPredicted RBP18.06■□□□□ 0.48
CDH16-203ENST00000565235 BTAF1O14981 1849 aa18.05■□□□□ 0.48
CDH16-203ENST00000565235 POLD1P28340 1107 aa18.05■□□□□ 0.48
CDH16-203ENST00000565235 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
CDH16-203ENST00000565235 PPP2R1AP30153 589 aa18.04■□□□□ 0.48
CDH16-203ENST00000565235 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
CDH16-203ENST00000565235 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
CDH16-203ENST00000565235 DCAF5Q96JK2 942 aa18.03■□□□□ 0.48
CDH16-203ENST00000565235 NUDCQ9Y266 331 aa18.03■□□□□ 0.48
CDH16-203ENST00000565235 RALBP1Q15311 655 aa18.02■□□□□ 0.48
CDH16-203ENST00000565235 C1orf141Q5JVX7 400 aa18.02■□□□□ 0.48
CDH16-203ENST00000565235 AEBP1Q8IUX7 1158 aa18.02■□□□□ 0.48
CDH16-203ENST00000565235 SMARCC1Q92922 1105 aaPredicted RBP18.02■□□□□ 0.48
CDH16-203ENST00000565235 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
CDH16-203ENST00000565235 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
CDH16-203ENST00000565235 PAPPAQ13219 1627 aa18■□□□□ 0.47
CDH16-203ENST00000565235 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
CDH16-203ENST00000565235 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
CDH16-203ENST00000565235 TMOD3Q9NYL9 352 aa17.99■□□□□ 0.47
CDH16-203ENST00000565235 DDX10Q13206 875 aaKnown RBP17.98■□□□□ 0.47
CDH16-203ENST00000565235 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
CDH16-203ENST00000565235 TFCP2L1Q9NZI6 479 aa17.98■□□□□ 0.47
CDH16-203ENST00000565235 PALLDQ8WX93 1383 aa17.98■□□□□ 0.47
CDH16-203ENST00000565235 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
CDH16-203ENST00000565235 MSH5O43196 834 aa17.97■□□□□ 0.47
CDH16-203ENST00000565235 MPRIPQ6WCQ1 1025 aa17.97■□□□□ 0.47
CDH16-203ENST00000565235 SLC16A10Q8TF71 515 aa17.97■□□□□ 0.47
CDH16-203ENST00000565235 LY75O60449 1722 aa17.97■□□□□ 0.47
CDH16-203ENST00000565235 HMOX1P09601 288 aa17.96■□□□□ 0.47
CDH16-203ENST00000565235 KDM6AO15550 1401 aaPredicted RBP17.96■□□□□ 0.47
CDH16-203ENST00000565235 C1QTNF8P60827 252 aa17.95■□□□□ 0.46
CDH16-203ENST00000565235 GAS2L2Q8NHY3 880 aa17.95■□□□□ 0.46
CDH16-203ENST00000565235 PIGBQ92521 554 aa17.95■□□□□ 0.46
CDH16-203ENST00000565235 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
CDH16-203ENST00000565235 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
CDH16-203ENST00000565235 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
CDH16-203ENST00000565235 FCHSD2O94868 740 aa17.93■□□□□ 0.46
CDH16-203ENST00000565235 ZNF827Q17R98 1081 aa17.93■□□□□ 0.46
CDH16-203ENST00000565235 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms