RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 IFT57Q9NWB7 429 aa14.63□□□□□ -0.07
SNX29-204ENST00000564791 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
SNX29-204ENST00000564791 MEGF6O75095 1541 aa14.62□□□□□ -0.07
SNX29-204ENST00000564791 ZNF853P0CG23 659 aa14.62□□□□□ -0.07
SNX29-204ENST00000564791 RRP1P56182 461 aaKnown RBP14.62□□□□□ -0.07
SNX29-204ENST00000564791 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
SNX29-204ENST00000564791 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
SNX29-204ENST00000564791 GNAT3A8MTJ3 354 aa14.61□□□□□ -0.07
SNX29-204ENST00000564791 GNAI1P63096 354 aa14.61□□□□□ -0.07
SNX29-204ENST00000564791 PLEKHO1Q53GL0 409 aaPredicted RBP14.61□□□□□ -0.07
SNX29-204ENST00000564791 CRB1P82279 1406 aa14.61□□□□□ -0.07
SNX29-204ENST00000564791 PARP4Q9UKK3 1724 aaKnown RBP14.61□□□□□ -0.07
SNX29-204ENST00000564791 HTATSF1O43719 755 aaKnown RBP14.6□□□□□ -0.07
SNX29-204ENST00000564791 AMOTQ4VCS5 1084 aa14.6□□□□□ -0.07
SNX29-204ENST00000564791 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
SNX29-204ENST00000564791 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
SNX29-204ENST00000564791 EXOSC9Q06265 439 aaKnown RBP14.59□□□□□ -0.07
SNX29-204ENST00000564791 TOM1L2Q6ZVM7 507 aa14.59□□□□□ -0.07
SNX29-204ENST00000564791 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
SNX29-204ENST00000564791 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
SNX29-204ENST00000564791 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
SNX29-204ENST00000564791 LARP1Q6PKG0 1096 aaKnown RBP14.59□□□□□ -0.07
SNX29-204ENST00000564791 MBIPQ9NS73 344 aa14.59□□□□□ -0.07
SNX29-204ENST00000564791 BTG4Q9NY30 223 aa14.59□□□□□ -0.07
SNX29-204ENST00000564791 NRAPQ86VF7 1730 aa14.59□□□□□ -0.07
SNX29-204ENST00000564791 EVA1CP58658 441 aa14.58□□□□□ -0.08
SNX29-204ENST00000564791 PLEKHG2Q9H7P9 1386 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 JCADQ9P266 1359 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 NUTM2BA6NNL0 878 aaPredicted RBP14.57□□□□□ -0.08
SNX29-204ENST00000564791 NUTM2EB1AL46 878 aaPredicted RBP14.57□□□□□ -0.08
SNX29-204ENST00000564791 ADAMTS2O95450 1211 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 AKAP4Q5JQC9 854 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 NUTM2AQ8IVF1 878 aaPredicted RBP14.57□□□□□ -0.08
SNX29-204ENST00000564791 IL17REQ8NFR9 667 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 CARD10Q9BWT7 1032 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 OVOS2A0A0G2JMS6 1433 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 ADAMTS7Q9UKP4 1686 aa14.57□□□□□ -0.08
SNX29-204ENST00000564791 CEMIPQ8WUJ3 1361 aa14.56□□□□□ -0.08
SNX29-204ENST00000564791 NWD2Q9ULI1 1742 aa14.56□□□□□ -0.08
SNX29-204ENST00000564791 CHL1O00533 1208 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 PLIN1O60240 522 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 BCAR3O75815 825 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 CT47B1P0C2W7 299 aaPredicted RBP14.55□□□□□ -0.08
SNX29-204ENST00000564791 RARSP54136 660 aaKnown RBP14.55□□□□□ -0.08
SNX29-204ENST00000564791 C1orf141Q5JVX7 400 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 SCN11AQ9UI33 1791 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 WNK3Q9BYP7 1800 aa14.55□□□□□ -0.08
SNX29-204ENST00000564791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNX29-204ENST00000564791 SIPA1L3O60292 1781 aaPredicted RBP14.54□□□□□ -0.08
SNX29-204ENST00000564791 LGR6Q9HBX8 967 aa14.54□□□□□ -0.08
SNX29-204ENST00000564791 SPG7Q9UQ90 795 aa14.54□□□□□ -0.08
SNX29-204ENST00000564791 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
SNX29-204ENST00000564791 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
SNX29-204ENST00000564791 KDM3BQ7LBC6 1761 aa14.53□□□□□ -0.08
SNX29-204ENST00000564791 RNMTO43148 476 aaKnown RBP14.52□□□□□ -0.08
SNX29-204ENST00000564791 TSPYL6Q8N831 410 aa14.52□□□□□ -0.08
SNX29-204ENST00000564791 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.08
SNX29-204ENST00000564791 TSPYL4Q9UJ04 414 aa14.52□□□□□ -0.08
SNX29-204ENST00000564791 SLIT2O94813 1529 aa14.52□□□□□ -0.09
SNX29-204ENST00000564791 IL2RBP14784 551 aa14.52□□□□□ -0.09
SNX29-204ENST00000564791 PHKG2P15735 406 aa14.52□□□□□ -0.09
SNX29-204ENST00000564791 HSPA1LP34931 641 aa14.52□□□□□ -0.09
SNX29-204ENST00000564791 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.09
SNX29-204ENST00000564791 C8orf58Q8NAV2 365 aa14.52□□□□□ -0.09
SNX29-204ENST00000564791 KDM6AO15550 1401 aaPredicted RBP14.51□□□□□ -0.09
SNX29-204ENST00000564791 LRP6O75581 1613 aa14.51□□□□□ -0.09
SNX29-204ENST00000564791 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
SNX29-204ENST00000564791 ERICH6BQ5W0A0 696 aa14.51□□□□□ -0.09
SNX29-204ENST00000564791 USP35Q9P2H5 1018 aa14.51□□□□□ -0.09
SNX29-204ENST00000564791 CYP27B1O15528 508 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 VAMP4O75379 141 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 KRT24Q2M2I5 525 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 TWISTNBQ3B726 338 aaPredicted RBP14.5□□□□□ -0.09
SNX29-204ENST00000564791 IFNL2Q8IZJ0 200 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 SSH1Q8WYL5 1049 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 DISP2A7MBM2 1401 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 SPATA31A6Q5VVP1 1343 aa14.5□□□□□ -0.09
SNX29-204ENST00000564791 ELL2O00472 640 aaPredicted RBP14.49□□□□□ -0.09
SNX29-204ENST00000564791 TEFQ10587 303 aa14.49□□□□□ -0.09
SNX29-204ENST00000564791 C20orf194Q5TEA3 1177 aa14.49□□□□□ -0.09
SNX29-204ENST00000564791 ZCRB1Q8TBF4 217 aaKnown RBP14.49□□□□□ -0.09
SNX29-204ENST00000564791 SMC4Q9NTJ3 1288 aa14.49□□□□□ -0.09
SNX29-204ENST00000564791 BABAM1Q9NWV8 329 aa14.49□□□□□ -0.09
SNX29-204ENST00000564791 PCDH11XQ9BZA7 1347 aa14.48□□□□□ -0.09
SNX29-204ENST00000564791 PCDH11YQ9BZA8 1340 aa14.48□□□□□ -0.09
SNX29-204ENST00000564791 MRC1P22897 1456 aa14.48□□□□□ -0.09
SNX29-204ENST00000564791 CANXP27824 592 aaKnown RBP14.48□□□□□ -0.09
SNX29-204ENST00000564791 ALDH1L2Q3SY69 923 aa14.48□□□□□ -0.09
SNX29-204ENST00000564791 FRAT1Q92837 279 aaPredicted RBP14.48□□□□□ -0.09
SNX29-204ENST00000564791 ZNF428Q96B54 188 aa14.48□□□□□ -0.09
SNX29-204ENST00000564791 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
SNX29-204ENST00000564791 HSP90AB1P08238 724 aaKnown RBP14.46□□□□□ -0.09
SNX29-204ENST00000564791 DCAF5Q96JK2 942 aa14.46□□□□□ -0.09
SNX29-204ENST00000564791 C8orf37Q96NL8 207 aa14.46□□□□□ -0.09
SNX29-204ENST00000564791 CRBNQ96SW2 442 aa14.46□□□□□ -0.09
SNX29-204ENST00000564791 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.45□□□□□ -0.1
SNX29-204ENST00000564791 SPATA31A1Q5TZJ5 1347 aa14.45□□□□□ -0.1
SNX29-204ENST00000564791 TOGARAM1Q9Y4F4 1720 aa14.45□□□□□ -0.1
SNX29-204ENST00000564791 BTBD11A6QL63 1104 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms