RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
CDH1-207ENST00000564745 LGR5O75473 907 aa8.71□□□□□ -1.02
CDH1-207ENST00000564745 BRD1O95696 1058 aa8.71□□□□□ -1.02
CDH1-207ENST00000564745 SFI1A8K8P3 1242 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 STAU1O95793 577 aaKnown RBP8.7□□□□□ -1.02
CDH1-207ENST00000564745 ATP1A2P50993 1020 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 USP4Q13107 963 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 CCDC102BQ68D86 513 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 TPCN2Q8NHX9 752 aa8.7□□□□□ -1.02
CDH1-207ENST00000564745 WNT7AO00755 349 aa8.69□□□□□ -1.02
CDH1-207ENST00000564745 NR3C2P08235 984 aa8.69□□□□□ -1.02
CDH1-207ENST00000564745 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
CDH1-207ENST00000564745 SIX5Q8N196 739 aa8.69□□□□□ -1.02
CDH1-207ENST00000564745 GZF1Q9H116 711 aaPredicted RBP8.69□□□□□ -1.02
CDH1-207ENST00000564745 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
CDH1-207ENST00000564745 PSME1Q06323 249 aa8.68□□□□□ -1.02
CDH1-207ENST00000564745 ADH1CP00326 375 aa8.67□□□□□ -1.02
CDH1-207ENST00000564745 SCNN1AP37088 669 aa8.67□□□□□ -1.02
CDH1-207ENST00000564745 FOXC1Q12948 553 aa8.67□□□□□ -1.02
CDH1-207ENST00000564745 ZNF784Q8NCA9 323 aaPredicted RBP8.67□□□□□ -1.02
CDH1-207ENST00000564745 OSBPL3Q9H4L5 887 aa8.67□□□□□ -1.02
CDH1-207ENST00000564745 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
CDH1-207ENST00000564745 KCNA1Q09470 495 aa8.66□□□□□ -1.02
CDH1-207ENST00000564745 ZNF697Q5TEC3 545 aa8.66□□□□□ -1.02
CDH1-207ENST00000564745 MPNDQ8N594 471 aa8.66□□□□□ -1.02
CDH1-207ENST00000564745 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
CDH1-207ENST00000564745 PKD2L1Q9P0L9 805 aa8.66□□□□□ -1.02
CDH1-207ENST00000564745 LILRA1O75019 489 aa8.65□□□□□ -1.02
CDH1-207ENST00000564745 MYCP01106 439 aaPredicted RBP8.65□□□□□ -1.02
CDH1-207ENST00000564745 SEC13P55735 322 aa8.65□□□□□ -1.02
CDH1-207ENST00000564745 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
CDH1-207ENST00000564745 CC2D2BQ6DHV5 1058 aa8.65□□□□□ -1.02
CDH1-207ENST00000564745 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
CDH1-207ENST00000564745 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
CDH1-207ENST00000564745 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDH1-207ENST00000564745 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.02
CDH1-207ENST00000564745 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.02
CDH1-207ENST00000564745 ALDH1A1P00352 501 aa8.64□□□□□ -1.03
CDH1-207ENST00000564745 SSFA2P28290 1259 aa8.64□□□□□ -1.03
CDH1-207ENST00000564745 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
CDH1-207ENST00000564745 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
CDH1-207ENST00000564745 GAS2L2Q8NHY3 880 aa8.64□□□□□ -1.03
CDH1-207ENST00000564745 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
CDH1-207ENST00000564745 PRKD2Q9BZL6 878 aa8.64□□□□□ -1.03
CDH1-207ENST00000564745 TMEM229AB2RXF0 380 aa8.63□□□□□ -1.03
CDH1-207ENST00000564745 PRMT3O60678 531 aa8.63□□□□□ -1.03
CDH1-207ENST00000564745 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
CDH1-207ENST00000564745 TSEN2Q8NCE0 465 aaKnown RBP8.63□□□□□ -1.03
CDH1-207ENST00000564745 SCNN1DP51172 638 aa8.62□□□□□ -1.03
CDH1-207ENST00000564745 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
CDH1-207ENST00000564745 NR5A1Q13285 461 aa8.62□□□□□ -1.03
CDH1-207ENST00000564745 SWI5Q1ZZU3 235 aa8.62□□□□□ -1.03
CDH1-207ENST00000564745 ZNF358Q9NW07 568 aa8.62□□□□□ -1.03
CDH1-207ENST00000564745 OCLNQ16625 522 aa8.61□□□□□ -1.03
CDH1-207ENST00000564745 HINFPQ9BQA5 517 aa8.61□□□□□ -1.03
CDH1-207ENST00000564745 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
CDH1-207ENST00000564745 J3QL48 77 aa8.6□□□□□ -1.03
CDH1-207ENST00000564745 MYT1Q01538 1121 aa8.6□□□□□ -1.03
CDH1-207ENST00000564745 NNTQ13423 1086 aa8.6□□□□□ -1.03
CDH1-207ENST00000564745 ESF1Q9H501 851 aaKnown RBP8.6□□□□□ -1.03
CDH1-207ENST00000564745 ETNK1Q9HBU6 452 aa8.6□□□□□ -1.03
CDH1-207ENST00000564745 TNFRSF10AO00220 468 aa8.59□□□□□ -1.03
CDH1-207ENST00000564745 GDF9O60383 454 aa8.59□□□□□ -1.03
CDH1-207ENST00000564745 GDF10P55107 478 aa8.59□□□□□ -1.03
CDH1-207ENST00000564745 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
CDH1-207ENST00000564745 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
CDH1-207ENST00000564745 RAB6BQ9NRW1 208 aa8.59□□□□□ -1.03
CDH1-207ENST00000564745 SERTAD1Q9UHV2 236 aa8.59□□□□□ -1.03
CDH1-207ENST00000564745 CBLBQ13191 982 aa8.58□□□□□ -1.04
CDH1-207ENST00000564745 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
CDH1-207ENST00000564745 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
CDH1-207ENST00000564745 GNEQ9Y223 722 aaKnown RBP8.58□□□□□ -1.04
CDH1-207ENST00000564745 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
CDH1-207ENST00000564745 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
CDH1-207ENST00000564745 PATL2C9JE40 543 aaKnown RBP8.57□□□□□ -1.04
CDH1-207ENST00000564745 TMCO4Q5TGY1 634 aa8.57□□□□□ -1.04
CDH1-207ENST00000564745 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
CDH1-207ENST00000564745 TRIM67Q6ZTA4 783 aa8.57□□□□□ -1.04
CDH1-207ENST00000564745 KDF1Q8NAX2 398 aaPredicted RBP8.57□□□□□ -1.04
CDH1-207ENST00000564745 SNIP1Q8TAD8 396 aaKnown RBP8.57□□□□□ -1.04
CDH1-207ENST00000564745 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
CDH1-207ENST00000564745 CXXC1Q9P0U4 656 aaPredicted RBP8.57□□□□□ -1.04
CDH1-207ENST00000564745 CCDC9Q9Y3X0 531 aaKnown RBP8.57□□□□□ -1.04
CDH1-207ENST00000564745 EMILIN1Q9Y6C2 1016 aa8.57□□□□□ -1.04
CDH1-207ENST00000564745 INHAP05111 366 aa8.56□□□□□ -1.04
CDH1-207ENST00000564745 SERPINB4P48594 390 aa8.56□□□□□ -1.04
CDH1-207ENST00000564745 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
CDH1-207ENST00000564745 KLF16Q9BXK1 252 aaPredicted RBP8.56□□□□□ -1.04
CDH1-207ENST00000564745 ZFAND3Q9H8U3 227 aa8.56□□□□□ -1.04
CDH1-207ENST00000564745 ARHGEF10LQ9HCE6 1279 aa8.56□□□□□ -1.04
CDH1-207ENST00000564745 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
CDH1-207ENST00000564745 M0R2N6 131 aa8.55□□□□□ -1.04
CDH1-207ENST00000564745 WEE1P30291 646 aa8.55□□□□□ -1.04
CDH1-207ENST00000564745 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
CDH1-207ENST00000564745 MKNK1Q9BUB5 465 aa8.55□□□□□ -1.04
CDH1-207ENST00000564745 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
CDH1-207ENST00000564745 ZIC2O95409 532 aaPredicted RBP8.54□□□□□ -1.04
CDH1-207ENST00000564745 SMPD1P17405 629 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms