RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 MYT1Q01538 1121 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 FOXC1Q12948 553 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 ADGBQ8N7X0 1667 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 NLRP1Q9C000 1473 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 MBD5Q9P267 1494 aa8.32□□□□□ -1.08
TUBGCP4-209ENST00000564511 RTEL1-TNFRSF6BF6WH68 1400 aa8.31□□□□□ -1.08
TUBGCP4-209ENST00000564511 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
TUBGCP4-209ENST00000564511 KDM5DQ9BY66 1539 aa8.3□□□□□ -1.08
TUBGCP4-209ENST00000564511 FAM187AA6NFU0 413 aa8.3□□□□□ -1.08
TUBGCP4-209ENST00000564511 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
TUBGCP4-209ENST00000564511 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
TUBGCP4-209ENST00000564511 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
TUBGCP4-209ENST00000564511 DEPDC5O75140 1603 aa8.29□□□□□ -1.08
TUBGCP4-209ENST00000564511 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
TUBGCP4-209ENST00000564511 ZNF787Q6DD87 383 aa8.29□□□□□ -1.08
TUBGCP4-209ENST00000564511 IQGAP1P46940 1657 aa8.28□□□□□ -1.08
TUBGCP4-209ENST00000564511 TSPY4P0CV99 314 aa8.28□□□□□ -1.08
TUBGCP4-209ENST00000564511 TSPY10P0CW01 314 aa8.28□□□□□ -1.08
TUBGCP4-209ENST00000564511 AMHR2Q16671 573 aa8.28□□□□□ -1.08
TUBGCP4-209ENST00000564511 TXNDC2Q86VQ3 553 aa8.28□□□□□ -1.08
TUBGCP4-209ENST00000564511 RNF17Q9BXT8 1623 aaKnown RBP8.28□□□□□ -1.08
TUBGCP4-209ENST00000564511 SETD1AO15047 1707 aaKnown RBP8.27□□□□□ -1.09
TUBGCP4-209ENST00000564511 LTKP29376 864 aa8.27□□□□□ -1.09
TUBGCP4-209ENST00000564511 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
TUBGCP4-209ENST00000564511 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
TUBGCP4-209ENST00000564511 STRCP1A6NGW2 1772 aa8.27□□□□□ -1.09
TUBGCP4-209ENST00000564511 PCDHGC3Q9UN70 934 aa8.26□□□□□ -1.09
TUBGCP4-209ENST00000564511 EID1Q9Y6B2 187 aa8.26□□□□□ -1.09
TUBGCP4-209ENST00000564511 FAM135BQ49AJ0 1406 aa8.26□□□□□ -1.09
TUBGCP4-209ENST00000564511 CCDC141Q6ZP82 1450 aa8.26□□□□□ -1.09
TUBGCP4-209ENST00000564511 FDX1P10109 184 aa8.25□□□□□ -1.09
TUBGCP4-209ENST00000564511 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
TUBGCP4-209ENST00000564511 SYNMO15061 1565 aa8.25□□□□□ -1.09
TUBGCP4-209ENST00000564511 TIAM1Q13009 1591 aa8.25□□□□□ -1.09
TUBGCP4-209ENST00000564511 NDUFV2P19404 249 aa8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 TRIM32Q13049 653 aa8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 RETREG3Q86VR2 466 aa8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 SCAF11Q99590 1463 aaKnown RBP8.24□□□□□ -1.09
TUBGCP4-209ENST00000564511 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
TUBGCP4-209ENST00000564511 POTECB2RU33 542 aa8.23□□□□□ -1.09
TUBGCP4-209ENST00000564511 JUNDP17535 347 aa8.23□□□□□ -1.09
TUBGCP4-209ENST00000564511 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
TUBGCP4-209ENST00000564511 TMEM94Q12767 1356 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 ERVK-7P63135 1459 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 WNT7AO00755 349 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 TRIM66O15016 1216 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 ST8SIA5O15466 376 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 SLC26A8Q96RN1 970 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 ABCC3O15438 1527 aa8.22□□□□□ -1.09
TUBGCP4-209ENST00000564511 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.09
TUBGCP4-209ENST00000564511 EHBP1L1Q8N3D4 1523 aa8.21□□□□□ -1.1
TUBGCP4-209ENST00000564511 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
TUBGCP4-209ENST00000564511 AVPP01185 164 aa8.21□□□□□ -1.1
TUBGCP4-209ENST00000564511 KCNA6P17658 529 aa8.21□□□□□ -1.1
TUBGCP4-209ENST00000564511 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
TUBGCP4-209ENST00000564511 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.1
TUBGCP4-209ENST00000564511 NCOA2Q15596 1464 aa8.2□□□□□ -1.1
TUBGCP4-209ENST00000564511 SKOR1P84550 965 aa8.2□□□□□ -1.1
TUBGCP4-209ENST00000564511 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
TUBGCP4-209ENST00000564511 TRIM52Q96A61 297 aa8.2□□□□□ -1.1
TUBGCP4-209ENST00000564511 AK7Q96M32 723 aa8.2□□□□□ -1.1
TUBGCP4-209ENST00000564511 SLAIN2Q9P270 581 aa8.2□□□□□ -1.1
TUBGCP4-209ENST00000564511 ARHGAP23Q9P227 1491 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 SLIT1O75093 1534 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 MS4A1P11836 297 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 BCANQ96GW7 911 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 DACH1Q9UI36 760 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 UBR1Q8IWV7 1749 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 JCADQ9P266 1359 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
TUBGCP4-209ENST00000564511 ROBO1Q9Y6N7 1651 aa8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 XIRP1Q702N8 1843 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 SMPD1P17405 629 aa8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 RC3H1Q5TC82 1133 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 MEX3CQ5U5Q3 659 aaKnown RBP8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 CRIPAKQ8N1N5 446 aa8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
TUBGCP4-209ENST00000564511 J3QL48 77 aa8.17□□□□□ -1.1
TUBGCP4-209ENST00000564511 IDI1Q13907 227 aa8.17□□□□□ -1.1
TUBGCP4-209ENST00000564511 ZNF772Q68DY9 489 aaPredicted RBP8.17□□□□□ -1.1
TUBGCP4-209ENST00000564511 MSH6P52701 1360 aa8.17□□□□□ -1.1
TUBGCP4-209ENST00000564511 ARHGEF5Q12774 1597 aa8.17□□□□□ -1.1
TUBGCP4-209ENST00000564511 WNT7BP56706 349 aa8.16□□□□□ -1.1
TUBGCP4-209ENST00000564511 LRRC9Q6ZRR7 1453 aa8.16□□□□□ -1.1
TUBGCP4-209ENST00000564511 CFAP65Q6ZU64 1925 aaKnown RBP8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 MAP3K1Q13233 1512 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms