RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
NSMCE1-207ENST00000564342 RTL1A6NKG5 1358 aa11.39□□□□□ -0.59
NSMCE1-207ENST00000564342 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-207ENST00000564342 HOXC9P31274 260 aa11.38□□□□□ -0.59
NSMCE1-207ENST00000564342 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
NSMCE1-207ENST00000564342 DDB1Q16531 1140 aa11.38□□□□□ -0.59
NSMCE1-207ENST00000564342 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
NSMCE1-207ENST00000564342 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
NSMCE1-207ENST00000564342 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
NSMCE1-207ENST00000564342 TNS2Q63HR2 1409 aa11.37□□□□□ -0.59
NSMCE1-207ENST00000564342 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
NSMCE1-207ENST00000564342 NLRP2Q9NX02 1062 aa11.37□□□□□ -0.59
NSMCE1-207ENST00000564342 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 BAG6P46379 1132 aa11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 AMPHP49418 695 aa11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 PANK3Q9H999 370 aa11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 RREB1Q92766 1687 aa11.36□□□□□ -0.59
NSMCE1-207ENST00000564342 KIF7Q2M1P5 1343 aa11.35□□□□□ -0.59
NSMCE1-207ENST00000564342 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
NSMCE1-207ENST00000564342 TRIM37O94972 964 aa11.35□□□□□ -0.59
NSMCE1-207ENST00000564342 MARCH10Q8NA82 808 aaPredicted RBP11.35□□□□□ -0.59
NSMCE1-207ENST00000564342 BCL9O00512 1426 aa11.35□□□□□ -0.59
NSMCE1-207ENST00000564342 RGPD3A6NKT7 1758 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-207ENST00000564342 RGPD4Q7Z3J3 1758 aa11.34□□□□□ -0.59
NSMCE1-207ENST00000564342 INSRP06213 1382 aa11.34□□□□□ -0.59
NSMCE1-207ENST00000564342 FLT4P35916 1363 aa11.34□□□□□ -0.59
NSMCE1-207ENST00000564342 IL2RBP14784 551 aa11.34□□□□□ -0.59
NSMCE1-207ENST00000564342 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
NSMCE1-207ENST00000564342 NHSQ6T4R5 1651 aa11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 NUP188Q5SRE5 1749 aa11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 EXOC5O00471 708 aa11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
NSMCE1-207ENST00000564342 NSD2O96028 1365 aa11.32□□□□□ -0.6
NSMCE1-207ENST00000564342 MEGF6O75095 1541 aa11.32□□□□□ -0.6
NSMCE1-207ENST00000564342 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
NSMCE1-207ENST00000564342 APBA3O96018 575 aa11.31□□□□□ -0.6
NSMCE1-207ENST00000564342 EZH2Q15910 746 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-207ENST00000564342 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
NSMCE1-207ENST00000564342 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
NSMCE1-207ENST00000564342 CAMKK2Q96RR4 588 aa11.31□□□□□ -0.6
NSMCE1-207ENST00000564342 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
NSMCE1-207ENST00000564342 NCAPD2Q15021 1401 aa11.3□□□□□ -0.6
NSMCE1-207ENST00000564342 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
NSMCE1-207ENST00000564342 POLKQ9UBT6 870 aa11.3□□□□□ -0.6
NSMCE1-207ENST00000564342 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
NSMCE1-207ENST00000564342 WASHC2AQ641Q2 1341 aa11.29□□□□□ -0.6
NSMCE1-207ENST00000564342 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
NSMCE1-207ENST00000564342 BTAF1O14981 1849 aa11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 TNNT2P45379 298 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
NSMCE1-207ENST00000564342 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-207ENST00000564342 PLSCR1O15162 318 aa11.26□□□□□ -0.61
NSMCE1-207ENST00000564342 KCNQ2O43526 872 aa11.26□□□□□ -0.61
NSMCE1-207ENST00000564342 MORC1Q86VD1 984 aa11.26□□□□□ -0.61
NSMCE1-207ENST00000564342 ZCRB1Q8TBF4 217 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-207ENST00000564342 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-207ENST00000564342 RAPGEF4Q8WZA2 1011 aa11.25□□□□□ -0.61
NSMCE1-207ENST00000564342 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
NSMCE1-207ENST00000564342 TOGARAM1Q9Y4F4 1720 aa11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 TATP17735 454 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 EYA1Q99502 592 aa11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 KAT6BQ8WYB5 2073 aa11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 LRP5O75197 1615 aa11.24□□□□□ -0.61
NSMCE1-207ENST00000564342 NPC1L1Q9UHC9 1359 aa11.23□□□□□ -0.61
NSMCE1-207ENST00000564342 LY75O60449 1722 aa11.23□□□□□ -0.61
NSMCE1-207ENST00000564342 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
NSMCE1-207ENST00000564342 ITGB4P16144 1822 aa11.22□□□□□ -0.61
NSMCE1-207ENST00000564342 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
NSMCE1-207ENST00000564342 R3HDM1Q15032 1099 aaKnown RBP11.22□□□□□ -0.61
NSMCE1-207ENST00000564342 PROM2Q8N271 834 aa11.22□□□□□ -0.61
NSMCE1-207ENST00000564342 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
NSMCE1-207ENST00000564342 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
NSMCE1-207ENST00000564342 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
NSMCE1-207ENST00000564342 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
NSMCE1-207ENST00000564342 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.61
NSMCE1-207ENST00000564342 CYP27B1O15528 508 aa11.2□□□□□ -0.62
NSMCE1-207ENST00000564342 NBPF14Q5TI25 921 aa11.2□□□□□ -0.62
NSMCE1-207ENST00000564342 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
NSMCE1-207ENST00000564342 PLEKHG2Q9H7P9 1386 aa11.19□□□□□ -0.62
NSMCE1-207ENST00000564342 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-207ENST00000564342 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-207ENST00000564342 IL13P35225 146 aa11.18□□□□□ -0.62
NSMCE1-207ENST00000564342 MTHFSP49914 203 aa11.18□□□□□ -0.62
NSMCE1-207ENST00000564342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
NSMCE1-207ENST00000564342 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
NSMCE1-207ENST00000564342 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-207ENST00000564342 KDRP35968 1356 aa11.17□□□□□ -0.62
NSMCE1-207ENST00000564342 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-207ENST00000564342 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms