RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
CBFB-204ENST00000563939 SYTL4Q96C24 671 aaPredicted RBP26.18■■□□□ 1.78
CBFB-204ENST00000563939 SBF2Q86WG5 1849 aa26.17■■□□□ 1.78
CBFB-204ENST00000563939 PER1O15534 1290 aaPredicted RBP26.17■■□□□ 1.78
CBFB-204ENST00000563939 EIF4A2Q14240 407 aaKnown RBP26.17■■□□□ 1.78
CBFB-204ENST00000563939 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
CBFB-204ENST00000563939 PRIM1P49642 420 aaKnown RBP26.16■■□□□ 1.78
CBFB-204ENST00000563939 CC2D1BQ5T0F9 858 aaKnown RBP26.16■■□□□ 1.78
CBFB-204ENST00000563939 PROM2Q8N271 834 aa26.16■■□□□ 1.78
CBFB-204ENST00000563939 TXNRD1Q16881 649 aa26.15■■□□□ 1.78
CBFB-204ENST00000563939 ANKRD26Q9UPS8 1709 aa26.13■■□□□ 1.77
CBFB-204ENST00000563939 SPG7Q9UQ90 795 aa26.11■■□□□ 1.77
CBFB-204ENST00000563939 PCDH11XQ9BZA7 1347 aa26.11■■□□□ 1.77
CBFB-204ENST00000563939 PCDH11YQ9BZA8 1340 aa26.11■■□□□ 1.77
CBFB-204ENST00000563939 KAT6BQ8WYB5 2073 aa26.09■■□□□ 1.77
CBFB-204ENST00000563939 CYP27B1O15528 508 aa26.07■■□□□ 1.76
CBFB-204ENST00000563939 MTHFSP49914 203 aa26.07■■□□□ 1.76
CBFB-204ENST00000563939 NHSQ6T4R5 1651 aa26.06■■□□□ 1.76
CBFB-204ENST00000563939 RREB1Q92766 1687 aa26.06■■□□□ 1.76
CBFB-204ENST00000563939 STK32BQ9NY57 414 aa26.05■■□□□ 1.76
CBFB-204ENST00000563939 SRCAPQ6ZRS2 3230 aa26.05■■□□□ 1.76
CBFB-204ENST00000563939 ANO8Q9HCE9 1232 aaPredicted RBP26.04■■□□□ 1.76
CBFB-204ENST00000563939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.04■■□□□ 1.76
CBFB-204ENST00000563939 NUP188Q5SRE5 1749 aa26.04■■□□□ 1.76
CBFB-204ENST00000563939 NCAPD2Q15021 1401 aa26.04■■□□□ 1.76
CBFB-204ENST00000563939 IGSF1Q8N6C5 1336 aa26.03■■□□□ 1.76
CBFB-204ENST00000563939 IL13P35225 146 aa26.01■■□□□ 1.75
CBFB-204ENST00000563939 MPRIPQ6WCQ1 1025 aa26.01■■□□□ 1.75
CBFB-204ENST00000563939 SULT6B1Q6IMI4 303 aa26■■□□□ 1.75
CBFB-204ENST00000563939 IFNL2Q8IZJ0 200 aa26■■□□□ 1.75
CBFB-204ENST00000563939 RGPD3A6NKT7 1758 aaPredicted RBP26■■□□□ 1.75
CBFB-204ENST00000563939 RGPD4Q7Z3J3 1758 aa26■■□□□ 1.75
CBFB-204ENST00000563939 NPC1L1Q9UHC9 1359 aa25.99■■□□□ 1.75
CBFB-204ENST00000563939 SLC15A2Q16348 729 aa25.99■■□□□ 1.75
CBFB-204ENST00000563939 PLEKHO1Q53GL0 409 aaPredicted RBP25.99■■□□□ 1.75
CBFB-204ENST00000563939 LRRC4BQ9NT99 713 aa25.99■■□□□ 1.75
CBFB-204ENST00000563939 SHANK3Q9BYB0 1731 aa25.98■■□□□ 1.75
CBFB-204ENST00000563939 KCNQ4P56696 695 aa25.98■■□□□ 1.75
CBFB-204ENST00000563939 NKX1-1Q15270 411 aaPredicted RBP25.98■■□□□ 1.75
CBFB-204ENST00000563939 SLC27A3Q5K4L6 730 aa25.98■■□□□ 1.75
CBFB-204ENST00000563939 AEBP1Q8IUX7 1158 aa25.98■■□□□ 1.75
CBFB-204ENST00000563939 BTAF1O14981 1849 aa25.98■■□□□ 1.75
CBFB-204ENST00000563939 PHKG2P15735 406 aa25.97■■□□□ 1.75
CBFB-204ENST00000563939 DIAPH1O60610 1272 aaKnown RBP25.95■■□□□ 1.74
CBFB-204ENST00000563939 AMOTQ4VCS5 1084 aa25.94■■□□□ 1.74
CBFB-204ENST00000563939 PDGFDQ9GZP0 370 aaPredicted RBP25.94■■□□□ 1.74
CBFB-204ENST00000563939 SPON1Q9HCB6 807 aa25.94■■□□□ 1.74
CBFB-204ENST00000563939 CCNL1Q9UK58 526 aaPredicted RBP25.94■■□□□ 1.74
CBFB-204ENST00000563939 DOT1LQ8TEK3 1739 aa25.94■■□□□ 1.74
CBFB-204ENST00000563939 ZNF530Q6P9A1 599 aaPredicted RBP25.93■■□□□ 1.74
CBFB-204ENST00000563939 PIGBQ92521 554 aa25.92■■□□□ 1.74
CBFB-204ENST00000563939 HMOX1P09601 288 aa25.91■■□□□ 1.74
CBFB-204ENST00000563939 TMOD3Q9NYL9 352 aa25.91■■□□□ 1.74
CBFB-204ENST00000563939 ZBTB7AO95365 584 aa25.9■■□□□ 1.74
CBFB-204ENST00000563939 ZNF827Q17R98 1081 aa25.9■■□□□ 1.74
CBFB-204ENST00000563939 SMARCC1Q92922 1105 aaPredicted RBP25.9■■□□□ 1.74
CBFB-204ENST00000563939 PKD1L3Q7Z443 1732 aa25.9■■□□□ 1.74
CBFB-204ENST00000563939 HSP90AB1P08238 724 aaKnown RBP25.89■■□□□ 1.74
CBFB-204ENST00000563939 C1orf141Q5JVX7 400 aa25.89■■□□□ 1.74
CBFB-204ENST00000563939 TFCP2L1Q9NZI6 479 aa25.88■■□□□ 1.73
CBFB-204ENST00000563939 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
CBFB-204ENST00000563939 ATF5Q9Y2D1 282 aaPredicted RBP25.88■■□□□ 1.73
CBFB-204ENST00000563939 PLEKHG2Q9H7P9 1386 aa25.87■■□□□ 1.73
CBFB-204ENST00000563939 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
CBFB-204ENST00000563939 AKT1S1Q96B36 256 aa25.87■■□□□ 1.73
CBFB-204ENST00000563939 DCAF5Q96JK2 942 aa25.87■■□□□ 1.73
CBFB-204ENST00000563939 PALLDQ8WX93 1383 aa25.86■■□□□ 1.73
CBFB-204ENST00000563939 LRP5O75197 1615 aa25.86■■□□□ 1.73
CBFB-204ENST00000563939 CFAP53Q96M91 514 aa25.86■■□□□ 1.73
CBFB-204ENST00000563939 KDRP35968 1356 aa25.85■■□□□ 1.73
CBFB-204ENST00000563939 ERVV-2B6SEH9 535 aa25.84■■□□□ 1.73
CBFB-204ENST00000563939 ASAP1Q9ULH1 1129 aa25.84■■□□□ 1.73
CBFB-204ENST00000563939 HMGB2P26583 209 aaKnown RBP25.83■■□□□ 1.73
CBFB-204ENST00000563939 PPP2R1AP30153 589 aa25.83■■□□□ 1.73
CBFB-204ENST00000563939 CABP4P57796 275 aa25.83■■□□□ 1.73
CBFB-204ENST00000563939 MTFR1LQ9H019 292 aa25.8■■□□□ 1.72
CBFB-204ENST00000563939 ATG3Q9NT62 314 aa25.8■■□□□ 1.72
CBFB-204ENST00000563939 MSH5O43196 834 aa25.79■■□□□ 1.72
CBFB-204ENST00000563939 TOGARAM1Q9Y4F4 1720 aa25.78■■□□□ 1.72
CBFB-204ENST00000563939 LOC102724428A0A0B4J2F2 783 aa25.78■■□□□ 1.72
CBFB-204ENST00000563939 SIK1P57059 783 aa25.78■■□□□ 1.72
CBFB-204ENST00000563939 DDX10Q13206 875 aaKnown RBP25.78■■□□□ 1.72
CBFB-204ENST00000563939 AKAP4Q5JQC9 854 aa25.78■■□□□ 1.72
CBFB-204ENST00000563939 NUDCQ9Y266 331 aa25.78■■□□□ 1.72
CBFB-204ENST00000563939 PAPPAQ13219 1627 aa25.77■■□□□ 1.72
CBFB-204ENST00000563939 LY75O60449 1722 aa25.77■■□□□ 1.72
CBFB-204ENST00000563939 MTHFSDQ2M296 383 aaKnown RBP25.76■■□□□ 1.71
CBFB-204ENST00000563939 NFATC2IPQ8NCF5 419 aa25.76■■□□□ 1.71
CBFB-204ENST00000563939 PNPLA7Q6ZV29 1317 aa25.76■■□□□ 1.71
CBFB-204ENST00000563939 ITGB4P16144 1822 aa25.76■■□□□ 1.71
CBFB-204ENST00000563939 ATP6V1AP38606 617 aa25.75■■□□□ 1.71
CBFB-204ENST00000563939 RBM42Q9BTD8 480 aaKnown RBP25.75■■□□□ 1.71
CBFB-204ENST00000563939 KDM6AO15550 1401 aaPredicted RBP25.74■■□□□ 1.71
CBFB-204ENST00000563939 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
CBFB-204ENST00000563939 PTGER2P43116 358 aa25.74■■□□□ 1.71
CBFB-204ENST00000563939 SLC16A10Q8TF71 515 aa25.74■■□□□ 1.71
CBFB-204ENST00000563939 CASZ1Q86V15 1759 aa25.74■■□□□ 1.71
CBFB-204ENST00000563939 COL3A1P02461 1466 aaPredicted RBP25.73■■□□□ 1.71
CBFB-204ENST00000563939 AK7Q96M32 723 aa25.73■■□□□ 1.71
CBFB-204ENST00000563939 LGR6Q9HBX8 967 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms