RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 IBTKQ9P2D0 1353 aaPredicted RBP15.48■□□□□ 0.07
CCDC187-201ENST00000563590 CFAP74Q9C0B2 1584 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 NME9Q86XW9 330 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 LMBRD1Q9NUN5 540 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 RABEP1Q15276 862 aa15.47■□□□□ 0.07
CCDC187-201ENST00000563590 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC187-201ENST00000563590 QRICH2Q9H0J4 1663 aa15.47■□□□□ 0.07
CCDC187-201ENST00000563590 NSD2O96028 1365 aa15.47■□□□□ 0.07
CCDC187-201ENST00000563590 GSPT1P15170 499 aaKnown RBP15.47■□□□□ 0.07
CCDC187-201ENST00000563590 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
CCDC187-201ENST00000563590 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC187-201ENST00000563590 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
CCDC187-201ENST00000563590 CCDC94Q9BW85 323 aaPredicted RBP15.47■□□□□ 0.07
CCDC187-201ENST00000563590 AK9Q5TCS8 1911 aa15.47■□□□□ 0.07
CCDC187-201ENST00000563590 TMEM63CQ9P1W3 806 aa15.47■□□□□ 0.07
CCDC187-201ENST00000563590 VWDEQ8N2E2 1590 aa15.46■□□□□ 0.07
CCDC187-201ENST00000563590 A0A0G2JS52 829 aa15.46■□□□□ 0.07
CCDC187-201ENST00000563590 KIF1BO60333 1816 aa15.46■□□□□ 0.07
CCDC187-201ENST00000563590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.07
CCDC187-201ENST00000563590 ZNF592Q92610 1267 aa15.46■□□□□ 0.07
CCDC187-201ENST00000563590 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
CCDC187-201ENST00000563590 KIDINS220Q9ULH0 1771 aa15.46■□□□□ 0.07
CCDC187-201ENST00000563590 SMARCA5O60264 1052 aaPredicted RBP15.46■□□□□ 0.06
CCDC187-201ENST00000563590 DTNBO60941 627 aa15.46■□□□□ 0.06
CCDC187-201ENST00000563590 NSFL1CQ9UNZ2 370 aaKnown RBP15.46■□□□□ 0.06
CCDC187-201ENST00000563590 VGLL3A8MV65 326 aa15.45■□□□□ 0.06
CCDC187-201ENST00000563590 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
CCDC187-201ENST00000563590 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
CCDC187-201ENST00000563590 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.45■□□□□ 0.06
CCDC187-201ENST00000563590 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
CCDC187-201ENST00000563590 A0A1W2PP64 1363 aa15.45■□□□□ 0.06
CCDC187-201ENST00000563590 GPT2Q8TD30 523 aa15.44■□□□□ 0.06
CCDC187-201ENST00000563590 LRSAM1Q6UWE0 723 aa15.44■□□□□ 0.06
CCDC187-201ENST00000563590 CCDC9Q9Y3X0 531 aaKnown RBP15.44■□□□□ 0.06
CCDC187-201ENST00000563590 USP32Q8NFA0 1604 aa15.44■□□□□ 0.06
CCDC187-201ENST00000563590 TRIM6-TRIM34B2RNG4 842 aa15.44■□□□□ 0.06
CCDC187-201ENST00000563590 MCM10Q7L590 875 aa15.43■□□□□ 0.06
CCDC187-201ENST00000563590 MRPL50Q8N5N7 158 aaKnown RBP15.43■□□□□ 0.06
CCDC187-201ENST00000563590 NGDNQ8NEJ9 315 aaKnown RBP15.43■□□□□ 0.06
CCDC187-201ENST00000563590 RILPL2Q969X0 211 aa15.43■□□□□ 0.06
CCDC187-201ENST00000563590 ATAD2Q6PL18 1390 aa15.43■□□□□ 0.06
CCDC187-201ENST00000563590 SETBP1Q9Y6X0 1596 aa15.43■□□□□ 0.06
CCDC187-201ENST00000563590 ZNF500O60304 480 aaPredicted RBP15.43■□□□□ 0.06
CCDC187-201ENST00000563590 INTS3Q68E01 1043 aaKnown RBP15.43■□□□□ 0.06
CCDC187-201ENST00000563590 PDLIM2Q96JY6 352 aa15.43■□□□□ 0.06
CCDC187-201ENST00000563590 ADGRB1O14514 1584 aa15.43■□□□□ 0.06
CCDC187-201ENST00000563590 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
CCDC187-201ENST00000563590 PLEKHM2Q8IWE5 1019 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
CCDC187-201ENST00000563590 IFT172Q9UG01 1749 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 FYB1O15117 783 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 VAMP4O75379 141 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 HS1BP3Q53T59 392 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 MED14O60244 1454 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 TULP4Q9NRJ4 1543 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 TERF1P54274 439 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 TSHZ3Q63HK5 1081 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 SULT6B1Q6IMI4 303 aa15.42■□□□□ 0.06
CCDC187-201ENST00000563590 THEMISQ8N1K5 641 aaPredicted RBP15.42■□□□□ 0.06
CCDC187-201ENST00000563590 LARP6Q9BRS8 491 aaKnown RBP15.42■□□□□ 0.06
CCDC187-201ENST00000563590 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
CCDC187-201ENST00000563590 PDE4CQ08493 712 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC187-201ENST00000563590 ANO2Q9NQ90 1003 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
CCDC187-201ENST00000563590 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC187-201ENST00000563590 COG3Q96JB2 828 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 TRERF1Q96PN7 1200 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
CCDC187-201ENST00000563590 CHMP4BQ9H444 224 aaKnown RBP15.41■□□□□ 0.06
CCDC187-201ENST00000563590 TNRQ92752 1358 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 EFCAB6Q5THR3 1501 aa15.41■□□□□ 0.06
CCDC187-201ENST00000563590 NPHP1O15259 732 aa15.4■□□□□ 0.06
CCDC187-201ENST00000563590 HMGN5P82970 282 aaKnown RBP15.4■□□□□ 0.06
CCDC187-201ENST00000563590 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
CCDC187-201ENST00000563590 MROH1Q8NDA8 1641 aa15.4■□□□□ 0.06
CCDC187-201ENST00000563590 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
CCDC187-201ENST00000563590 FIBPO43427 364 aa15.4■□□□□ 0.06
CCDC187-201ENST00000563590 MBD3O95983 291 aa15.4■□□□□ 0.06
CCDC187-201ENST00000563590 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
CCDC187-201ENST00000563590 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
CCDC187-201ENST00000563590 ADGRB3O60242 1522 aa15.4■□□□□ 0.06
CCDC187-201ENST00000563590 ABCC3O15438 1527 aa15.39■□□□□ 0.05
CCDC187-201ENST00000563590 ADCY5O95622 1261 aa15.39■□□□□ 0.05
CCDC187-201ENST00000563590 AMPHP49418 695 aa15.39■□□□□ 0.05
CCDC187-201ENST00000563590 TTC22Q5TAA0 569 aa15.39■□□□□ 0.05
CCDC187-201ENST00000563590 ZDHHC9Q9Y397 364 aa15.39■□□□□ 0.05
CCDC187-201ENST00000563590 PHF14O94880 888 aa15.39■□□□□ 0.05
CCDC187-201ENST00000563590 ERICH4A6NGS2 130 aa15.38■□□□□ 0.05
CCDC187-201ENST00000563590 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
CCDC187-201ENST00000563590 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
CCDC187-201ENST00000563590 FGD1P98174 961 aa15.38■□□□□ 0.05
CCDC187-201ENST00000563590 F6X3S4 739 aa15.38■□□□□ 0.05
CCDC187-201ENST00000563590 REC8O95072 547 aa15.38■□□□□ 0.05
CCDC187-201ENST00000563590 BRPF1P55201 1214 aaPredicted RBP15.38■□□□□ 0.05
CCDC187-201ENST00000563590 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms