RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
CDH11-208ENST00000563492 NHSQ6T4R5 1651 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 PNPLA7Q6ZV29 1317 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 RGPD3A6NKT7 1758 aaPredicted RBP9.61□□□□□ -0.87
CDH11-208ENST00000563492 RGPD4Q7Z3J3 1758 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 CYP27B1O15528 508 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 TNNT2P45379 298 aaPredicted RBP9.61□□□□□ -0.87
CDH11-208ENST00000563492 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 SMIM5Q71RC9 77 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 RAPGEF4Q8WZA2 1011 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 ARXQ96QS3 562 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 INSRP06213 1382 aa9.61□□□□□ -0.87
CDH11-208ENST00000563492 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
CDH11-208ENST00000563492 SLC27A3Q5K4L6 730 aa9.6□□□□□ -0.87
CDH11-208ENST00000563492 TFCP2L1Q9NZI6 479 aa9.6□□□□□ -0.87
CDH11-208ENST00000563492 CCNL1Q9UK58 526 aaPredicted RBP9.6□□□□□ -0.87
CDH11-208ENST00000563492 FAM208AQ9UK61 1670 aaKnown RBP9.6□□□□□ -0.87
CDH11-208ENST00000563492 RTL1A6NKG5 1358 aa9.6□□□□□ -0.87
CDH11-208ENST00000563492 BTAF1O14981 1849 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 MYOM1P52179 1685 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 HSPA5P11021 654 aaKnown RBP9.59□□□□□ -0.87
CDH11-208ENST00000563492 MPRIPQ6WCQ1 1025 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 EYA1Q99502 592 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 POLKQ9UBT6 870 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 TIMELESSQ9UNS1 1208 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 RGPD2P0DJD1 1756 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 FLT4P35916 1363 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 PAPPAQ13219 1627 aa9.59□□□□□ -0.87
CDH11-208ENST00000563492 AMIGO3Q86WK7 504 aa9.58□□□□□ -0.88
CDH11-208ENST00000563492 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
CDH11-208ENST00000563492 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
CDH11-208ENST00000563492 KAT6BQ8WYB5 2073 aa9.58□□□□□ -0.88
CDH11-208ENST00000563492 DCAF8L1A6NGE4 600 aa9.57□□□□□ -0.88
CDH11-208ENST00000563492 MSH5O43196 834 aa9.57□□□□□ -0.88
CDH11-208ENST00000563492 MSL1Q68DK7 614 aa9.57□□□□□ -0.88
CDH11-208ENST00000563492 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
CDH11-208ENST00000563492 PIGBQ92521 554 aa9.57□□□□□ -0.88
CDH11-208ENST00000563492 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
CDH11-208ENST00000563492 WASHC2AQ641Q2 1341 aa9.56□□□□□ -0.88
CDH11-208ENST00000563492 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
CDH11-208ENST00000563492 UTRNP46939 3433 aa9.56□□□□□ -0.88
CDH11-208ENST00000563492 EIF4A2Q14240 407 aaKnown RBP9.56□□□□□ -0.88
CDH11-208ENST00000563492 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
CDH11-208ENST00000563492 PANK3Q9H999 370 aa9.56□□□□□ -0.88
CDH11-208ENST00000563492 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
CDH11-208ENST00000563492 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
CDH11-208ENST00000563492 EIF4G2P78344 907 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH11-208ENST00000563492 SLC16A10Q8TF71 515 aa9.55□□□□□ -0.88
CDH11-208ENST00000563492 SHANK3Q9BYB0 1731 aa9.55□□□□□ -0.88
CDH11-208ENST00000563492 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
CDH11-208ENST00000563492 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
CDH11-208ENST00000563492 PALLDQ8WX93 1383 aa9.54□□□□□ -0.88
CDH11-208ENST00000563492 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
CDH11-208ENST00000563492 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
CDH11-208ENST00000563492 ZNF784Q8NCA9 323 aaPredicted RBP9.54□□□□□ -0.88
CDH11-208ENST00000563492 ASAP1Q9ULH1 1129 aa9.54□□□□□ -0.88
CDH11-208ENST00000563492 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
CDH11-208ENST00000563492 POLD1P28340 1107 aa9.53□□□□□ -0.88
CDH11-208ENST00000563492 GPR162Q16538 588 aa9.53□□□□□ -0.88
CDH11-208ENST00000563492 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
CDH11-208ENST00000563492 MAP3K5Q99683 1374 aa9.52□□□□□ -0.88
CDH11-208ENST00000563492 PHF14O94880 888 aa9.52□□□□□ -0.89
CDH11-208ENST00000563492 PHKG2P15735 406 aa9.52□□□□□ -0.89
CDH11-208ENST00000563492 ITPK1Q13572 414 aa9.52□□□□□ -0.89
CDH11-208ENST00000563492 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
CDH11-208ENST00000563492 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
CDH11-208ENST00000563492 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDH11-208ENST00000563492 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
CDH11-208ENST00000563492 ATG3Q9NT62 314 aa9.51□□□□□ -0.89
CDH11-208ENST00000563492 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
CDH11-208ENST00000563492 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.5□□□□□ -0.89
CDH11-208ENST00000563492 LOC102724428A0A0B4J2F2 783 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 SIK1P57059 783 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 MORC1Q86VD1 984 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 IFNL2Q8IZJ0 200 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 SMARCC1Q92922 1105 aaPredicted RBP9.5□□□□□ -0.89
CDH11-208ENST00000563492 SLC4A9Q96Q91 983 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDH11-208ENST00000563492 TMOD3Q9NYL9 352 aa9.5□□□□□ -0.89
CDH11-208ENST00000563492 LY75O60449 1722 aa9.49□□□□□ -0.89
CDH11-208ENST00000563492 AK7Q96M32 723 aa9.49□□□□□ -0.89
CDH11-208ENST00000563492 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
CDH11-208ENST00000563492 GOLGB1Q14789 3259 aaKnown RBP9.48□□□□□ -0.89
CDH11-208ENST00000563492 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
CDH11-208ENST00000563492 TUBGCP6Q96RT7 1819 aa9.48□□□□□ -0.89
CDH11-208ENST00000563492 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
CDH11-208ENST00000563492 GNPATO15228 680 aa9.47□□□□□ -0.89
CDH11-208ENST00000563492 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
CDH11-208ENST00000563492 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
CDH11-208ENST00000563492 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
CDH11-208ENST00000563492 FLAD1Q8NFF5 587 aa9.47□□□□□ -0.89
CDH11-208ENST00000563492 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
CDH11-208ENST00000563492 IL13P35225 146 aa9.46□□□□□ -0.9
CDH11-208ENST00000563492 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.9
CDH11-208ENST00000563492 SULT6B1Q6IMI4 303 aa9.46□□□□□ -0.9
CDH11-208ENST00000563492 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.9
CDH11-208ENST00000563492 KIF7Q2M1P5 1343 aa9.46□□□□□ -0.9
CDH11-208ENST00000563492 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
CDH11-208ENST00000563492 PTCD1O75127 700 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms