RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 MSL1Q68DK7 614 aa13.21□□□□□ -0.29
RPAP1-205ENST00000563293 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
RPAP1-205ENST00000563293 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
RPAP1-205ENST00000563293 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
RPAP1-205ENST00000563293 LY75O60449 1722 aa13.2□□□□□ -0.3
RPAP1-205ENST00000563293 FBLN1P23142 703 aa13.2□□□□□ -0.3
RPAP1-205ENST00000563293 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
RPAP1-205ENST00000563293 USP54Q70EL1 1684 aa13.19□□□□□ -0.3
RPAP1-205ENST00000563293 RGPD2P0DJD1 1756 aa13.18□□□□□ -0.3
RPAP1-205ENST00000563293 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
RPAP1-205ENST00000563293 DOT1LQ8TEK3 1739 aa13.18□□□□□ -0.3
RPAP1-205ENST00000563293 MSH5O43196 834 aa13.17□□□□□ -0.3
RPAP1-205ENST00000563293 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
RPAP1-205ENST00000563293 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
RPAP1-205ENST00000563293 IP6K1Q92551 441 aa13.17□□□□□ -0.3
RPAP1-205ENST00000563293 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
RPAP1-205ENST00000563293 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
RPAP1-205ENST00000563293 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
RPAP1-205ENST00000563293 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
RPAP1-205ENST00000563293 WWC3Q9ULE0 1092 aa13.16□□□□□ -0.3
RPAP1-205ENST00000563293 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
RPAP1-205ENST00000563293 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPAP1-205ENST00000563293 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
RPAP1-205ENST00000563293 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
RPAP1-205ENST00000563293 CARD11Q9BXL7 1154 aa13.15□□□□□ -0.3
RPAP1-205ENST00000563293 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.31
RPAP1-205ENST00000563293 HSPA6P17066 643 aa13.14□□□□□ -0.31
RPAP1-205ENST00000563293 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
RPAP1-205ENST00000563293 ADCY9O60503 1353 aa13.14□□□□□ -0.31
RPAP1-205ENST00000563293 MEGF6O75095 1541 aa13.13□□□□□ -0.31
RPAP1-205ENST00000563293 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
RPAP1-205ENST00000563293 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
RPAP1-205ENST00000563293 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
RPAP1-205ENST00000563293 HOXC9P31274 260 aa13.11□□□□□ -0.31
RPAP1-205ENST00000563293 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
RPAP1-205ENST00000563293 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
RPAP1-205ENST00000563293 C5P01031 1676 aa13.1□□□□□ -0.31
RPAP1-205ENST00000563293 NBPF6Q5VWK0 638 aa13.1□□□□□ -0.31
RPAP1-205ENST00000563293 HDGFL2Q7Z4V5 671 aaPredicted RBP13.1□□□□□ -0.31
RPAP1-205ENST00000563293 NBPF4Q96M43 638 aa13.1□□□□□ -0.31
RPAP1-205ENST00000563293 PCNTO95613 3336 aa13.1□□□□□ -0.31
RPAP1-205ENST00000563293 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
RPAP1-205ENST00000563293 USP47Q96K76 1375 aa13.09□□□□□ -0.31
RPAP1-205ENST00000563293 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
RPAP1-205ENST00000563293 KIF3CO14782 793 aa13.09□□□□□ -0.31
RPAP1-205ENST00000563293 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
RPAP1-205ENST00000563293 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
RPAP1-205ENST00000563293 AMPHP49418 695 aa13.07□□□□□ -0.32
RPAP1-205ENST00000563293 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
RPAP1-205ENST00000563293 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
RPAP1-205ENST00000563293 HSPA5P11021 654 aaKnown RBP13.06□□□□□ -0.32
RPAP1-205ENST00000563293 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
RPAP1-205ENST00000563293 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
RPAP1-205ENST00000563293 PHF14O94880 888 aa13.05□□□□□ -0.32
RPAP1-205ENST00000563293 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
RPAP1-205ENST00000563293 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
RPAP1-205ENST00000563293 COG3Q96JB2 828 aa13.04□□□□□ -0.32
RPAP1-205ENST00000563293 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
RPAP1-205ENST00000563293 ITGB4P16144 1822 aa13.04□□□□□ -0.32
RPAP1-205ENST00000563293 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
RPAP1-205ENST00000563293 ST20-MTHFSA0A0A6YYL1 179 aa13.03□□□□□ -0.32
RPAP1-205ENST00000563293 CYP27B1O15528 508 aa13.03□□□□□ -0.32
RPAP1-205ENST00000563293 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
RPAP1-205ENST00000563293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
RPAP1-205ENST00000563293 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
RPAP1-205ENST00000563293 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
RPAP1-205ENST00000563293 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
RPAP1-205ENST00000563293 PIGBQ92521 554 aa13.01□□□□□ -0.33
RPAP1-205ENST00000563293 AK7Q96M32 723 aa13.01□□□□□ -0.33
RPAP1-205ENST00000563293 TESK2Q96S53 571 aa13.01□□□□□ -0.33
RPAP1-205ENST00000563293 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
RPAP1-205ENST00000563293 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
RPAP1-205ENST00000563293 FYB1O15117 783 aa13□□□□□ -0.33
RPAP1-205ENST00000563293 TATP17735 454 aaPredicted RBP13□□□□□ -0.33
RPAP1-205ENST00000563293 TMF1P82094 1093 aa13□□□□□ -0.33
RPAP1-205ENST00000563293 HTRA3P83110 453 aa13□□□□□ -0.33
RPAP1-205ENST00000563293 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
RPAP1-205ENST00000563293 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
RPAP1-205ENST00000563293 CGNL1Q0VF96 1302 aa12.99□□□□□ -0.33
RPAP1-205ENST00000563293 APLP1P51693 650 aa12.99□□□□□ -0.33
RPAP1-205ENST00000563293 ITPK1Q13572 414 aa12.99□□□□□ -0.33
RPAP1-205ENST00000563293 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
RPAP1-205ENST00000563293 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
RPAP1-205ENST00000563293 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
RPAP1-205ENST00000563293 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
RPAP1-205ENST00000563293 NMRK2Q9NPI5 230 aa12.98□□□□□ -0.33
RPAP1-205ENST00000563293 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
RPAP1-205ENST00000563293 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
RPAP1-205ENST00000563293 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
RPAP1-205ENST00000563293 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
RPAP1-205ENST00000563293 CICQ96RK0 1608 aaPredicted RBP12.97□□□□□ -0.33
RPAP1-205ENST00000563293 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
RPAP1-205ENST00000563293 LOC102724428A0A0B4J2F2 783 aa12.96□□□□□ -0.33
RPAP1-205ENST00000563293 TOMM70O94826 608 aa12.96□□□□□ -0.33
RPAP1-205ENST00000563293 MMP10P09238 476 aa12.96□□□□□ -0.33
RPAP1-205ENST00000563293 SIK1P57059 783 aa12.96□□□□□ -0.33
RPAP1-205ENST00000563293 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
RPAP1-205ENST00000563293 INSRP06213 1382 aa12.95□□□□□ -0.34
RPAP1-205ENST00000563293 KIF13BQ9NQT8 1826 aa12.95□□□□□ -0.34
RPAP1-205ENST00000563293 SSFA2P28290 1259 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms