RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CYP2C19P33261 490 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 MCTP2Q6DN12 878 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 ANKRD7Q92527 254 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 CWC25Q9NXE8 425 aaPredicted RBP11.22□□□□□ -0.61
CDH1-205ENST00000562836 SH3BP5O60239 455 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 KCNV1Q6PIU1 500 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 ELOA2Q8IYF1 753 aaPredicted RBP11.22□□□□□ -0.61
CDH1-205ENST00000562836 RPUSD2Q8IZ73 545 aaKnown RBP11.22□□□□□ -0.61
CDH1-205ENST00000562836 CCDC26Q8TAB7 109 aa11.22□□□□□ -0.61
CDH1-205ENST00000562836 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
CDH1-205ENST00000562836 G3BP2Q9UN86 482 aaKnown RBP11.22□□□□□ -0.61
CDH1-205ENST00000562836 TMCO5BA8MYB1 307 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 U2SURPO15042 1029 aaKnown RBP11.21□□□□□ -0.61
CDH1-205ENST00000562836 SLC7A5Q01650 507 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 NYAP1Q6ZVC0 841 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 DUSP9Q99956 384 aaKnown RBP11.21□□□□□ -0.61
CDH1-205ENST00000562836 TMEM165Q9HC07 324 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 PEG3Q9GZU2 1588 aa11.21□□□□□ -0.61
CDH1-205ENST00000562836 AP1G2O75843 785 aa11.21□□□□□ -0.62
CDH1-205ENST00000562836 ZRANB2O95218 330 aaKnown RBP eCLIP11.21□□□□□ -0.62
CDH1-205ENST00000562836 HSP90AB1P08238 724 aaKnown RBP11.21□□□□□ -0.62
CDH1-205ENST00000562836 FAM200BP0CF97 657 aa11.21□□□□□ -0.62
CDH1-205ENST00000562836 WDR78Q5VTH9 848 aa11.21□□□□□ -0.62
CDH1-205ENST00000562836 MORC2Q9Y6X9 1032 aaPredicted RBP11.21□□□□□ -0.62
CDH1-205ENST00000562836 FLT3P36888 993 aa11.2□□□□□ -0.62
CDH1-205ENST00000562836 CCDC70Q6NSX1 233 aa11.2□□□□□ -0.62
CDH1-205ENST00000562836 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
CDH1-205ENST00000562836 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
CDH1-205ENST00000562836 CTNNA3Q9UI47 895 aa11.2□□□□□ -0.62
CDH1-205ENST00000562836 CCDC34Q96HJ3 373 aa11.2□□□□□ -0.62
CDH1-205ENST00000562836 RAB11FIP3O75154 756 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 HSCBQ8IWL3 235 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 CWC15Q9P013 229 aaKnown RBP11.19□□□□□ -0.62
CDH1-205ENST00000562836 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 XBP1P17861 261 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 KRT222Q8N1A0 295 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 CACTIN-AS1Q8N1I8 211 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 TDRD7Q8NHU6 1098 aaKnown RBP11.19□□□□□ -0.62
CDH1-205ENST00000562836 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
CDH1-205ENST00000562836 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
CDH1-205ENST00000562836 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 REC8O95072 547 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 MCM5P33992 734 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 HHATQ5VTY9 493 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 ANTXR1Q9H6X2 564 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 TBC1D8BQ0IIM8 1120 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 CDC37Q16543 378 aaPredicted RBP11.18□□□□□ -0.62
CDH1-205ENST00000562836 NCAPG2Q86XI2 1143 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 TMOD4Q9NZQ9 345 aa11.18□□□□□ -0.62
CDH1-205ENST00000562836 CCDC178Q5BJE1 867 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 IQCF2Q8IXL9 164 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
CDH1-205ENST00000562836 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 SYNRGQ9UMZ2 1314 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 CUX2O14529 1486 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 SHTN1A0MZ66 631 aa11.17□□□□□ -0.62
CDH1-205ENST00000562836 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
CDH1-205ENST00000562836 CREB3O43889 395 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 RWDD2BP57060 319 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 SUGP1Q8IWZ8 645 aaKnown RBP11.16□□□□□ -0.62
CDH1-205ENST00000562836 MIEF2Q96C03 454 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 RABL2AQ9UBK7 228 aaPredicted RBP11.16□□□□□ -0.62
CDH1-205ENST00000562836 EXOC5O00471 708 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 CA8P35219 290 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 NEK9Q8TD19 979 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
CDH1-205ENST00000562836 CDKL5O76039 1030 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 C17orf50Q8WW18 174 aa11.16□□□□□ -0.62
CDH1-205ENST00000562836 PYGLP06737 847 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 ALDH1B1P30837 517 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 SNX1Q13596 522 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 MUM1L1Q5H9M0 696 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 TTLL5Q6EMB2 1281 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 TRIML1Q8N9V2 468 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 BICD1Q96G01 975 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 MRFAP1L1Q96HT8 127 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 SH3GL3Q99963 347 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 ITM2BQ9Y287 266 aa11.15□□□□□ -0.62
CDH1-205ENST00000562836 ANKRD62A6NC57 917 aa11.15□□□□□ -0.63
CDH1-205ENST00000562836 MYSM1Q5VVJ2 828 aa11.15□□□□□ -0.63
CDH1-205ENST00000562836 CCDC191Q8NCU4 936 aa11.15□□□□□ -0.63
CDH1-205ENST00000562836 SPATA32Q96LK8 384 aa11.15□□□□□ -0.63
CDH1-205ENST00000562836 CEP89Q96ST8 783 aa11.15□□□□□ -0.63
CDH1-205ENST00000562836 MMTAG2Q9BU76 263 aaKnown RBP11.15□□□□□ -0.63
CDH1-205ENST00000562836 IQCGQ9H095 443 aaKnown RBP11.15□□□□□ -0.63
CDH1-205ENST00000562836 ST7Q9NRC1 585 aa11.15□□□□□ -0.63
CDH1-205ENST00000562836 LMCD1Q9NZU5 365 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms