RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 DHX8Q14562 1220 aaKnown RBP13.24□□□□□ -0.29
RPAP1-204ENST00000562303 CEP57L1Q8IYX8 460 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
RPAP1-204ENST00000562303 BCAR3O75815 825 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 WASF1Q92558 559 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
RPAP1-204ENST00000562303 PPM1FP49593 454 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 RRS1Q15050 365 aaKnown RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.292e-8■■■■□ 25.1
RPAP1-204ENST00000562303 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
RPAP1-204ENST00000562303 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 CENPHQ9H3R5 247 aa13.23□□□□□ -0.29
RPAP1-204ENST00000562303 TTLL12Q14166 644 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
RPAP1-204ENST00000562303 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
RPAP1-204ENST00000562303 LEKR1Q6ZMV7 388 aa13.23□□□□□ -0.29
RPAP1-204ENST00000562303 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-204ENST00000562303 DNAI2Q9GZS0 605 aa13.23□□□□□ -0.29
RPAP1-204ENST00000562303 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
RPAP1-204ENST00000562303 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
RPAP1-204ENST00000562303 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
RPAP1-204ENST00000562303 IMMTQ16891 758 aaKnown RBP13.22□□□□□ -0.29
RPAP1-204ENST00000562303 PPP4R3AQ6IN85 833 aa13.22□□□□□ -0.29
RPAP1-204ENST00000562303 SPATA32Q96LK8 384 aa13.22□□□□□ -0.29
RPAP1-204ENST00000562303 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
RPAP1-204ENST00000562303 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
RPAP1-204ENST00000562303 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
RPAP1-204ENST00000562303 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
RPAP1-204ENST00000562303 KRT32Q14532 448 aa13.21□□□□□ -0.29
RPAP1-204ENST00000562303 WDR78Q5VTH9 848 aa13.21□□□□□ -0.29
RPAP1-204ENST00000562303 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
RPAP1-204ENST00000562303 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
RPAP1-204ENST00000562303 IGF1RP08069 1367 aa13.21□□□□□ -0.3
RPAP1-204ENST00000562303 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.3
RPAP1-204ENST00000562303 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.3
RPAP1-204ENST00000562303 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
RPAP1-204ENST00000562303 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
RPAP1-204ENST00000562303 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
RPAP1-204ENST00000562303 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 TAF4BQ92750 862 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 POGZQ7Z3K3 1410 aa13.2□□□□□ -0.3
RPAP1-204ENST00000562303 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 CEP131Q9UPN4 1083 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 GNAT3A8MTJ3 354 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 GOLGA6L7A0A1B0GV03 622 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 LRRFIP2Q9Y608 721 aaKnown RBP13.19□□□□□ -0.3
RPAP1-204ENST00000562303 K7ELQ4 463 aaPredicted RBP13.19□□□□□ -0.3
RPAP1-204ENST00000562303 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
RPAP1-204ENST00000562303 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
RPAP1-204ENST00000562303 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 ERLIN1O75477 346 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 FAM193AP78312 1265 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
RPAP1-204ENST00000562303 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 PRG4Q92954 1404 aaPredicted RBP13.18□□□□□ -0.3
RPAP1-204ENST00000562303 CETN2P41208 172 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 KIAA0754O94854 1291 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
RPAP1-204ENST00000562303 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 MTERF4Q7Z6M4 381 aaKnown RBP13.18□□□□□ -0.3
RPAP1-204ENST00000562303 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
RPAP1-204ENST00000562303 NCOA2Q15596 1464 aa13.17□□□□□ -0.3
RPAP1-204ENST00000562303 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
RPAP1-204ENST00000562303 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
RPAP1-204ENST00000562303 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
RPAP1-204ENST00000562303 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
RPAP1-204ENST00000562303 MPNDQ8N594 471 aa13.17□□□□□ -0.3
RPAP1-204ENST00000562303 MVPQ14764 893 aaKnown RBP13.17□□□□□ -0.3
RPAP1-204ENST00000562303 ANAPC15P60006 121 aa13.16□□□□□ -0.3
RPAP1-204ENST00000562303 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
RPAP1-204ENST00000562303 ZNF397Q8NF99 534 aaPredicted RBP13.16□□□□□ -0.3
RPAP1-204ENST00000562303 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
RPAP1-204ENST00000562303 SMTNL1A8MU46 457 aa13.16□□□□□ -0.3
RPAP1-204ENST00000562303 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
RPAP1-204ENST00000562303 CUL5Q93034 780 aa13.16□□□□□ -0.3
RPAP1-204ENST00000562303 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
RPAP1-204ENST00000562303 HFM1A2PYH4 1435 aa13.16□□□□□ -0.3
RPAP1-204ENST00000562303 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
RPAP1-204ENST00000562303 RAPGEF3O95398 923 aa13.15□□□□□ -0.3
RPAP1-204ENST00000562303 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
RPAP1-204ENST00000562303 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
RPAP1-204ENST00000562303 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
RPAP1-204ENST00000562303 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
RPAP1-204ENST00000562303 MYD88Q99836 296 aa13.15□□□□□ -0.3
RPAP1-204ENST00000562303 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
RPAP1-204ENST00000562303 TSG101Q99816 390 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms