RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
DENND4A-204ENST00000562028 RASA1P20936 1047 aa10.64□□□□□ -0.71
DENND4A-204ENST00000562028 GTF2IP78347 998 aa10.64□□□□□ -0.71
DENND4A-204ENST00000562028 LARP1Q6PKG0 1096 aaKnown RBP10.64□□□□□ -0.71
DENND4A-204ENST00000562028 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
DENND4A-204ENST00000562028 HPS1Q92902 700 aa10.64□□□□□ -0.71
DENND4A-204ENST00000562028 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
DENND4A-204ENST00000562028 PCDHGA11Q9Y5H2 935 aa10.64□□□□□ -0.71
DENND4A-204ENST00000562028 ZIC2O95409 532 aaPredicted RBP10.63□□□□□ -0.71
DENND4A-204ENST00000562028 TIMP2P16035 220 aa10.63□□□□□ -0.71
DENND4A-204ENST00000562028 ELOAQ14241 798 aaKnown RBP10.63□□□□□ -0.71
DENND4A-204ENST00000562028 LARGE2Q8N3Y3 721 aa10.63□□□□□ -0.71
DENND4A-204ENST00000562028 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
DENND4A-204ENST00000562028 DNAAF2Q9NVR5 837 aaKnown RBP10.63□□□□□ -0.71
DENND4A-204ENST00000562028 NRG2O14511 850 aaPredicted RBP10.62□□□□□ -0.71
DENND4A-204ENST00000562028 GFRA3O60609 400 aa10.62□□□□□ -0.71
DENND4A-204ENST00000562028 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
DENND4A-204ENST00000562028 CLDN10P78369 228 aa10.62□□□□□ -0.71
DENND4A-204ENST00000562028 PTK7Q13308 1070 aa10.62□□□□□ -0.71
DENND4A-204ENST00000562028 FAM187AA6NFU0 413 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L15C9J2P7 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L10C9JJH3 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L13C9JLJ4 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L12C9JPN9 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L11C9JVI0 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L21D6R901 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L18D6R9N7 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L22D6RA61 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L17D6RBQ6 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L19D6RCP7 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L20D6RJB6 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
DENND4A-204ENST00000562028 USP17L24Q0WX57 530 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 LAPTM4AQ15012 233 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 CRTC2Q53ET0 693 aaPredicted RBP10.61□□□□□ -0.71
DENND4A-204ENST00000562028 Q6ZVU0 165 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
DENND4A-204ENST00000562028 DGAT1O75907 488 aa10.6□□□□□ -0.71
DENND4A-204ENST00000562028 AVPP01185 164 aa10.6□□□□□ -0.71
DENND4A-204ENST00000562028 ADH1AP07327 375 aa10.59□□□□□ -0.71
DENND4A-204ENST00000562028 HOMEZQ8IX15 550 aa10.59□□□□□ -0.71
DENND4A-204ENST00000562028 SIX5Q8N196 739 aa10.59□□□□□ -0.71
DENND4A-204ENST00000562028 GNRH1P01148 92 aa10.58□□□□□ -0.72
DENND4A-204ENST00000562028 CBLBQ13191 982 aa10.58□□□□□ -0.72
DENND4A-204ENST00000562028 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
DENND4A-204ENST00000562028 ZNF594Q96JF6 807 aaPredicted RBP10.58□□□□□ -0.72
DENND4A-204ENST00000562028 NOVA2Q9UNW9 492 aaKnown RBP10.58□□□□□ -0.72
DENND4A-204ENST00000562028 KIAA1024Q9UPX6 916 aa10.58□□□□□ -0.72
DENND4A-204ENST00000562028 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
DENND4A-204ENST00000562028 DKK1O94907 266 aa10.57□□□□□ -0.72
DENND4A-204ENST00000562028 PSME1Q06323 249 aa10.57□□□□□ -0.72
DENND4A-204ENST00000562028 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
DENND4A-204ENST00000562028 CCDC102BQ68D86 513 aa10.57□□□□□ -0.72
DENND4A-204ENST00000562028 CSB-PGBD3P0DP91 1061 aa10.56□□□□□ -0.72
DENND4A-204ENST00000562028 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
DENND4A-204ENST00000562028 TPCN2Q8NHX9 752 aa10.56□□□□□ -0.72
DENND4A-204ENST00000562028 ZMIZ1Q9ULJ6 1067 aa10.56□□□□□ -0.72
DENND4A-204ENST00000562028 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
DENND4A-204ENST00000562028 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
DENND4A-204ENST00000562028 PDE4CQ08493 712 aa10.55□□□□□ -0.72
DENND4A-204ENST00000562028 DPYDQ12882 1025 aa10.55□□□□□ -0.72
DENND4A-204ENST00000562028 CTC1Q2NKJ3 1217 aa10.55□□□□□ -0.72
DENND4A-204ENST00000562028 KDF1Q8NAX2 398 aaPredicted RBP10.55□□□□□ -0.72
DENND4A-204ENST00000562028 RETREG2Q8NC44 543 aa10.55□□□□□ -0.72
DENND4A-204ENST00000562028 FAM200AQ8TCP9 573 aa10.55□□□□□ -0.72
DENND4A-204ENST00000562028 PTGIRP43119 386 aa10.54□□□□□ -0.72
DENND4A-204ENST00000562028 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
DENND4A-204ENST00000562028 ESCO1Q5FWF5 840 aa10.54□□□□□ -0.72
DENND4A-204ENST00000562028 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
DENND4A-204ENST00000562028 TMEM229AB2RXF0 380 aa10.53□□□□□ -0.72
DENND4A-204ENST00000562028 SCNN1DP51172 638 aa10.53□□□□□ -0.72
DENND4A-204ENST00000562028 GDF10P55107 478 aa10.53□□□□□ -0.72
DENND4A-204ENST00000562028 SEC13P55735 322 aa10.53□□□□□ -0.72
DENND4A-204ENST00000562028 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
DENND4A-204ENST00000562028 IRX2Q9BZI1 471 aaPredicted RBP10.53□□□□□ -0.72
DENND4A-204ENST00000562028 M0R2N6 131 aa10.52□□□□□ -0.73
DENND4A-204ENST00000562028 INHAP05111 366 aa10.52□□□□□ -0.73
DENND4A-204ENST00000562028 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
DENND4A-204ENST00000562028 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
DENND4A-204ENST00000562028 ETNK1Q9HBU6 452 aa10.52□□□□□ -0.73
DENND4A-204ENST00000562028 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
DENND4A-204ENST00000562028 STK32AQ8WU08 396 aa10.51□□□□□ -0.73
DENND4A-204ENST00000562028 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
DENND4A-204ENST00000562028 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
DENND4A-204ENST00000562028 BACH1O14867 736 aa10.5□□□□□ -0.73
DENND4A-204ENST00000562028 RELBQ01201 579 aa10.5□□□□□ -0.73
DENND4A-204ENST00000562028 CLN3Q13286 438 aa10.5□□□□□ -0.73
DENND4A-204ENST00000562028 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.5□□□□□ -0.73
DENND4A-204ENST00000562028 XAGE2Q96GT9 111 aa10.5□□□□□ -0.73
DENND4A-204ENST00000562028 ZNF358Q9NW07 568 aa10.5□□□□□ -0.73
DENND4A-204ENST00000562028 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
DENND4A-204ENST00000562028 SFI1A8K8P3 1242 aa10.49□□□□□ -0.73
DENND4A-204ENST00000562028 UPP2O95045 317 aa10.49□□□□□ -0.73
DENND4A-204ENST00000562028 STAU1O95793 577 aaKnown RBP10.49□□□□□ -0.73
DENND4A-204ENST00000562028 SLC4A9Q96Q91 983 aa10.49□□□□□ -0.73
DENND4A-204ENST00000562028 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
DENND4A-204ENST00000562028 AXIN1O15169 862 aa10.48□□□□□ -0.73
DENND4A-204ENST00000562028 IL2RAP01589 272 aa10.48□□□□□ -0.73
DENND4A-204ENST00000562028 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms