RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 TRAK2O60296 914 aa25.21■■□□□ 1.63
RPUSD1-202ENST00000561734 ANKRD44Q8N8A2 993 aa25.21■■□□□ 1.63
RPUSD1-202ENST00000561734 MSH6P52701 1360 aa25.21■■□□□ 1.63
RPUSD1-202ENST00000561734 CRB1P82279 1406 aa25.2■■□□□ 1.62
RPUSD1-202ENST00000561734 PTPRUQ92729 1446 aa25.2■■□□□ 1.62
RPUSD1-202ENST00000561734 SSH2Q76I76 1423 aa25.19■■□□□ 1.62
RPUSD1-202ENST00000561734 C16orf71Q8IYS4 520 aaPredicted RBP25.18■■□□□ 1.62
RPUSD1-202ENST00000561734 SLC26A8Q96RN1 970 aa25.18■■□□□ 1.62
RPUSD1-202ENST00000561734 RBM42Q9BTD8 480 aaKnown RBP25.18■■□□□ 1.62
RPUSD1-202ENST00000561734 CEP85Q6P2H3 762 aa25.18■■□□□ 1.62
RPUSD1-202ENST00000561734 ARXQ96QS3 562 aa25.18■■□□□ 1.62
RPUSD1-202ENST00000561734 PTPRCP08575 1304 aa25.18■■□□□ 1.62
RPUSD1-202ENST00000561734 DDX11L8A8MPP1 907 aa25.17■■□□□ 1.62
RPUSD1-202ENST00000561734 TTC22Q5TAA0 569 aa25.17■■□□□ 1.62
RPUSD1-202ENST00000561734 MAP3K19Q56UN5 1328 aa25.17■■□□□ 1.62
RPUSD1-202ENST00000561734 RTL1A6NKG5 1358 aa25.17■■□□□ 1.62
RPUSD1-202ENST00000561734 FSD2A1L4K1 749 aa25.17■■□□□ 1.62
RPUSD1-202ENST00000561734 CIZ1Q9ULV3 898 aaPredicted RBP25.17■■□□□ 1.62
RPUSD1-202ENST00000561734 ARHGEF10O15013 1369 aa25.16■■□□□ 1.62
RPUSD1-202ENST00000561734 GOLGA6L3A6NEY3 463 aa25.16■■□□□ 1.62
RPUSD1-202ENST00000561734 RPAP2Q8IXW5 612 aaPredicted RBP25.16■■□□□ 1.62
RPUSD1-202ENST00000561734 TNPO1Q92973 898 aaKnown RBP25.16■■□□□ 1.62
RPUSD1-202ENST00000561734 MIS18AQ9NYP9 233 aa25.16■■□□□ 1.62
RPUSD1-202ENST00000561734 FOXO3O43524 673 aa25.15■■□□□ 1.62
RPUSD1-202ENST00000561734 MEIS3Q99687 375 aa25.15■■□□□ 1.62
RPUSD1-202ENST00000561734 K7ELQ4 463 aaPredicted RBP25.15■■□□□ 1.62
RPUSD1-202ENST00000561734 RIMS1Q86UR5 1692 aaKnown RBP25.14■■□□□ 1.62
RPUSD1-202ENST00000561734 OTUD7AQ8TE49 926 aaPredicted RBP25.14■■□□□ 1.62
RPUSD1-202ENST00000561734 FOXD4L1Q9NU39 408 aa25.14■■□□□ 1.62
RPUSD1-202ENST00000561734 SLC4A2P04920 1241 aa25.14■■□□□ 1.61
RPUSD1-202ENST00000561734 MTHFSDQ2M296 383 aaKnown RBP25.13■■□□□ 1.61
RPUSD1-202ENST00000561734 FMN2Q9NZ56 1722 aa25.13■■□□□ 1.61
RPUSD1-202ENST00000561734 HSP90AA1P07900 732 aaKnown RBP25.12■■□□□ 1.61
RPUSD1-202ENST00000561734 RAB3GAP1Q15042 981 aa25.12■■□□□ 1.61
RPUSD1-202ENST00000561734 FAM43AQ8N2R8 423 aa25.12■■□□□ 1.61
RPUSD1-202ENST00000561734 XRCC6P12956 609 aaKnown RBP eCLIP25.12■■□□□ 1.61
RPUSD1-202ENST00000561734 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
RPUSD1-202ENST00000561734 SMARCA5O60264 1052 aaPredicted RBP25.11■■□□□ 1.61
RPUSD1-202ENST00000561734 CEBPAP49715 358 aaPredicted RBP25.11■■□□□ 1.61
RPUSD1-202ENST00000561734 AMOTL2Q9Y2J4 779 aa25.11■■□□□ 1.61
RPUSD1-202ENST00000561734 SBNO1A3KN83 1393 aa25.1■■□□□ 1.61
RPUSD1-202ENST00000561734 FLT4P35916 1363 aa25.1■■□□□ 1.61
RPUSD1-202ENST00000561734 APBB1O00213 710 aa25.1■■□□□ 1.61
RPUSD1-202ENST00000561734 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
RPUSD1-202ENST00000561734 RTF1Q92541 710 aaKnown RBP25.1■■□□□ 1.61
RPUSD1-202ENST00000561734 G2E3Q7L622 706 aa25.08■■□□□ 1.61
RPUSD1-202ENST00000561734 GAS2L2Q8NHY3 880 aa25.08■■□□□ 1.61
RPUSD1-202ENST00000561734 KDRP35968 1356 aa25.08■■□□□ 1.61
RPUSD1-202ENST00000561734 CEP170BQ9Y4F5 1589 aaPredicted RBP25.08■■□□□ 1.61
RPUSD1-202ENST00000561734 GBP4Q96PP9 640 aa25.08■■□□□ 1.61
RPUSD1-202ENST00000561734 EID1Q9Y6B2 187 aa25.08■■□□□ 1.61
RPUSD1-202ENST00000561734 ANO8Q9HCE9 1232 aaPredicted RBP25.07■■□□□ 1.6
RPUSD1-202ENST00000561734 F6X3S4 739 aa25.07■■□□□ 1.6
RPUSD1-202ENST00000561734 EIF5BO60841 1220 aaKnown RBP25.07■■□□□ 1.6
RPUSD1-202ENST00000561734 SDSP20132 328 aa25.07■■□□□ 1.6
RPUSD1-202ENST00000561734 SLC4A10Q6U841 1118 aa25.06■■□□□ 1.6
RPUSD1-202ENST00000561734 NGDNQ8NEJ9 315 aaKnown RBP25.06■■□□□ 1.6
RPUSD1-202ENST00000561734 EYA1Q99502 592 aa25.06■■□□□ 1.6
RPUSD1-202ENST00000561734 AMPHP49418 695 aa25.05■■□□□ 1.6
RPUSD1-202ENST00000561734 USP26Q9BXU7 913 aa25.05■■□□□ 1.6
RPUSD1-202ENST00000561734 PANK2Q9BZ23 570 aa25.05■■□□□ 1.6
RPUSD1-202ENST00000561734 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
RPUSD1-202ENST00000561734 IGSF1Q8N6C5 1336 aa25.05■■□□□ 1.6
RPUSD1-202ENST00000561734 RABEP1Q15276 862 aa25.04■■□□□ 1.6
RPUSD1-202ENST00000561734 PIK3C2AO00443 1686 aa25.04■■□□□ 1.6
RPUSD1-202ENST00000561734 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
RPUSD1-202ENST00000561734 SLIT1O75093 1534 aa25.02■■□□□ 1.6
RPUSD1-202ENST00000561734 CCT4P50991 539 aaKnown RBP25.02■■□□□ 1.6
RPUSD1-202ENST00000561734 HMMRO75330 724 aa25.01■■□□□ 1.59
RPUSD1-202ENST00000561734 SSFA2P28290 1259 aa25.01■■□□□ 1.59
RPUSD1-202ENST00000561734 TBX22Q9Y458 520 aa25.01■■□□□ 1.59
RPUSD1-202ENST00000561734 ARHGAP23Q9P227 1491 aa25.01■■□□□ 1.59
RPUSD1-202ENST00000561734 CASC1Q6TDU7 716 aa25■■□□□ 1.59
RPUSD1-202ENST00000561734 MRE11P49959 708 aa25■■□□□ 1.59
RPUSD1-202ENST00000561734 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
RPUSD1-202ENST00000561734 LRRC37A3O60309 1634 aa24.98■■□□□ 1.59
RPUSD1-202ENST00000561734 RRAGDQ9NQL2 400 aaPredicted RBP24.98■■□□□ 1.59
RPUSD1-202ENST00000561734 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.98■■□□□ 1.59
RPUSD1-202ENST00000561734 STK31Q9BXU1 1019 aa24.97■■□□□ 1.59
RPUSD1-202ENST00000561734 NLRP6P59044 892 aa24.97■■□□□ 1.59
RPUSD1-202ENST00000561734 GRPEL1Q9HAV7 217 aa24.97■■□□□ 1.59
RPUSD1-202ENST00000561734 GNAI2P04899 355 aa24.95■■□□□ 1.59
RPUSD1-202ENST00000561734 PTMSP20962 102 aa24.95■■□□□ 1.59
RPUSD1-202ENST00000561734 SKOR2Q2VWA4 1001 aaPredicted RBP24.95■■□□□ 1.59
RPUSD1-202ENST00000561734 HTATSF1O43719 755 aaKnown RBP24.95■■□□□ 1.58
RPUSD1-202ENST00000561734 PDE1AP54750 535 aa24.95■■□□□ 1.58
RPUSD1-202ENST00000561734 NUTM2GQ5VZR2 741 aa24.95■■□□□ 1.58
RPUSD1-202ENST00000561734 FAM208AQ9UK61 1670 aaKnown RBP24.95■■□□□ 1.58
RPUSD1-202ENST00000561734 FLIIQ13045 1269 aa24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 OSBPL3Q9H4L5 887 aa24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 EXOC6BQ9Y2D4 811 aa24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 GNAT3A8MTJ3 354 aa24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 HOXC9P31274 260 aa24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 NECTIN2Q92692 538 aa24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 ISY1Q9ULR0 285 aaKnown RBP24.94■■□□□ 1.58
RPUSD1-202ENST00000561734 REC8O95072 547 aa24.93■■□□□ 1.58
RPUSD1-202ENST00000561734 CLEC17AQ6ZS10 378 aa24.93■■□□□ 1.58
RPUSD1-202ENST00000561734 NWD1Q149M9 1564 aa24.93■■□□□ 1.58
RPUSD1-202ENST00000561734 FKBP5Q13451 457 aaPredicted RBP24.93■■□□□ 1.58
RPUSD1-202ENST00000561734 CCDC30Q5VVM6 783 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms