RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 IGHDP01880 384 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 GCP02774 474 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 MCM10Q7L590 875 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
TUBGCP4-202ENST00000561691 MRPL50Q8N5N7 158 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-202ENST00000561691 KCNH5Q8NCM2 988 aa13.1□□□□□ -0.31
TUBGCP4-202ENST00000561691 ZNF428Q96B54 188 aa13.1□□□□□ -0.31
TUBGCP4-202ENST00000561691 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-202ENST00000561691 NOB1Q9ULX3 412 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 PXDNQ92626 1479 aa13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 NBPF6Q5VWK0 638 aa13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 NBPF4Q96M43 638 aa13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
TUBGCP4-202ENST00000561691 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
TUBGCP4-202ENST00000561691 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
TUBGCP4-202ENST00000561691 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 TCERG1O14776 1098 aaKnown RBP13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 ATF3P18847 181 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 AAMPQ13685 434 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
TUBGCP4-202ENST00000561691 RGPD2P0DJD1 1756 aa13.06□□□□□ -0.32
TUBGCP4-202ENST00000561691 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
TUBGCP4-202ENST00000561691 TWISTNBQ3B726 338 aaPredicted RBP13.06□□□□□ -0.32
TUBGCP4-202ENST00000561691 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
TUBGCP4-202ENST00000561691 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
TUBGCP4-202ENST00000561691 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
TUBGCP4-202ENST00000561691 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 COL18A1P39060 1754 aa13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 MS4A1P11836 297 aa13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 TMEM57Q8N5G2 664 aa13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
TUBGCP4-202ENST00000561691 RGS12O14924 1447 aa13.04□□□□□ -0.32
TUBGCP4-202ENST00000561691 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
TUBGCP4-202ENST00000561691 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
TUBGCP4-202ENST00000561691 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
TUBGCP4-202ENST00000561691 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
TUBGCP4-202ENST00000561691 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
TUBGCP4-202ENST00000561691 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
TUBGCP4-202ENST00000561691 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
TUBGCP4-202ENST00000561691 ABCC4O15439 1325 aa13.03□□□□□ -0.32
TUBGCP4-202ENST00000561691 ZBTB40Q9NUA8 1239 aa13.02□□□□□ -0.32
TUBGCP4-202ENST00000561691 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.32
TUBGCP4-202ENST00000561691 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.33
TUBGCP4-202ENST00000561691 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
TUBGCP4-202ENST00000561691 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
TUBGCP4-202ENST00000561691 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
TUBGCP4-202ENST00000561691 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
TUBGCP4-202ENST00000561691 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
TUBGCP4-202ENST00000561691 ANKRD24Q8TF21 1146 aa13.01□□□□□ -0.33
TUBGCP4-202ENST00000561691 RGPD5Q99666 1765 aa13□□□□□ -0.33
TUBGCP4-202ENST00000561691 FAM208AQ9UK61 1670 aaKnown RBP13□□□□□ -0.33
TUBGCP4-202ENST00000561691 LMOD2Q6P5Q4 547 aa13□□□□□ -0.33
TUBGCP4-202ENST00000561691 BACH2Q9BYV9 841 aa13□□□□□ -0.33
TUBGCP4-202ENST00000561691 DDX19BQ9UMR2 479 aa13□□□□□ -0.33
TUBGCP4-202ENST00000561691 ERBB3P21860 1342 aa13□□□□□ -0.33
TUBGCP4-202ENST00000561691 PDE4AP27815 886 aa13□□□□□ -0.33
TUBGCP4-202ENST00000561691 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
TUBGCP4-202ENST00000561691 ABCC6O95255 1503 aa12.99□□□□□ -0.33
TUBGCP4-202ENST00000561691 ZBTB7BO15156 539 aaPredicted RBP12.99□□□□□ -0.33
TUBGCP4-202ENST00000561691 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
TUBGCP4-202ENST00000561691 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 ADAMTS7Q9UKP4 1686 aa12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 CPDO75976 1380 aa12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
TUBGCP4-202ENST00000561691 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
TUBGCP4-202ENST00000561691 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
TUBGCP4-202ENST00000561691 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
TUBGCP4-202ENST00000561691 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.34
TUBGCP4-202ENST00000561691 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
TUBGCP4-202ENST00000561691 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
TUBGCP4-202ENST00000561691 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
TUBGCP4-202ENST00000561691 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
TUBGCP4-202ENST00000561691 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
TUBGCP4-202ENST00000561691 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 G2E3Q7L622 706 aa12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 MEGF6O75095 1541 aa12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 GSE1Q14687 1217 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms