RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 COL23A1Q86Y22 540 aaPredicted RBP25.99■■□□□ 1.75
COMMD4-204ENST00000561662 SLC12A5Q9H2X9 1139 aa25.99■■□□□ 1.75
COMMD4-204ENST00000561662 CCNL1Q9UK58 526 aaPredicted RBP25.99■■□□□ 1.75
COMMD4-204ENST00000561662 USP54Q70EL1 1684 aa25.99■■□□□ 1.75
COMMD4-204ENST00000561662 NSD2O96028 1365 aa25.98■■□□□ 1.75
COMMD4-204ENST00000561662 NEUROD1Q13562 356 aa25.98■■□□□ 1.75
COMMD4-204ENST00000561662 ZNF526Q8TF50 670 aaPredicted RBP25.98■■□□□ 1.75
COMMD4-204ENST00000561662 DOT1LQ8TEK3 1739 aa25.97■■□□□ 1.75
COMMD4-204ENST00000561662 ANKRD36BQ8N2N9 1353 aa25.97■■□□□ 1.75
COMMD4-204ENST00000561662 HDGFL2Q7Z4V5 671 aaPredicted RBP25.97■■□□□ 1.75
COMMD4-204ENST00000561662 IP6K1Q92551 441 aa25.97■■□□□ 1.75
COMMD4-204ENST00000561662 FBLN1P23142 703 aa25.95■■□□□ 1.74
COMMD4-204ENST00000561662 WWC3Q9ULE0 1092 aa25.94■■□□□ 1.74
COMMD4-204ENST00000561662 LY75O60449 1722 aa25.94■■□□□ 1.74
COMMD4-204ENST00000561662 GPBP1L1Q9HC44 474 aaPredicted RBP25.93■■□□□ 1.74
COMMD4-204ENST00000561662 EDC4Q6P2E9 1401 aaKnown RBP25.92■■□□□ 1.74
COMMD4-204ENST00000561662 ZCRB1Q8TBF4 217 aaKnown RBP25.92■■□□□ 1.74
COMMD4-204ENST00000561662 A0A1W2PP64 1363 aa25.92■■□□□ 1.74
COMMD4-204ENST00000561662 MEGF6O75095 1541 aa25.9■■□□□ 1.74
COMMD4-204ENST00000561662 PCGF6Q9BYE7 350 aa25.9■■□□□ 1.74
COMMD4-204ENST00000561662 USP47Q96K76 1375 aa25.89■■□□□ 1.74
COMMD4-204ENST00000561662 RGPD2P0DJD1 1756 aa25.88■■□□□ 1.73
COMMD4-204ENST00000561662 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
COMMD4-204ENST00000561662 HOXC9P31274 260 aa25.87■■□□□ 1.73
COMMD4-204ENST00000561662 AMPHP49418 695 aa25.87■■□□□ 1.73
COMMD4-204ENST00000561662 USHBP1Q8N6Y0 703 aa25.87■■□□□ 1.73
COMMD4-204ENST00000561662 TERF2IPQ9NYB0 399 aa25.87■■□□□ 1.73
COMMD4-204ENST00000561662 FAM208AQ9UK61 1670 aaKnown RBP25.87■■□□□ 1.73
COMMD4-204ENST00000561662 HSPA6P17066 643 aa25.85■■□□□ 1.73
COMMD4-204ENST00000561662 CARD11Q9BXL7 1154 aa25.85■■□□□ 1.73
COMMD4-204ENST00000561662 SMIM5Q71RC9 77 aa25.84■■□□□ 1.73
COMMD4-204ENST00000561662 CD2APQ9Y5K6 639 aa25.84■■□□□ 1.73
COMMD4-204ENST00000561662 COG3Q96JB2 828 aa25.82■■□□□ 1.72
COMMD4-204ENST00000561662 ADCY9O60503 1353 aa25.82■■□□□ 1.72
COMMD4-204ENST00000561662 NBPF6Q5VWK0 638 aa25.81■■□□□ 1.72
COMMD4-204ENST00000561662 NBPF4Q96M43 638 aa25.81■■□□□ 1.72
COMMD4-204ENST00000561662 AMIGO3Q86WK7 504 aa25.8■■□□□ 1.72
COMMD4-204ENST00000561662 C5P01031 1676 aa25.8■■□□□ 1.72
COMMD4-204ENST00000561662 RRS1Q15050 365 aaKnown RBP25.79■■□□□ 1.72
COMMD4-204ENST00000561662 PHF14O94880 888 aa25.78■■□□□ 1.72
COMMD4-204ENST00000561662 MPRIPQ6WCQ1 1025 aa25.77■■□□□ 1.72
COMMD4-204ENST00000561662 IGSF1Q8N6C5 1336 aa25.77■■□□□ 1.72
COMMD4-204ENST00000561662 PALLDQ8WX93 1383 aa25.77■■□□□ 1.72
COMMD4-204ENST00000561662 RAPGEF4Q8WZA2 1011 aa25.75■■□□□ 1.71
COMMD4-204ENST00000561662 FLAD1Q8NFF5 587 aa25.73■■□□□ 1.71
COMMD4-204ENST00000561662 AK7Q96M32 723 aa25.73■■□□□ 1.71
COMMD4-204ENST00000561662 KIF3CO14782 793 aa25.71■■□□□ 1.71
COMMD4-204ENST00000561662 TATP17735 454 aaPredicted RBP25.71■■□□□ 1.71
COMMD4-204ENST00000561662 TAF1LQ8IZX4 1826 aa25.71■■□□□ 1.71
COMMD4-204ENST00000561662 C4BP0C0L5 1744 aa25.69■■□□□ 1.7
COMMD4-204ENST00000561662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.69■■□□□ 1.7
COMMD4-204ENST00000561662 GGNBP2Q9H3C7 697 aa25.69■■□□□ 1.7
COMMD4-204ENST00000561662 TOGARAM1Q9Y4F4 1720 aa25.68■■□□□ 1.7
COMMD4-204ENST00000561662 CGNL1Q0VF96 1302 aa25.68■■□□□ 1.7
COMMD4-204ENST00000561662 PCDH11XQ9BZA7 1347 aa25.68■■□□□ 1.7
COMMD4-204ENST00000561662 PCDH11YQ9BZA8 1340 aa25.68■■□□□ 1.7
COMMD4-204ENST00000561662 CYP27B1O15528 508 aa25.67■■□□□ 1.7
COMMD4-204ENST00000561662 HSP90AB2PQ58FF8 381 aa25.67■■□□□ 1.7
COMMD4-204ENST00000561662 RTL1A6NKG5 1358 aa25.67■■□□□ 1.7
COMMD4-204ENST00000561662 SMG6Q86US8 1419 aaKnown RBP25.66■■□□□ 1.7
COMMD4-204ENST00000561662 PUS7Q96PZ0 661 aaKnown RBP25.64■■□□□ 1.7
COMMD4-204ENST00000561662 LINC00116Q8NCU8 138 aa25.63■■□□□ 1.69
COMMD4-204ENST00000561662 PIGBQ92521 554 aa25.63■■□□□ 1.69
COMMD4-204ENST00000561662 TESK2Q96S53 571 aa25.63■■□□□ 1.69
COMMD4-204ENST00000561662 UBR3Q6ZT12 1888 aa25.63■■□□□ 1.69
COMMD4-204ENST00000561662 ST20-MTHFSA0A0A6YYL1 179 aa25.62■■□□□ 1.69
COMMD4-204ENST00000561662 FYB1O15117 783 aa25.62■■□□□ 1.69
COMMD4-204ENST00000561662 SMARCC1Q92922 1105 aaPredicted RBP25.62■■□□□ 1.69
COMMD4-204ENST00000561662 ITGB4P16144 1822 aa25.6■■□□□ 1.69
COMMD4-204ENST00000561662 APLP1P51693 650 aa25.59■■□□□ 1.69
COMMD4-204ENST00000561662 GNPATO15228 680 aa25.58■■□□□ 1.69
COMMD4-204ENST00000561662 SSFA2P28290 1259 aa25.58■■□□□ 1.69
COMMD4-204ENST00000561662 LOC102724428A0A0B4J2F2 783 aa25.57■■□□□ 1.68
COMMD4-204ENST00000561662 MMP10P09238 476 aa25.57■■□□□ 1.68
COMMD4-204ENST00000561662 SIK1P57059 783 aa25.57■■□□□ 1.68
COMMD4-204ENST00000561662 INSRP06213 1382 aa25.56■■□□□ 1.68
COMMD4-204ENST00000561662 HMGB2P26583 209 aaKnown RBP25.56■■□□□ 1.68
COMMD4-204ENST00000561662 ITPK1Q13572 414 aa25.56■■□□□ 1.68
COMMD4-204ENST00000561662 DNAJC5GQ8N7S2 189 aa25.56■■□□□ 1.68
COMMD4-204ENST00000561662 BCS1LQ9Y276 419 aa25.56■■□□□ 1.68
COMMD4-204ENST00000561662 NSD3Q9BZ95 1437 aa25.55■■□□□ 1.68
COMMD4-204ENST00000561662 NMRK2Q9NPI5 230 aa25.55■■□□□ 1.68
COMMD4-204ENST00000561662 ASAP1Q9ULH1 1129 aa25.55■■□□□ 1.68
COMMD4-204ENST00000561662 A0A0G2JLW4 131 aa25.54■■□□□ 1.68
COMMD4-204ENST00000561662 EMILIN1Q9Y6C2 1016 aa25.54■■□□□ 1.68
COMMD4-204ENST00000561662 FLT4P35916 1363 aa25.54■■□□□ 1.68
COMMD4-204ENST00000561662 PXDNLA1KZ92 1463 aa25.53■■□□□ 1.68
COMMD4-204ENST00000561662 TOMM70O94826 608 aa25.53■■□□□ 1.68
COMMD4-204ENST00000561662 HTRA3P83110 453 aa25.53■■□□□ 1.68
COMMD4-204ENST00000561662 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
COMMD4-204ENST00000561662 N4BP2Q86UW6 1770 aaPredicted RBP25.52■■□□□ 1.68
COMMD4-204ENST00000561662 MAP2P11137 1827 aaKnown RBP25.52■■□□□ 1.68
COMMD4-204ENST00000561662 ATP6V1AP38606 617 aa25.52■■□□□ 1.68
COMMD4-204ENST00000561662 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
COMMD4-204ENST00000561662 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
COMMD4-204ENST00000561662 PPM1GO15355 546 aaPredicted RBP25.51■■□□□ 1.67
COMMD4-204ENST00000561662 TMOD3Q9NYL9 352 aa25.51■■□□□ 1.67
COMMD4-204ENST00000561662 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
COMMD4-204ENST00000561662 NKX1-1Q15270 411 aaPredicted RBP25.48■■□□□ 1.67
COMMD4-204ENST00000561662 KIAA1551Q9HCM1 1747 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms