RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 FLIIQ13045 1269 aa20.08■□□□□ 0.81
AP4E1-205ENST00000561393 CABP4P57796 275 aa20.08■□□□□ 0.81
AP4E1-205ENST00000561393 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
AP4E1-205ENST00000561393 FOXD4L5Q5VV16 416 aaPredicted RBP20.08■□□□□ 0.8
AP4E1-205ENST00000561393 FOXD4L4Q8WXT5 416 aaPredicted RBP20.08■□□□□ 0.8
AP4E1-205ENST00000561393 CABLES1Q8TDN4 633 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 GCP02774 474 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 NFKBIBQ15653 356 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 AMOTQ4VCS5 1084 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 IL1RAPL2Q9NP60 686 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 CAMSAP1Q5T5Y3 1602 aa20.07■□□□□ 0.8
AP4E1-205ENST00000561393 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
AP4E1-205ENST00000561393 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
AP4E1-205ENST00000561393 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
AP4E1-205ENST00000561393 SRGAP3O43295 1099 aa20.06■□□□□ 0.8
AP4E1-205ENST00000561393 ARHGAP45Q92619 1136 aa20.06■□□□□ 0.8
AP4E1-205ENST00000561393 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
AP4E1-205ENST00000561393 HSP90AB4PQ58FF6 505 aa20.05■□□□□ 0.8
AP4E1-205ENST00000561393 MEIS3Q99687 375 aa20.05■□□□□ 0.8
AP4E1-205ENST00000561393 LRRCC1Q9C099 1032 aa20.05■□□□□ 0.8
AP4E1-205ENST00000561393 CLASRPQ8N2M8 674 aaKnown RBP20.04■□□□□ 0.8
AP4E1-205ENST00000561393 LAMC1P11047 1609 aa20.04■□□□□ 0.8
AP4E1-205ENST00000561393 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
AP4E1-205ENST00000561393 HDAC1Q13547 482 aaPredicted RBP20.03■□□□□ 0.8
AP4E1-205ENST00000561393 PTPRCP08575 1304 aa20.02■□□□□ 0.8
AP4E1-205ENST00000561393 ZBTB40Q9NUA8 1239 aa20.02■□□□□ 0.8
AP4E1-205ENST00000561393 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
AP4E1-205ENST00000561393 C8orf34Q49A92 452 aa20.01■□□□□ 0.79
AP4E1-205ENST00000561393 FRMPD1Q5SYB0 1578 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
AP4E1-205ENST00000561393 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
AP4E1-205ENST00000561393 SIL1Q9H173 461 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 CHMP5Q9NZZ3 219 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
AP4E1-205ENST00000561393 SBNO1A3KN83 1393 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 TRIM44Q96DX7 344 aaPredicted RBP20■□□□□ 0.79
AP4E1-205ENST00000561393 SETBP1Q9Y6X0 1596 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 ATP7BP35670 1465 aa20■□□□□ 0.79
AP4E1-205ENST00000561393 IP6K1Q92551 441 aa19.99■□□□□ 0.79
AP4E1-205ENST00000561393 NEXMIFQ5QGS0 1516 aa19.99■□□□□ 0.79
AP4E1-205ENST00000561393 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
AP4E1-205ENST00000561393 FOXD4L6Q3SYB3 417 aaPredicted RBP19.99■□□□□ 0.79
AP4E1-205ENST00000561393 FOXD4L3Q6VB84 417 aaPredicted RBP19.99■□□□□ 0.79
AP4E1-205ENST00000561393 MAP4K4O95819 1239 aaPredicted RBP19.99■□□□□ 0.79
AP4E1-205ENST00000561393 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
AP4E1-205ENST00000561393 TULP4Q9NRJ4 1543 aa19.98■□□□□ 0.79
AP4E1-205ENST00000561393 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
AP4E1-205ENST00000561393 PI4KAP2A4QPH2 592 aa19.98■□□□□ 0.79
AP4E1-205ENST00000561393 PI4KAP1Q8N8J0 262 aa19.98■□□□□ 0.79
AP4E1-205ENST00000561393 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
AP4E1-205ENST00000561393 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
AP4E1-205ENST00000561393 FAM135BQ49AJ0 1406 aa19.97■□□□□ 0.79
AP4E1-205ENST00000561393 CHL1O00533 1208 aa19.97■□□□□ 0.79
AP4E1-205ENST00000561393 DNAAF4Q8WXU2 420 aa19.97■□□□□ 0.79
AP4E1-205ENST00000561393 ERC2O15083 957 aa19.97■□□□□ 0.79
AP4E1-205ENST00000561393 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
AP4E1-205ENST00000561393 G2E3Q7L622 706 aa19.97■□□□□ 0.79
AP4E1-205ENST00000561393 NEUROD6Q96NK8 337 aa19.97■□□□□ 0.79
AP4E1-205ENST00000561393 DEPDC5O75140 1603 aa19.96■□□□□ 0.79
AP4E1-205ENST00000561393 RUFY2Q8WXA3 655 aa19.96■□□□□ 0.79
AP4E1-205ENST00000561393 DBF4Q9UBU7 674 aaPredicted RBP19.96■□□□□ 0.79
AP4E1-205ENST00000561393 SLC39A6Q13433 755 aa19.96■□□□□ 0.79
AP4E1-205ENST00000561393 NPHP3Q7Z494 1330 aa19.96■□□□□ 0.79
AP4E1-205ENST00000561393 GTF2E1P29083 439 aaPredicted RBP19.95■□□□□ 0.78
AP4E1-205ENST00000561393 NUTM1Q86Y26 1132 aa19.95■□□□□ 0.78
AP4E1-205ENST00000561393 NUCB1Q02818 461 aa19.95■□□□□ 0.78
AP4E1-205ENST00000561393 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
AP4E1-205ENST00000561393 NUTM2BA6NNL0 878 aaPredicted RBP19.95■□□□□ 0.78
AP4E1-205ENST00000561393 NUTM2EB1AL46 878 aaPredicted RBP19.95■□□□□ 0.78
AP4E1-205ENST00000561393 ZBTB7BO15156 539 aaPredicted RBP19.95■□□□□ 0.78
AP4E1-205ENST00000561393 NUTM2AQ8IVF1 878 aaPredicted RBP19.95■□□□□ 0.78
AP4E1-205ENST00000561393 MSH6P52701 1360 aa19.94■□□□□ 0.78
AP4E1-205ENST00000561393 GSE1Q14687 1217 aa19.94■□□□□ 0.78
AP4E1-205ENST00000561393 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
AP4E1-205ENST00000561393 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
AP4E1-205ENST00000561393 AATKQ6ZMQ8 1374 aa19.94■□□□□ 0.78
AP4E1-205ENST00000561393 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
AP4E1-205ENST00000561393 HTATSF1O43719 755 aaKnown RBP19.93■□□□□ 0.78
AP4E1-205ENST00000561393 SEC24BO95487 1268 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 IQGAP1P46940 1657 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 USP6P35125 1406 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 NRXN1Q9ULB1 1477 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 SMC5Q8IY18 1101 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 PIK3C2BO00750 1634 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 TSHZ3Q63HK5 1081 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 DIP2BQ9P265 1576 aa19.93■□□□□ 0.78
AP4E1-205ENST00000561393 MAP3K5Q99683 1374 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 NEK4P51957 841 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 AKAP4Q5JQC9 854 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 PTPRMP28827 1452 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 IFNL2Q8IZJ0 200 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 CNTROBQ8N137 903 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 LGR6Q9HBX8 967 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 PLCB2Q00722 1185 aa19.92■□□□□ 0.78
AP4E1-205ENST00000561393 C16orf71Q8IYS4 520 aaPredicted RBP19.91■□□□□ 0.78
AP4E1-205ENST00000561393 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
AP4E1-205ENST00000561393 ANKRD44Q8N8A2 993 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms