RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 CCNL1Q9UK58 526 aaPredicted RBP16.8■□□□□ 0.28
IRF9-213ENST00000561342 IGSF1Q8N6C5 1336 aa16.79■□□□□ 0.28
IRF9-213ENST00000561342 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
IRF9-213ENST00000561342 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
IRF9-213ENST00000561342 ERBB3P21860 1342 aa16.78■□□□□ 0.28
IRF9-213ENST00000561342 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
IRF9-213ENST00000561342 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
IRF9-213ENST00000561342 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
IRF9-213ENST00000561342 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
IRF9-213ENST00000561342 RBM46Q8TBY0 533 aaKnown RBP16.77■□□□□ 0.28
IRF9-213ENST00000561342 PIK3C2AO00443 1686 aa16.77■□□□□ 0.28
IRF9-213ENST00000561342 HTRA3P83110 453 aa16.76■□□□□ 0.27
IRF9-213ENST00000561342 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
IRF9-213ENST00000561342 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
IRF9-213ENST00000561342 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
IRF9-213ENST00000561342 FSTL1Q12841 308 aa16.74■□□□□ 0.27
IRF9-213ENST00000561342 NMRK2Q9NPI5 230 aa16.74■□□□□ 0.27
IRF9-213ENST00000561342 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
IRF9-213ENST00000561342 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
IRF9-213ENST00000561342 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
IRF9-213ENST00000561342 ANKRD24Q8TF21 1146 aa16.72■□□□□ 0.27
IRF9-213ENST00000561342 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
IRF9-213ENST00000561342 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
IRF9-213ENST00000561342 USP47Q96K76 1375 aa16.71■□□□□ 0.27
IRF9-213ENST00000561342 NFAT5O94916 1531 aa16.7■□□□□ 0.26
IRF9-213ENST00000561342 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
IRF9-213ENST00000561342 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
IRF9-213ENST00000561342 WDR90Q96KV7 1748 aa16.7■□□□□ 0.26
IRF9-213ENST00000561342 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
IRF9-213ENST00000561342 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
IRF9-213ENST00000561342 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
IRF9-213ENST00000561342 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
IRF9-213ENST00000561342 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
IRF9-213ENST00000561342 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
IRF9-213ENST00000561342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
IRF9-213ENST00000561342 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
IRF9-213ENST00000561342 MON2Q7Z3U7 1717 aa16.67■□□□□ 0.26
IRF9-213ENST00000561342 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
IRF9-213ENST00000561342 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
IRF9-213ENST00000561342 NSD2O96028 1365 aa16.66■□□□□ 0.26
IRF9-213ENST00000561342 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
IRF9-213ENST00000561342 ARHGAP27Q6ZUM4 889 aa16.65■□□□□ 0.26
IRF9-213ENST00000561342 NME9Q86XW9 330 aa16.64■□□□□ 0.25
IRF9-213ENST00000561342 AK7Q96M32 723 aa16.64■□□□□ 0.25
IRF9-213ENST00000561342 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
IRF9-213ENST00000561342 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
IRF9-213ENST00000561342 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
IRF9-213ENST00000561342 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
IRF9-213ENST00000561342 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
IRF9-213ENST00000561342 PHF14O94880 888 aa16.62■□□□□ 0.25
IRF9-213ENST00000561342 SMC1BQ8NDV3 1235 aa16.62■□□□□ 0.25
IRF9-213ENST00000561342 A0A1W2PP64 1363 aa16.62■□□□□ 0.25
IRF9-213ENST00000561342 LY75O60449 1722 aa16.62■□□□□ 0.25
IRF9-213ENST00000561342 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
IRF9-213ENST00000561342 TGFB2P61812 414 aa16.6■□□□□ 0.25
IRF9-213ENST00000561342 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
IRF9-213ENST00000561342 TESK2Q96S53 571 aa16.6■□□□□ 0.25
IRF9-213ENST00000561342 NSD3Q9BZ95 1437 aa16.6■□□□□ 0.25
IRF9-213ENST00000561342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.59■□□□□ 0.25
IRF9-213ENST00000561342 C9orf131Q5VYM1 1079 aa16.59■□□□□ 0.25
IRF9-213ENST00000561342 IP6K1Q92551 441 aa16.58■□□□□ 0.24
IRF9-213ENST00000561342 RRAGCQ9HB90 399 aa16.58■□□□□ 0.24
IRF9-213ENST00000561342 PALLDQ8WX93 1383 aa16.57■□□□□ 0.24
IRF9-213ENST00000561342 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
IRF9-213ENST00000561342 FCHSD2O94868 740 aa16.57■□□□□ 0.24
IRF9-213ENST00000561342 SSFA2P28290 1259 aa16.57■□□□□ 0.24
IRF9-213ENST00000561342 PCNTO95613 3336 aa16.57■□□□□ 0.24
IRF9-213ENST00000561342 A0A0G2JLW4 131 aa16.56■□□□□ 0.24
IRF9-213ENST00000561342 COG3Q96JB2 828 aa16.56■□□□□ 0.24
IRF9-213ENST00000561342 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
IRF9-213ENST00000561342 MMP10P09238 476 aa16.55■□□□□ 0.24
IRF9-213ENST00000561342 AMIGO3Q86WK7 504 aa16.55■□□□□ 0.24
IRF9-213ENST00000561342 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
IRF9-213ENST00000561342 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
IRF9-213ENST00000561342 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
IRF9-213ENST00000561342 TMF1P82094 1093 aa16.53■□□□□ 0.24
IRF9-213ENST00000561342 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
IRF9-213ENST00000561342 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
IRF9-213ENST00000561342 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
IRF9-213ENST00000561342 KCPQ6ZWJ8 1503 aa16.53■□□□□ 0.24
IRF9-213ENST00000561342 LTN1O94822 1766 aa16.53■□□□□ 0.24
IRF9-213ENST00000561342 RNF181Q9P0P0 153 aa16.52■□□□□ 0.24
IRF9-213ENST00000561342 C5P01031 1676 aa16.52■□□□□ 0.23
IRF9-213ENST00000561342 RTL1A6NKG5 1358 aa16.51■□□□□ 0.23
IRF9-213ENST00000561342 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
IRF9-213ENST00000561342 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
IRF9-213ENST00000561342 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
IRF9-213ENST00000561342 DPEP1P16444 411 aa16.5■□□□□ 0.23
IRF9-213ENST00000561342 HOXC9P31274 260 aa16.5■□□□□ 0.23
IRF9-213ENST00000561342 AMPHP49418 695 aa16.5■□□□□ 0.23
IRF9-213ENST00000561342 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
IRF9-213ENST00000561342 RAPGEF4Q8WZA2 1011 aa16.49■□□□□ 0.23
IRF9-213ENST00000561342 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
IRF9-213ENST00000561342 TIMELESSQ9UNS1 1208 aa16.49■□□□□ 0.23
IRF9-213ENST00000561342 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
IRF9-213ENST00000561342 GNPATO15228 680 aa16.48■□□□□ 0.23
IRF9-213ENST00000561342 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
IRF9-213ENST00000561342 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
IRF9-213ENST00000561342 MEGF6O75095 1541 aa16.48■□□□□ 0.23
IRF9-213ENST00000561342 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms