RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
SHF-210ENST00000561239 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
SHF-210ENST00000561239 RGPD2P0DJD1 1756 aa18.37■□□□□ 0.53
SHF-210ENST00000561239 RGPD3A6NKT7 1758 aaPredicted RBP18.36■□□□□ 0.53
SHF-210ENST00000561239 MEGF6O75095 1541 aa18.36■□□□□ 0.53
SHF-210ENST00000561239 RGPD4Q7Z3J3 1758 aa18.36■□□□□ 0.53
SHF-210ENST00000561239 ACSBG1Q96GR2 724 aa18.35■□□□□ 0.53
SHF-210ENST00000561239 PCDH11XQ9BZA7 1347 aa18.34■□□□□ 0.53
SHF-210ENST00000561239 PCDH11YQ9BZA8 1340 aa18.34■□□□□ 0.53
SHF-210ENST00000561239 KCNQ2O43526 872 aa18.34■□□□□ 0.53
SHF-210ENST00000561239 MTHFSP49914 203 aa18.34■□□□□ 0.53
SHF-210ENST00000561239 NHSQ6T4R5 1651 aa18.34■□□□□ 0.53
SHF-210ENST00000561239 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.52
SHF-210ENST00000561239 EYA1Q99502 592 aa18.33■□□□□ 0.52
SHF-210ENST00000561239 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
SHF-210ENST00000561239 RREB1Q92766 1687 aa18.33■□□□□ 0.52
SHF-210ENST00000561239 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
SHF-210ENST00000561239 PLEKHG2Q9H7P9 1386 aa18.32■□□□□ 0.52
SHF-210ENST00000561239 R3HDM1Q15032 1099 aaKnown RBP18.32■□□□□ 0.52
SHF-210ENST00000561239 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
SHF-210ENST00000561239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHF-210ENST00000561239 PSDA5PKW4 1024 aaPredicted RBP18.31■□□□□ 0.52
SHF-210ENST00000561239 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
SHF-210ENST00000561239 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
SHF-210ENST00000561239 IL13P35225 146 aa18.3■□□□□ 0.52
SHF-210ENST00000561239 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
SHF-210ENST00000561239 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
SHF-210ENST00000561239 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
SHF-210ENST00000561239 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
SHF-210ENST00000561239 SHANK3Q9BYB0 1731 aa18.27■□□□□ 0.52
SHF-210ENST00000561239 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.52
SHF-210ENST00000561239 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
SHF-210ENST00000561239 PROM2Q8N271 834 aa18.27■□□□□ 0.52
SHF-210ENST00000561239 RALBP1Q15311 655 aa18.26■□□□□ 0.51
SHF-210ENST00000561239 KDRP35968 1356 aa18.26■□□□□ 0.51
SHF-210ENST00000561239 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
SHF-210ENST00000561239 CYP27B1O15528 508 aa18.25■□□□□ 0.51
SHF-210ENST00000561239 SLC27A3Q5K4L6 730 aa18.25■□□□□ 0.51
SHF-210ENST00000561239 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
SHF-210ENST00000561239 STK32BQ9NY57 414 aa18.25■□□□□ 0.51
SHF-210ENST00000561239 BTAF1O14981 1849 aa18.25■□□□□ 0.51
SHF-210ENST00000561239 PKD1L3Q7Z443 1732 aa18.24■□□□□ 0.51
SHF-210ENST00000561239 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
SHF-210ENST00000561239 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
SHF-210ENST00000561239 PLEKHO1Q53GL0 409 aaPredicted RBP18.23■□□□□ 0.51
SHF-210ENST00000561239 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
SHF-210ENST00000561239 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
SHF-210ENST00000561239 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
SHF-210ENST00000561239 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
SHF-210ENST00000561239 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
SHF-210ENST00000561239 LRP5O75197 1615 aa18.2■□□□□ 0.5
SHF-210ENST00000561239 PHKG2P15735 406 aa18.2■□□□□ 0.5
SHF-210ENST00000561239 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
SHF-210ENST00000561239 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
SHF-210ENST00000561239 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
SHF-210ENST00000561239 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
SHF-210ENST00000561239 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
SHF-210ENST00000561239 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
SHF-210ENST00000561239 SRCAPQ6ZRS2 3230 aa18.18■□□□□ 0.5
SHF-210ENST00000561239 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
SHF-210ENST00000561239 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
SHF-210ENST00000561239 SPON1Q9HCB6 807 aa18.17■□□□□ 0.5
SHF-210ENST00000561239 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
SHF-210ENST00000561239 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
SHF-210ENST00000561239 TMOD3Q9NYL9 352 aa18.16■□□□□ 0.5
SHF-210ENST00000561239 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
SHF-210ENST00000561239 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
SHF-210ENST00000561239 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
SHF-210ENST00000561239 LY75O60449 1722 aa18.13■□□□□ 0.49
SHF-210ENST00000561239 PIGBQ92521 554 aa18.13■□□□□ 0.49
SHF-210ENST00000561239 PALLDQ8WX93 1383 aa18.13■□□□□ 0.49
SHF-210ENST00000561239 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
SHF-210ENST00000561239 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
SHF-210ENST00000561239 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
SHF-210ENST00000561239 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
SHF-210ENST00000561239 HMOX1P09601 288 aa18.11■□□□□ 0.49
SHF-210ENST00000561239 RSPH6AQ9H0K4 717 aa18.11■□□□□ 0.49
SHF-210ENST00000561239 TFCP2L1Q9NZI6 479 aa18.11■□□□□ 0.49
SHF-210ENST00000561239 ITGB4P16144 1822 aa18.1■□□□□ 0.49
SHF-210ENST00000561239 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
SHF-210ENST00000561239 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
SHF-210ENST00000561239 MTFR1LQ9H019 292 aa18.1■□□□□ 0.49
SHF-210ENST00000561239 PPP1R1BQ9UD71 204 aaPredicted RBP18.1■□□□□ 0.49
SHF-210ENST00000561239 CABP4P57796 275 aa18.09■□□□□ 0.49
SHF-210ENST00000561239 ZNF827Q17R98 1081 aa18.09■□□□□ 0.49
SHF-210ENST00000561239 SLC16A10Q8TF71 515 aa18.08■□□□□ 0.48
SHF-210ENST00000561239 CASZ1Q86V15 1759 aa18.08■□□□□ 0.48
SHF-210ENST00000561239 FCHSD2O94868 740 aa18.07■□□□□ 0.48
SHF-210ENST00000561239 ZBTB7AO95365 584 aa18.07■□□□□ 0.48
SHF-210ENST00000561239 KCNQ4P56696 695 aa18.07■□□□□ 0.48
SHF-210ENST00000561239 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
SHF-210ENST00000561239 U2AF1L5P0DN76 240 aaPredicted RBP18.06■□□□□ 0.48
SHF-210ENST00000561239 SIK1P57059 783 aa18.06■□□□□ 0.48
SHF-210ENST00000561239 U2AF1Q01081 240 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHF-210ENST00000561239 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
SHF-210ENST00000561239 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
SHF-210ENST00000561239 ASAP1Q9ULH1 1129 aa18.06■□□□□ 0.48
SHF-210ENST00000561239 MTHFSDQ2M296 383 aaKnown RBP18.05■□□□□ 0.48
SHF-210ENST00000561239 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
SHF-210ENST00000561239 ADAMTS7Q9UKP4 1686 aa18.05■□□□□ 0.48
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