RNA–Protein interactions for RNA: ENST00000561106.1

SEMA6D-216, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-216ENST00000561106 NCAPD2Q15021 1401 aa19.61■□□□□ 0.73
SEMA6D-216ENST00000561106 KCNQ2O43526 872 aa19.61■□□□□ 0.73
SEMA6D-216ENST00000561106 TATP17735 454 aaPredicted RBP19.61■□□□□ 0.73
SEMA6D-216ENST00000561106 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
SEMA6D-216ENST00000561106 EZH2Q15910 746 aaKnown RBP19.61■□□□□ 0.73
SEMA6D-216ENST00000561106 BCL11BQ9C0K0 894 aaPredicted RBP19.61■□□□□ 0.73
SEMA6D-216ENST00000561106 ACSBG1Q96GR2 724 aa19.6■□□□□ 0.73
SEMA6D-216ENST00000561106 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
SEMA6D-216ENST00000561106 IL13P35225 146 aa19.57■□□□□ 0.72
SEMA6D-216ENST00000561106 IGSF1Q8N6C5 1336 aa19.56■□□□□ 0.72
SEMA6D-216ENST00000561106 PLSCR1O15162 318 aa19.55■□□□□ 0.72
SEMA6D-216ENST00000561106 CYP27B1O15528 508 aa19.55■□□□□ 0.72
SEMA6D-216ENST00000561106 AEBP1Q8IUX7 1158 aa19.54■□□□□ 0.72
SEMA6D-216ENST00000561106 PROM2Q8N271 834 aa19.54■□□□□ 0.72
SEMA6D-216ENST00000561106 DDX10Q13206 875 aaKnown RBP19.53■□□□□ 0.72
SEMA6D-216ENST00000561106 PRIM1P49642 420 aaKnown RBP19.52■□□□□ 0.72
SEMA6D-216ENST00000561106 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.52■□□□□ 0.72
SEMA6D-216ENST00000561106 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
SEMA6D-216ENST00000561106 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
SEMA6D-216ENST00000561106 NHSQ6T4R5 1651 aa19.51■□□□□ 0.71
SEMA6D-216ENST00000561106 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
SEMA6D-216ENST00000561106 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
SEMA6D-216ENST00000561106 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
SEMA6D-216ENST00000561106 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
SEMA6D-216ENST00000561106 SULT6B1Q6IMI4 303 aa19.5■□□□□ 0.71
SEMA6D-216ENST00000561106 BTAF1O14981 1849 aa19.49■□□□□ 0.71
SEMA6D-216ENST00000561106 DIAPH1O60610 1272 aaKnown RBP19.49■□□□□ 0.71
SEMA6D-216ENST00000561106 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
SEMA6D-216ENST00000561106 RREB1Q92766 1687 aa19.48■□□□□ 0.71
SEMA6D-216ENST00000561106 PSDA5PKW4 1024 aaPredicted RBP19.47■□□□□ 0.71
SEMA6D-216ENST00000561106 SYTL4Q96C24 671 aaPredicted RBP19.47■□□□□ 0.71
SEMA6D-216ENST00000561106 COL3A1P02461 1466 aaPredicted RBP19.47■□□□□ 0.71
SEMA6D-216ENST00000561106 KDRP35968 1356 aa19.46■□□□□ 0.71
SEMA6D-216ENST00000561106 DOT1LQ8TEK3 1739 aa19.46■□□□□ 0.71
SEMA6D-216ENST00000561106 TXNRD1Q16881 649 aa19.46■□□□□ 0.71
SEMA6D-216ENST00000561106 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
SEMA6D-216ENST00000561106 RGPD3A6NKT7 1758 aaPredicted RBP19.45■□□□□ 0.7
SEMA6D-216ENST00000561106 RGPD4Q7Z3J3 1758 aa19.45■□□□□ 0.7
SEMA6D-216ENST00000561106 HMOX1P09601 288 aa19.45■□□□□ 0.7
SEMA6D-216ENST00000561106 PHKG2P15735 406 aa19.45■□□□□ 0.7
SEMA6D-216ENST00000561106 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
SEMA6D-216ENST00000561106 R3HDM1Q15032 1099 aaKnown RBP19.44■□□□□ 0.7
SEMA6D-216ENST00000561106 IFNL2Q8IZJ0 200 aa19.44■□□□□ 0.7
SEMA6D-216ENST00000561106 PLEKHG2Q9H7P9 1386 aa19.43■□□□□ 0.7
SEMA6D-216ENST00000561106 ITGB4P16144 1822 aa19.42■□□□□ 0.7
SEMA6D-216ENST00000561106 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
SEMA6D-216ENST00000561106 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
SEMA6D-216ENST00000561106 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
SEMA6D-216ENST00000561106 NBPF14Q5TI25 921 aa19.41■□□□□ 0.7
SEMA6D-216ENST00000561106 ZNF530Q6P9A1 599 aaPredicted RBP19.41■□□□□ 0.7
SEMA6D-216ENST00000561106 MPRIPQ6WCQ1 1025 aa19.41■□□□□ 0.7
SEMA6D-216ENST00000561106 LRRC4BQ9NT99 713 aa19.41■□□□□ 0.7
SEMA6D-216ENST00000561106 PIGBQ92521 554 aa19.4■□□□□ 0.7
SEMA6D-216ENST00000561106 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
SEMA6D-216ENST00000561106 ANO8Q9HCE9 1232 aaPredicted RBP19.4■□□□□ 0.7
SEMA6D-216ENST00000561106 KCNQ4P56696 695 aa19.39■□□□□ 0.69
SEMA6D-216ENST00000561106 RALBP1Q15311 655 aa19.36■□□□□ 0.69
SEMA6D-216ENST00000561106 MTHFSDQ2M296 383 aaKnown RBP19.36■□□□□ 0.69
SEMA6D-216ENST00000561106 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
SEMA6D-216ENST00000561106 LY75O60449 1722 aa19.35■□□□□ 0.69
SEMA6D-216ENST00000561106 ZNF316A6NFI3 1004 aaPredicted RBP19.35■□□□□ 0.69
SEMA6D-216ENST00000561106 HSP90AB1P08238 724 aaKnown RBP19.35■□□□□ 0.69
SEMA6D-216ENST00000561106 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
SEMA6D-216ENST00000561106 ERVV-2B6SEH9 535 aa19.34■□□□□ 0.69
SEMA6D-216ENST00000561106 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
SEMA6D-216ENST00000561106 SLC27A3Q5K4L6 730 aa19.34■□□□□ 0.69
SEMA6D-216ENST00000561106 TMOD3Q9NYL9 352 aa19.34■□□□□ 0.69
SEMA6D-216ENST00000561106 NUDCQ9Y266 331 aa19.34■□□□□ 0.69
SEMA6D-216ENST00000561106 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
SEMA6D-216ENST00000561106 PHACTR3Q96KR7 559 aa19.33■□□□□ 0.68
SEMA6D-216ENST00000561106 PDGFDQ9GZP0 370 aaPredicted RBP19.33■□□□□ 0.68
SEMA6D-216ENST00000561106 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
SEMA6D-216ENST00000561106 ASAP1Q9ULH1 1129 aa19.33■□□□□ 0.68
SEMA6D-216ENST00000561106 U2AF1L5P0DN76 240 aaPredicted RBP19.32■□□□□ 0.68
SEMA6D-216ENST00000561106 U2AF1Q01081 240 aaKnown RBP eCLIP19.32■□□□□ 0.68
SEMA6D-216ENST00000561106 AKAP4Q5JQC9 854 aa19.32■□□□□ 0.68
SEMA6D-216ENST00000561106 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
SEMA6D-216ENST00000561106 STK32BQ9NY57 414 aa19.32■□□□□ 0.68
SEMA6D-216ENST00000561106 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
SEMA6D-216ENST00000561106 ZNF827Q17R98 1081 aa19.31■□□□□ 0.68
SEMA6D-216ENST00000561106 SMARCC1Q92922 1105 aaPredicted RBP19.31■□□□□ 0.68
SEMA6D-216ENST00000561106 ATG3Q9NT62 314 aa19.31■□□□□ 0.68
SEMA6D-216ENST00000561106 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
SEMA6D-216ENST00000561106 PAPPAQ13219 1627 aa19.3■□□□□ 0.68
SEMA6D-216ENST00000561106 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
SEMA6D-216ENST00000561106 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
SEMA6D-216ENST00000561106 AKT1S1Q96B36 256 aa19.3■□□□□ 0.68
SEMA6D-216ENST00000561106 SCN11AQ9UI33 1791 aa19.29■□□□□ 0.68
SEMA6D-216ENST00000561106 FCHSD2O94868 740 aa19.29■□□□□ 0.68
SEMA6D-216ENST00000561106 CABP4P57796 275 aa19.29■□□□□ 0.68
SEMA6D-216ENST00000561106 RNMTO43148 476 aaKnown RBP19.28■□□□□ 0.68
SEMA6D-216ENST00000561106 VIRMAQ69YN4 1812 aaKnown RBP19.28■□□□□ 0.68
SEMA6D-216ENST00000561106 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.68
SEMA6D-216ENST00000561106 MYBBP1AQ9BQG0 1328 aaKnown RBP19.26■□□□□ 0.67
SEMA6D-216ENST00000561106 LOC102724428A0A0B4J2F2 783 aa19.26■□□□□ 0.67
SEMA6D-216ENST00000561106 SIK1P57059 783 aa19.26■□□□□ 0.67
SEMA6D-216ENST00000561106 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
SEMA6D-216ENST00000561106 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
SEMA6D-216ENST00000561106 GAS2L2Q8NHY3 880 aa19.25■□□□□ 0.67
SEMA6D-216ENST00000561106 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms