RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
LRRC49-227ENST00000561081 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
LRRC49-227ENST00000561081 API5Q9BZZ5 524 aaKnown RBP13.45□□□□□ -0.26
LRRC49-227ENST00000561081 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
LRRC49-227ENST00000561081 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
LRRC49-227ENST00000561081 PSME1Q06323 249 aa13.44□□□□□ -0.26
LRRC49-227ENST00000561081 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
LRRC49-227ENST00000561081 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
LRRC49-227ENST00000561081 USP19O94966 1318 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 SEC24BO95487 1268 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 IP6K1Q92551 441 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 LTV1Q96GA3 475 aaPredicted RBP13.41□□□□□ -0.26
LRRC49-227ENST00000561081 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 RGS12O14924 1447 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 PHRF1Q9P1Y6 1649 aaKnown RBP13.41□□□□□ -0.26
LRRC49-227ENST00000561081 NUCB1Q02818 461 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
LRRC49-227ENST00000561081 KCNH5Q8NCM2 988 aa13.4□□□□□ -0.26
LRRC49-227ENST00000561081 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
LRRC49-227ENST00000561081 GNAT3A8MTJ3 354 aa13.4□□□□□ -0.26
LRRC49-227ENST00000561081 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
LRRC49-227ENST00000561081 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
LRRC49-227ENST00000561081 MAP3K5Q99683 1374 aa13.39□□□□□ -0.27
LRRC49-227ENST00000561081 PTPRCP08575 1304 aa13.39□□□□□ -0.27
LRRC49-227ENST00000561081 MSH6P52701 1360 aa13.38□□□□□ -0.27
LRRC49-227ENST00000561081 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
LRRC49-227ENST00000561081 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
LRRC49-227ENST00000561081 SLIT3O75094 1523 aa13.37□□□□□ -0.27
LRRC49-227ENST00000561081 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
LRRC49-227ENST00000561081 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
LRRC49-227ENST00000561081 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
LRRC49-227ENST00000561081 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
LRRC49-227ENST00000561081 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
LRRC49-227ENST00000561081 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
LRRC49-227ENST00000561081 KIF1AQ12756 1690 aa13.36□□□□□ -0.27
LRRC49-227ENST00000561081 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
LRRC49-227ENST00000561081 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
LRRC49-227ENST00000561081 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
LRRC49-227ENST00000561081 C1orf167Q5SNV9 1468 aa13.36□□□□□ -0.27
LRRC49-227ENST00000561081 GCP02774 474 aa13.35□□□□□ -0.27
LRRC49-227ENST00000561081 LNPKQ9C0E8 428 aa13.35□□□□□ -0.27
LRRC49-227ENST00000561081 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
LRRC49-227ENST00000561081 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
LRRC49-227ENST00000561081 NBR1Q14596 966 aa13.35□□□□□ -0.27
LRRC49-227ENST00000561081 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
LRRC49-227ENST00000561081 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
LRRC49-227ENST00000561081 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
LRRC49-227ENST00000561081 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.27
LRRC49-227ENST00000561081 UPF2Q9HAU5 1272 aaKnown RBP13.33□□□□□ -0.27
LRRC49-227ENST00000561081 DAXXQ9UER7 740 aaPredicted RBP13.33□□□□□ -0.27
LRRC49-227ENST00000561081 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
LRRC49-227ENST00000561081 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
LRRC49-227ENST00000561081 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
LRRC49-227ENST00000561081 KRT28Q7Z3Y7 464 aa13.33□□□□□ -0.28
LRRC49-227ENST00000561081 MST1RQ04912 1400 aa13.33□□□□□ -0.28
LRRC49-227ENST00000561081 G2E3Q7L622 706 aa13.33□□□□□ -0.28
LRRC49-227ENST00000561081 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
LRRC49-227ENST00000561081 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
LRRC49-227ENST00000561081 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
LRRC49-227ENST00000561081 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
LRRC49-227ENST00000561081 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
LRRC49-227ENST00000561081 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
LRRC49-227ENST00000561081 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
LRRC49-227ENST00000561081 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
LRRC49-227ENST00000561081 CCDC30Q5VVM6 783 aa13.31□□□□□ -0.28
LRRC49-227ENST00000561081 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
LRRC49-227ENST00000561081 STK31Q9BXU1 1019 aa13.31□□□□□ -0.28
LRRC49-227ENST00000561081 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
LRRC49-227ENST00000561081 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
LRRC49-227ENST00000561081 ANKRD44Q8N8A2 993 aa13.31□□□□□ -0.28
LRRC49-227ENST00000561081 DCTPP1Q9H773 170 aa13.3□□□□□ -0.28
LRRC49-227ENST00000561081 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
LRRC49-227ENST00000561081 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
LRRC49-227ENST00000561081 MEIS3Q99687 375 aa13.3□□□□□ -0.28
LRRC49-227ENST00000561081 CAMTA1Q9Y6Y1 1673 aa13.3□□□□□ -0.28
LRRC49-227ENST00000561081 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
LRRC49-227ENST00000561081 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
LRRC49-227ENST00000561081 DCCP43146 1447 aa13.29□□□□□ -0.28
LRRC49-227ENST00000561081 ATF3P18847 181 aa13.29□□□□□ -0.28
LRRC49-227ENST00000561081 BMP2KLQ5H9B9 411 aa13.29□□□□□ -0.28
LRRC49-227ENST00000561081 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
LRRC49-227ENST00000561081 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
LRRC49-227ENST00000561081 F6X3S4 739 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 FLIIQ13045 1269 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
LRRC49-227ENST00000561081 KDM3BQ7LBC6 1761 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
LRRC49-227ENST00000561081 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.28
LRRC49-227ENST00000561081 SLC4A10Q6U841 1118 aa13.27□□□□□ -0.28
LRRC49-227ENST00000561081 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
LRRC49-227ENST00000561081 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
LRRC49-227ENST00000561081 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
LRRC49-227ENST00000561081 BECN1Q14457 450 aa13.26□□□□□ -0.29
LRRC49-227ENST00000561081 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
LRRC49-227ENST00000561081 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms