RNA–Protein interactions for RNA: ENST00000561068.5

RPS17-208, Transcript of ribosomal protein S17, humanhuman

TSL 3

Gene RPS17, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-208ENST00000561068 CAMK2BQ13554 666 aa6.93□□□□□ -1.3
RPS17-208ENST00000561068 NBPF1Q3BBV0 1214 aa6.93□□□□□ -1.3
RPS17-208ENST00000561068 LRRC59Q96AG4 307 aaKnown RBP6.93□□□□□ -1.3
RPS17-208ENST00000561068 TRAK1Q9UPV9 953 aa6.93□□□□□ -1.3
RPS17-208ENST00000561068 SPATA31A6Q5VVP1 1343 aa6.93□□□□□ -1.3
RPS17-208ENST00000561068 EP400Q96L91 3159 aa6.92□□□□□ -1.3
RPS17-208ENST00000561068 SMAPO00193 183 aa6.92□□□□□ -1.3
RPS17-208ENST00000561068 NBR1Q14596 966 aa6.92□□□□□ -1.3
RPS17-208ENST00000561068 ESCO1Q5FWF5 840 aa6.92□□□□□ -1.3
RPS17-208ENST00000561068 IFFO2Q5TF58 517 aa6.92□□□□□ -1.3
RPS17-208ENST00000561068 TRPM3Q9HCF6 1732 aaPredicted RBP6.92□□□□□ -1.3
RPS17-208ENST00000561068 PNPLA6Q8IY17 1366 aa6.92□□□□□ -1.3
RPS17-208ENST00000561068 ALS2Q96Q42 1657 aa6.91□□□□□ -1.3
RPS17-208ENST00000561068 ITSN1Q15811 1721 aa6.91□□□□□ -1.3
RPS17-208ENST00000561068 NUTM2FA1L443 756 aa6.91□□□□□ -1.3
RPS17-208ENST00000561068 TRIM6-TRIM34B2RNG4 842 aa6.91□□□□□ -1.3
RPS17-208ENST00000561068 FOXO3O43524 673 aa6.91□□□□□ -1.3
RPS17-208ENST00000561068 SAFB2Q14151 953 aaKnown RBP eCLIP6.91□□□□□ -1.3
RPS17-208ENST00000561068 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
RPS17-208ENST00000561068 TOPAZ1Q8N9V7 1692 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 QRICH2Q9H0J4 1663 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 C3orf80F5H4A9 247 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 SOCS7O14512 581 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 MAP3K7O43318 606 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 PRIM1P49642 420 aaKnown RBP6.9□□□□□ -1.3
RPS17-208ENST00000561068 NEUROD1Q13562 356 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 NBPF8Q3BBV2 869 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 EPAS1Q99814 870 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 POGKQ9P215 609 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 TSKSQ9UJT2 592 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 HPS5Q9UPZ3 1129 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 PRR36Q9H6K5 1346 aa6.9□□□□□ -1.3
RPS17-208ENST00000561068 TULP4Q9NRJ4 1543 aa6.9□□□□□ -1.31
RPS17-208ENST00000561068 ABCA3Q99758 1704 aa6.9□□□□□ -1.31
RPS17-208ENST00000561068 CRYBG1Q9Y4K1 1723 aa6.9□□□□□ -1.31
RPS17-208ENST00000561068 WASLO00401 505 aaPredicted RBP6.89□□□□□ -1.31
RPS17-208ENST00000561068 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
RPS17-208ENST00000561068 LAPTM4BQ86VI4 370 aa6.89□□□□□ -1.31
RPS17-208ENST00000561068 HIRIP3Q9BW71 556 aaPredicted RBP6.89□□□□□ -1.31
RPS17-208ENST00000561068 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
RPS17-208ENST00000561068 MINK1Q8N4C8 1332 aaPredicted RBP6.89□□□□□ -1.31
RPS17-208ENST00000561068 ANKARQ7Z5J8 1434 aa6.89□□□□□ -1.31
RPS17-208ENST00000561068 ATP7BP35670 1465 aa6.88□□□□□ -1.31
RPS17-208ENST00000561068 SPATA31A3Q5VYP0 1347 aa6.88□□□□□ -1.31
RPS17-208ENST00000561068 XPCQ01831 940 aaPredicted RBP6.88□□□□□ -1.31
RPS17-208ENST00000561068 FAM98CQ17RN3 349 aaKnown RBP6.88□□□□□ -1.31
RPS17-208ENST00000561068 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.88□□□□□ -1.31
RPS17-208ENST00000561068 FAM198AQ9UFP1 575 aa6.88□□□□□ -1.31
RPS17-208ENST00000561068 GPRASP1Q5JY77 1395 aa6.87□□□□□ -1.31
RPS17-208ENST00000561068 GRXCR2A6NFK2 248 aa6.87□□□□□ -1.31
RPS17-208ENST00000561068 NUTM2BA6NNL0 878 aaPredicted RBP6.87□□□□□ -1.31
RPS17-208ENST00000561068 NUTM2EB1AL46 878 aaPredicted RBP6.87□□□□□ -1.31
RPS17-208ENST00000561068 KRT28Q7Z3Y7 464 aa6.87□□□□□ -1.31
RPS17-208ENST00000561068 NUTM2AQ8IVF1 878 aaPredicted RBP6.87□□□□□ -1.31
RPS17-208ENST00000561068 PMFBP1Q8TBY8 1022 aa6.87□□□□□ -1.31
RPS17-208ENST00000561068 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
RPS17-208ENST00000561068 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.87□□□□□ -1.31
RPS17-208ENST00000561068 SBNO1A3KN83 1393 aa6.86□□□□□ -1.31
RPS17-208ENST00000561068 RGS20O76081 388 aa6.86□□□□□ -1.31
RPS17-208ENST00000561068 KCNC4Q03721 635 aa6.86□□□□□ -1.31
RPS17-208ENST00000561068 EN1Q05925 392 aaPredicted RBP6.86□□□□□ -1.31
RPS17-208ENST00000561068 FNBP4Q8N3X1 1017 aaPredicted RBP6.86□□□□□ -1.31
RPS17-208ENST00000561068 NUDT16Q96DE0 195 aaKnown RBP6.86□□□□□ -1.31
RPS17-208ENST00000561068 CDK19Q9BWU1 502 aa6.86□□□□□ -1.31
RPS17-208ENST00000561068 AKAP12Q02952 1782 aa6.85□□□□□ -1.31
RPS17-208ENST00000561068 POLR3AO14802 1390 aaPredicted RBP6.85□□□□□ -1.31
RPS17-208ENST00000561068 NWD2Q9ULI1 1742 aa6.85□□□□□ -1.31
RPS17-208ENST00000561068 AFF2P51816 1311 aa6.85□□□□□ -1.31
RPS17-208ENST00000561068 PLEKHG3A1L390 1219 aa6.85□□□□□ -1.31
RPS17-208ENST00000561068 Q6ZNB5 142 aa6.85□□□□□ -1.31
RPS17-208ENST00000561068 BBXQ8WY36 941 aaPredicted RBP6.85□□□□□ -1.31
RPS17-208ENST00000561068 TSR3Q9UJK0 312 aaKnown RBP6.85□□□□□ -1.31
RPS17-208ENST00000561068 BCL9LQ86UU0 1499 aa6.85□□□□□ -1.31
RPS17-208ENST00000561068 TNS3Q68CZ2 1445 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 EIF3AQ14152 1382 aaKnown RBP6.84□□□□□ -1.31
RPS17-208ENST00000561068 PLCH1Q4KWH8 1693 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 CENPJQ9HC77 1338 aaPredicted RBP6.84□□□□□ -1.31
RPS17-208ENST00000561068 PSME1Q06323 249 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 PDIA6Q15084 440 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 ZNF772Q68DY9 489 aaPredicted RBP6.84□□□□□ -1.31
RPS17-208ENST00000561068 SAMD7Q7Z3H4 446 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 PACS2Q86VP3 889 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 CDHR5Q9HBB8 845 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 RALGAPBQ86X10 1494 aa6.84□□□□□ -1.31
RPS17-208ENST00000561068 ROCK2O75116 1388 aaKnown RBP6.83□□□□□ -1.32
RPS17-208ENST00000561068 PHRF1Q9P1Y6 1649 aaKnown RBP6.83□□□□□ -1.32
RPS17-208ENST00000561068 BRWD3Q6RI45 1802 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 SLIT2O94813 1529 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
RPS17-208ENST00000561068 RNF40O75150 1001 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 ADAMTS2O95450 1211 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 MEX3CQ5U5Q3 659 aaKnown RBP6.83□□□□□ -1.32
RPS17-208ENST00000561068 CABLES1Q8TDN4 633 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 CDCA7LQ96GN5 454 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 C8orf37Q96NL8 207 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 QTRT2Q9H974 415 aaKnown RBP6.83□□□□□ -1.32
RPS17-208ENST00000561068 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
RPS17-208ENST00000561068 ACEP12821 1306 aa6.82□□□□□ -1.32
RPS17-208ENST00000561068 CDK12Q9NYV4 1490 aaPredicted RBP6.82□□□□□ -1.32
RPS17-208ENST00000561068 PPP4CP60510 307 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms