RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
SNX22-206ENST00000560997 PLEKHM2Q8IWE5 1019 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 DCTPP1Q9H773 170 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 MSH6P52701 1360 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 NALCNQ8IZF0 1738 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 FOXO3O43524 673 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
SNX22-206ENST00000560997 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 KIF24Q5T7B8 1368 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 RGPD1P0DJD0 1748 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 PTPRUQ92729 1446 aa12.19□□□□□ -0.46
SNX22-206ENST00000560997 RIMS1Q86UR5 1692 aaKnown RBP12.18□□□□□ -0.46
SNX22-206ENST00000560997 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
SNX22-206ENST00000560997 TRAK2O60296 914 aa12.18□□□□□ -0.46
SNX22-206ENST00000560997 CDC45O75419 566 aa12.18□□□□□ -0.46
SNX22-206ENST00000560997 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 CEBPAP49715 358 aaPredicted RBP12.17□□□□□ -0.46
SNX22-206ENST00000560997 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 MEIS3Q99687 375 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 CRB1P82279 1406 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 USP31Q70CQ4 1352 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 APBB1O00213 710 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 CEP85Q6P2H3 762 aa12.17□□□□□ -0.46
SNX22-206ENST00000560997 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
SNX22-206ENST00000560997 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
SNX22-206ENST00000560997 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
SNX22-206ENST00000560997 L1TD1Q5T7N2 865 aaKnown RBP12.16□□□□□ -0.46
SNX22-206ENST00000560997 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
SNX22-206ENST00000560997 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
SNX22-206ENST00000560997 TTC22Q5TAA0 569 aa12.16□□□□□ -0.46
SNX22-206ENST00000560997 SSH2Q76I76 1423 aa12.15□□□□□ -0.46
SNX22-206ENST00000560997 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
SNX22-206ENST00000560997 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
SNX22-206ENST00000560997 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
SNX22-206ENST00000560997 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNX22-206ENST00000560997 GOLGA6L3A6NEY3 463 aa12.15□□□□□ -0.47
SNX22-206ENST00000560997 K7ELQ4 463 aaPredicted RBP12.15□□□□□ -0.47
SNX22-206ENST00000560997 G2E3Q7L622 706 aa12.15□□□□□ -0.47
SNX22-206ENST00000560997 PTPRCP08575 1304 aa12.14□□□□□ -0.47
SNX22-206ENST00000560997 FMN2Q9NZ56 1722 aa12.14□□□□□ -0.47
SNX22-206ENST00000560997 F6X3S4 739 aa12.14□□□□□ -0.47
SNX22-206ENST00000560997 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
SNX22-206ENST00000560997 GAS2L2Q8NHY3 880 aa12.14□□□□□ -0.47
SNX22-206ENST00000560997 PANK2Q9BZ23 570 aa12.14□□□□□ -0.47
SNX22-206ENST00000560997 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
SNX22-206ENST00000560997 RGPD8O14715 1765 aaPredicted RBP12.14□□□□□ -0.47
SNX22-206ENST00000560997 ARHGEF10O15013 1369 aa12.13□□□□□ -0.47
SNX22-206ENST00000560997 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
SNX22-206ENST00000560997 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
SNX22-206ENST00000560997 RAB3GAP1Q15042 981 aa12.13□□□□□ -0.47
SNX22-206ENST00000560997 RPAP2Q8IXW5 612 aaPredicted RBP12.13□□□□□ -0.47
SNX22-206ENST00000560997 TSPYL4Q9UJ04 414 aa12.13□□□□□ -0.47
SNX22-206ENST00000560997 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
SNX22-206ENST00000560997 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
SNX22-206ENST00000560997 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
SNX22-206ENST00000560997 EYA1Q99502 592 aa12.12□□□□□ -0.47
SNX22-206ENST00000560997 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
SNX22-206ENST00000560997 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
SNX22-206ENST00000560997 FLT4P35916 1363 aa12.12□□□□□ -0.47
SNX22-206ENST00000560997 SDSP20132 328 aa12.12□□□□□ -0.47
SNX22-206ENST00000560997 NGDNQ8NEJ9 315 aaKnown RBP12.12□□□□□ -0.47
SNX22-206ENST00000560997 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
SNX22-206ENST00000560997 SBNO1A3KN83 1393 aa12.11□□□□□ -0.47
SNX22-206ENST00000560997 TTC21AQ8NDW8 1320 aa12.11□□□□□ -0.47
SNX22-206ENST00000560997 AMPHP49418 695 aa12.11□□□□□ -0.47
SNX22-206ENST00000560997 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 EID1Q9Y6B2 187 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 KDRP35968 1356 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 PIK3C2AO00443 1686 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 SSFA2P28290 1259 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 DIP2AQ14689 1571 aa12.1□□□□□ -0.47
SNX22-206ENST00000560997 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
SNX22-206ENST00000560997 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
SNX22-206ENST00000560997 RRAGDQ9NQL2 400 aaPredicted RBP12.09□□□□□ -0.47
SNX22-206ENST00000560997 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
SNX22-206ENST00000560997 RABEP1Q15276 862 aa12.08□□□□□ -0.48
SNX22-206ENST00000560997 NLRP6P59044 892 aa12.08□□□□□ -0.48
SNX22-206ENST00000560997 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
SNX22-206ENST00000560997 EXOC6BQ9Y2D4 811 aa12.07□□□□□ -0.48
SNX22-206ENST00000560997 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
SNX22-206ENST00000560997 TBX22Q9Y458 520 aa12.07□□□□□ -0.48
SNX22-206ENST00000560997 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 HMMRO75330 724 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 SLIT1O75093 1534 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 MRE11P49959 708 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 FLIIQ13045 1269 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 GAS2L3Q86XJ1 694 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 LRRC37A3O60309 1634 aa12.06□□□□□ -0.48
SNX22-206ENST00000560997 PDE1AP54750 535 aa12.05□□□□□ -0.48
SNX22-206ENST00000560997 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
SNX22-206ENST00000560997 STK31Q9BXU1 1019 aa12.05□□□□□ -0.48
SNX22-206ENST00000560997 FAM208AQ9UK61 1670 aaKnown RBP12.05□□□□□ -0.48
SNX22-206ENST00000560997 GNAI2P04899 355 aa12.05□□□□□ -0.48
SNX22-206ENST00000560997 HOXC9P31274 260 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms