RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
ZEB1-220ENST00000560909 ADAM23O75077 832 aa7.88□□□□□ -1.15
ZEB1-220ENST00000560909 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-220ENST00000560909 CDCA7LQ96GN5 454 aa7.88□□□□□ -1.15
ZEB1-220ENST00000560909 TONSLQ96HA7 1378 aa7.87□□□□□ -1.15
ZEB1-220ENST00000560909 BTBD11A6QL63 1104 aa7.87□□□□□ -1.15
ZEB1-220ENST00000560909 EMILIN3Q9NT22 766 aa7.87□□□□□ -1.15
ZEB1-220ENST00000560909 DNMT3AQ9Y6K1 912 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-220ENST00000560909 SLIT1O75093 1534 aa7.87□□□□□ -1.15
ZEB1-220ENST00000560909 MYOM2P54296 1465 aa7.87□□□□□ -1.15
ZEB1-220ENST00000560909 SMPD1P17405 629 aa7.86□□□□□ -1.15
ZEB1-220ENST00000560909 RGL3Q3MIN7 710 aa7.86□□□□□ -1.15
ZEB1-220ENST00000560909 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
ZEB1-220ENST00000560909 PRAG1Q86YV5 1406 aa7.86□□□□□ -1.15
ZEB1-220ENST00000560909 CFAP65Q6ZU64 1925 aaKnown RBP7.86□□□□□ -1.15
ZEB1-220ENST00000560909 NCKAP5LQ9HCH0 1330 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 NBPF8Q3BBV2 869 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 PRR14Q9BWN1 585 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 RIMS2Q9UQ26 1411 aa7.85□□□□□ -1.15
ZEB1-220ENST00000560909 CEP170BQ9Y4F5 1589 aaPredicted RBP7.84□□□□□ -1.15
ZEB1-220ENST00000560909 ADGRF5Q8IZF2 1346 aa7.84□□□□□ -1.15
ZEB1-220ENST00000560909 ZNF142P52746 1687 aaPredicted RBP7.84□□□□□ -1.15
ZEB1-220ENST00000560909 RGL2O15211 777 aa7.84□□□□□ -1.15
ZEB1-220ENST00000560909 PDE4AP27815 886 aa7.84□□□□□ -1.15
ZEB1-220ENST00000560909 LTKP29376 864 aa7.84□□□□□ -1.15
ZEB1-220ENST00000560909 TSR1Q2NL82 804 aaKnown RBP7.84□□□□□ -1.15
ZEB1-220ENST00000560909 KRTAP4-12Q9BQ66 201 aa7.84□□□□□ -1.15
ZEB1-220ENST00000560909 C14orf93Q9H972 538 aaKnown RBP7.84□□□□□ -1.15
ZEB1-220ENST00000560909 MYO3AQ8NEV4 1616 aa7.84□□□□□ -1.15
ZEB1-220ENST00000560909 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.16
ZEB1-220ENST00000560909 UBR1Q8IWV7 1749 aa7.83□□□□□ -1.16
ZEB1-220ENST00000560909 MED14O60244 1454 aa7.83□□□□□ -1.16
ZEB1-220ENST00000560909 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
ZEB1-220ENST00000560909 PRSS12P56730 875 aa7.83□□□□□ -1.16
ZEB1-220ENST00000560909 SWT1Q5T5J6 900 aaKnown RBP7.83□□□□□ -1.16
ZEB1-220ENST00000560909 PIK3C2GO75747 1445 aa7.83□□□□□ -1.16
ZEB1-220ENST00000560909 PLEKHG1Q9ULL1 1385 aa7.83□□□□□ -1.16
ZEB1-220ENST00000560909 KIF1BO60333 1816 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 LMTK3Q96Q04 1460 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 ADH1BP00325 375 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 RPIAP49247 311 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 ZNF326Q5BKZ1 582 aaKnown RBP7.82□□□□□ -1.16
ZEB1-220ENST00000560909 TXNDC2Q86VQ3 553 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 Q8N3U1 123 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 SLC6A16Q9GZN6 736 aa7.82□□□□□ -1.16
ZEB1-220ENST00000560909 IFT172Q9UG01 1749 aa7.81□□□□□ -1.16
ZEB1-220ENST00000560909 CD2BP2O95400 341 aaKnown RBP7.81□□□□□ -1.16
ZEB1-220ENST00000560909 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
ZEB1-220ENST00000560909 KDM2AQ9Y2K7 1162 aa7.81□□□□□ -1.16
ZEB1-220ENST00000560909 TBX22Q9Y458 520 aa7.81□□□□□ -1.16
ZEB1-220ENST00000560909 RALGAPBQ86X10 1494 aa7.81□□□□□ -1.16
ZEB1-220ENST00000560909 SCAF11Q99590 1463 aaKnown RBP7.81□□□□□ -1.16
ZEB1-220ENST00000560909 ADAMTS13Q76LX8 1427 aa7.8□□□□□ -1.16
ZEB1-220ENST00000560909 PPLO60437 1756 aa7.8□□□□□ -1.16
ZEB1-220ENST00000560909 FOXK2Q01167 660 aa7.8□□□□□ -1.16
ZEB1-220ENST00000560909 NUDT18Q6ZVK8 323 aa7.8□□□□□ -1.16
ZEB1-220ENST00000560909 EID1Q9Y6B2 187 aa7.8□□□□□ -1.16
ZEB1-220ENST00000560909 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
ZEB1-220ENST00000560909 MAP3K7O43318 606 aa7.79□□□□□ -1.16
ZEB1-220ENST00000560909 NBPF1Q3BBV0 1214 aa7.79□□□□□ -1.16
ZEB1-220ENST00000560909 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
ZEB1-220ENST00000560909 SIRT1Q96EB6 747 aa7.79□□□□□ -1.16
ZEB1-220ENST00000560909 DDX27Q96GQ7 796 aaKnown RBP7.78□□□□□ -1.16
ZEB1-220ENST00000560909 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
ZEB1-220ENST00000560909 PIK3R4Q99570 1358 aa7.78□□□□□ -1.16
ZEB1-220ENST00000560909 ADGRB1O14514 1584 aa7.78□□□□□ -1.16
ZEB1-220ENST00000560909 MYO5BQ9ULV0 1848 aa7.78□□□□□ -1.16
ZEB1-220ENST00000560909 KIAA1210Q9ULL0 1709 aa7.78□□□□□ -1.16
ZEB1-220ENST00000560909 ABCC11Q96J66 1382 aa7.77□□□□□ -1.17
ZEB1-220ENST00000560909 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
ZEB1-220ENST00000560909 NUTM2DQ5VT03 806 aaPredicted RBP7.77□□□□□ -1.17
ZEB1-220ENST00000560909 ALKQ9UM73 1620 aa7.77□□□□□ -1.17
ZEB1-220ENST00000560909 NRXN3Q9Y4C0 1643 aa7.77□□□□□ -1.17
ZEB1-220ENST00000560909 NPHP4O75161 1426 aaPredicted RBP7.77□□□□□ -1.17
ZEB1-220ENST00000560909 LRPPRCP42704 1394 aaKnown RBP7.76□□□□□ -1.17
ZEB1-220ENST00000560909 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
ZEB1-220ENST00000560909 HSPA2P54652 639 aa7.76□□□□□ -1.17
ZEB1-220ENST00000560909 SNIP1Q8TAD8 396 aaKnown RBP7.76□□□□□ -1.17
ZEB1-220ENST00000560909 DDX12PQ92771 950 aa7.76□□□□□ -1.17
ZEB1-220ENST00000560909 HPS1Q92902 700 aa7.76□□□□□ -1.17
ZEB1-220ENST00000560909 LARP6Q9BRS8 491 aaKnown RBP7.76□□□□□ -1.17
ZEB1-220ENST00000560909 TECPR2O15040 1411 aa7.76□□□□□ -1.17
ZEB1-220ENST00000560909 ROCK2O75116 1388 aaKnown RBP7.75□□□□□ -1.17
ZEB1-220ENST00000560909 METP08581 1390 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 LAMC1P11047 1609 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 TRPM1Q7Z4N2 1603 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 J3QL48 77 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 HS6ST3Q8IZP7 471 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 DIP2AQ14689 1571 aa7.75□□□□□ -1.17
ZEB1-220ENST00000560909 IRS1P35568 1242 aa7.74□□□□□ -1.17
ZEB1-220ENST00000560909 CARD11Q9BXL7 1154 aa7.74□□□□□ -1.17
ZEB1-220ENST00000560909 PTPRUQ92729 1446 aa7.74□□□□□ -1.17
ZEB1-220ENST00000560909 YTHDC2Q9H6S0 1430 aaKnown RBP7.74□□□□□ -1.17
ZEB1-220ENST00000560909 SETD1AO15047 1707 aaKnown RBP7.74□□□□□ -1.17
ZEB1-220ENST00000560909 SBNO2Q9Y2G9 1366 aa7.73□□□□□ -1.17
ZEB1-220ENST00000560909 FAM135BQ49AJ0 1406 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms