RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
ETFA-218ENST00000560899 TATP17735 454 aaPredicted RBP23.45■■□□□ 1.34
ETFA-218ENST00000560899 ZCRB1Q8TBF4 217 aaKnown RBP23.45■■□□□ 1.34
ETFA-218ENST00000560899 EYA1Q99502 592 aa23.45■■□□□ 1.34
ETFA-218ENST00000560899 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
ETFA-218ENST00000560899 DOT1LQ8TEK3 1739 aa23.45■■□□□ 1.34
ETFA-218ENST00000560899 APBA3O96018 575 aa23.44■■□□□ 1.34
ETFA-218ENST00000560899 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
ETFA-218ENST00000560899 CAMKK2Q96RR4 588 aa23.44■■□□□ 1.34
ETFA-218ENST00000560899 BTAF1O14981 1849 aa23.43■■□□□ 1.34
ETFA-218ENST00000560899 EN1Q05925 392 aaPredicted RBP23.43■■□□□ 1.34
ETFA-218ENST00000560899 PCDH11XQ9BZA7 1347 aa23.42■■□□□ 1.34
ETFA-218ENST00000560899 PCDH11YQ9BZA8 1340 aa23.42■■□□□ 1.34
ETFA-218ENST00000560899 PLSCR1O15162 318 aa23.42■■□□□ 1.34
ETFA-218ENST00000560899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.41■■□□□ 1.342e-7■□□□□ 10
ETFA-218ENST00000560899 KDRP35968 1356 aa23.4■■□□□ 1.34
ETFA-218ENST00000560899 MTHFSP49914 203 aa23.39■■□□□ 1.33
ETFA-218ENST00000560899 DDX54Q8TDD1 881 aaKnown RBP23.39■■□□□ 1.33
ETFA-218ENST00000560899 KAT6BQ8WYB5 2073 aa23.39■■□□□ 1.33
ETFA-218ENST00000560899 COL3A1P02461 1466 aaPredicted RBP23.38■■□□□ 1.33
ETFA-218ENST00000560899 EZH2Q15910 746 aaKnown RBP23.38■■□□□ 1.33
ETFA-218ENST00000560899 IL13P35225 146 aa23.37■■□□□ 1.33
ETFA-218ENST00000560899 PTF1AQ7RTS3 328 aa23.36■■□□□ 1.33
ETFA-218ENST00000560899 SPG7Q9UQ90 795 aa23.35■■□□□ 1.33
ETFA-218ENST00000560899 TOGARAM1Q9Y4F4 1720 aa23.35■■□□□ 1.33
ETFA-218ENST00000560899 KCNQ2O43526 872 aa23.34■■□□□ 1.33
ETFA-218ENST00000560899 CYP27B1O15528 508 aa23.33■■□□□ 1.33
ETFA-218ENST00000560899 ITGB4P16144 1822 aa23.32■■□□□ 1.32
ETFA-218ENST00000560899 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
ETFA-218ENST00000560899 ACSBG1Q96GR2 724 aa23.32■■□□□ 1.32
ETFA-218ENST00000560899 LY75O60449 1722 aa23.31■■□□□ 1.32
ETFA-218ENST00000560899 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
ETFA-218ENST00000560899 PAPPAQ13219 1627 aa23.29■■□□□ 1.32
ETFA-218ENST00000560899 PRIM1P49642 420 aaKnown RBP23.27■■□□□ 1.32
ETFA-218ENST00000560899 AMOTQ4VCS5 1084 aa23.27■■□□□ 1.32
ETFA-218ENST00000560899 SULT6B1Q6IMI4 303 aa23.27■■□□□ 1.32
ETFA-218ENST00000560899 AEBP1Q8IUX7 1158 aa23.27■■□□□ 1.32
ETFA-218ENST00000560899 PHKG2P15735 406 aa23.26■■□□□ 1.31
ETFA-218ENST00000560899 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
ETFA-218ENST00000560899 IFNL2Q8IZJ0 200 aa23.26■■□□□ 1.31
ETFA-218ENST00000560899 PROM2Q8N271 834 aa23.26■■□□□ 1.31
ETFA-218ENST00000560899 TXNRD1Q16881 649 aa23.25■■□□□ 1.31
ETFA-218ENST00000560899 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
ETFA-218ENST00000560899 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
ETFA-218ENST00000560899 LRP5O75197 1615 aa23.24■■□□□ 1.31
ETFA-218ENST00000560899 NBPF14Q5TI25 921 aa23.24■■□□□ 1.31
ETFA-218ENST00000560899 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
ETFA-218ENST00000560899 HSP90AB1P08238 724 aaKnown RBP23.22■■□□□ 1.31
ETFA-218ENST00000560899 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
ETFA-218ENST00000560899 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
ETFA-218ENST00000560899 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
ETFA-218ENST00000560899 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
ETFA-218ENST00000560899 VIRMAQ69YN4 1812 aaKnown RBP23.19■■□□□ 1.3
ETFA-218ENST00000560899 QSER1Q2KHR3 1735 aa23.19■■□□□ 1.3
ETFA-218ENST00000560899 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
ETFA-218ENST00000560899 R3HDM1Q15032 1099 aaKnown RBP23.19■■□□□ 1.3
ETFA-218ENST00000560899 ZNF530Q6P9A1 599 aaPredicted RBP23.19■■□□□ 1.3
ETFA-218ENST00000560899 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
ETFA-218ENST00000560899 KDM6AO15550 1401 aaPredicted RBP23.18■■□□□ 1.3
ETFA-218ENST00000560899 RALBP1Q15311 655 aa23.18■■□□□ 1.3
ETFA-218ENST00000560899 CASZ1Q86V15 1759 aa23.18■■□□□ 1.3
ETFA-218ENST00000560899 SRCAPQ6ZRS2 3230 aa23.17■■□□□ 1.3
ETFA-218ENST00000560899 ANO8Q9HCE9 1232 aaPredicted RBP23.17■■□□□ 1.3
ETFA-218ENST00000560899 PSDA5PKW4 1024 aaPredicted RBP23.16■■□□□ 1.3
ETFA-218ENST00000560899 ERVV-2B6SEH9 535 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 HMOX1P09601 288 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 NUDCQ9Y266 331 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 C5P01031 1676 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 ZNF831Q5JPB2 1677 aa23.16■■□□□ 1.3
ETFA-218ENST00000560899 HMGB2P26583 209 aaKnown RBP23.15■■□□□ 1.3
ETFA-218ENST00000560899 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
ETFA-218ENST00000560899 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
ETFA-218ENST00000560899 MRC1P22897 1456 aa23.14■■□□□ 1.29
ETFA-218ENST00000560899 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
ETFA-218ENST00000560899 MPRIPQ6WCQ1 1025 aa23.14■■□□□ 1.29
ETFA-218ENST00000560899 LRRC4BQ9NT99 713 aa23.14■■□□□ 1.29
ETFA-218ENST00000560899 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
ETFA-218ENST00000560899 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
ETFA-218ENST00000560899 PIGBQ92521 554 aa23.13■■□□□ 1.29
ETFA-218ENST00000560899 STK32BQ9NY57 414 aa23.12■■□□□ 1.29
ETFA-218ENST00000560899 TUBGCP6Q96RT7 1819 aa23.11■■□□□ 1.29
ETFA-218ENST00000560899 SLC15A2Q16348 729 aa23.11■■□□□ 1.29
ETFA-218ENST00000560899 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
ETFA-218ENST00000560899 CICQ96RK0 1608 aaPredicted RBP23.09■■□□□ 1.29
ETFA-218ENST00000560899 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
ETFA-218ENST00000560899 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.29
ETFA-218ENST00000560899 FCHSD2O94868 740 aa23.08■■□□□ 1.29
ETFA-218ENST00000560899 MTHFSDQ2M296 383 aaKnown RBP23.08■■□□□ 1.29
ETFA-218ENST00000560899 GAS2L2Q8NHY3 880 aa23.07■■□□□ 1.28
ETFA-218ENST00000560899 AKT1S1Q96B36 256 aa23.07■■□□□ 1.28
ETFA-218ENST00000560899 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
ETFA-218ENST00000560899 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
ETFA-218ENST00000560899 C4BP0C0L5 1744 aa23.05■■□□□ 1.28
ETFA-218ENST00000560899 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
ETFA-218ENST00000560899 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
ETFA-218ENST00000560899 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
ETFA-218ENST00000560899 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
ETFA-218ENST00000560899 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms