RNA–Protein interactions for RNA: ENST00000560663.5

MIR9-3HG-210, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-210ENST00000560663 RAPGEF4Q8WZA2 1011 aa22.96■■□□□ 1.27
MIR9-3HG-210ENST00000560663 DDX54Q8TDD1 881 aaKnown RBP22.94■■□□□ 1.26
MIR9-3HG-210ENST00000560663 KDRP35968 1356 aa22.92■■□□□ 1.26
MIR9-3HG-210ENST00000560663 RGPD1P0DJD0 1748 aa22.92■■□□□ 1.26
MIR9-3HG-210ENST00000560663 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
MIR9-3HG-210ENST00000560663 KCNQ2O43526 872 aa22.92■■□□□ 1.26
MIR9-3HG-210ENST00000560663 CYP27B1O15528 508 aa22.91■■□□□ 1.26
MIR9-3HG-210ENST00000560663 DIAPH1O60610 1272 aaKnown RBP22.91■■□□□ 1.26
MIR9-3HG-210ENST00000560663 SULT6B1Q6IMI4 303 aa22.9■■□□□ 1.26
MIR9-3HG-210ENST00000560663 TNS1Q9HBL0 1735 aaKnown RBP22.9■■□□□ 1.26
MIR9-3HG-210ENST00000560663 ACSBG1Q96GR2 724 aa22.89■■□□□ 1.25
MIR9-3HG-210ENST00000560663 BCL11BQ9C0K0 894 aaPredicted RBP22.89■■□□□ 1.25
MIR9-3HG-210ENST00000560663 EN1Q05925 392 aaPredicted RBP22.88■■□□□ 1.25
MIR9-3HG-210ENST00000560663 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
MIR9-3HG-210ENST00000560663 CAMKK2Q96RR4 588 aa22.88■■□□□ 1.25
MIR9-3HG-210ENST00000560663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.88■■□□□ 1.25
MIR9-3HG-210ENST00000560663 APBA3O96018 575 aa22.87■■□□□ 1.25
MIR9-3HG-210ENST00000560663 PCDH11XQ9BZA7 1347 aa22.86■■□□□ 1.25
MIR9-3HG-210ENST00000560663 PCDH11YQ9BZA8 1340 aa22.86■■□□□ 1.25
MIR9-3HG-210ENST00000560663 BAG6P46379 1132 aa22.86■■□□□ 1.25
MIR9-3HG-210ENST00000560663 PLEKHG2Q9H7P9 1386 aa22.86■■□□□ 1.25
MIR9-3HG-210ENST00000560663 PKD1L3Q7Z443 1732 aa22.85■■□□□ 1.25
MIR9-3HG-210ENST00000560663 HMOX1P09601 288 aa22.85■■□□□ 1.25
MIR9-3HG-210ENST00000560663 RALBP1Q15311 655 aa22.85■■□□□ 1.25
MIR9-3HG-210ENST00000560663 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
MIR9-3HG-210ENST00000560663 SBF2Q86WG5 1849 aa22.84■■□□□ 1.25
MIR9-3HG-210ENST00000560663 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
MIR9-3HG-210ENST00000560663 SPG7Q9UQ90 795 aa22.83■■□□□ 1.25
MIR9-3HG-210ENST00000560663 PHKG2P15735 406 aa22.82■■□□□ 1.24
MIR9-3HG-210ENST00000560663 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
MIR9-3HG-210ENST00000560663 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
MIR9-3HG-210ENST00000560663 NHSQ6T4R5 1651 aa22.81■■□□□ 1.24
MIR9-3HG-210ENST00000560663 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
MIR9-3HG-210ENST00000560663 PLSCR1O15162 318 aa22.8■■□□□ 1.24
MIR9-3HG-210ENST00000560663 PROM2Q8N271 834 aa22.8■■□□□ 1.24
MIR9-3HG-210ENST00000560663 PRKRIP1Q9H875 184 aaPredicted RBP22.8■■□□□ 1.24
MIR9-3HG-210ENST00000560663 PLEKHO1Q53GL0 409 aaPredicted RBP22.79■■□□□ 1.24
MIR9-3HG-210ENST00000560663 AMOTQ4VCS5 1084 aa22.78■■□□□ 1.24
MIR9-3HG-210ENST00000560663 IFNL2Q8IZJ0 200 aa22.78■■□□□ 1.24
MIR9-3HG-210ENST00000560663 RSPH6AQ9H0K4 717 aa22.77■■□□□ 1.24
MIR9-3HG-210ENST00000560663 MYBBP1AQ9BQG0 1328 aaKnown RBP22.77■■□□□ 1.24
MIR9-3HG-210ENST00000560663 ZNF530Q6P9A1 599 aaPredicted RBP22.76■■□□□ 1.23
MIR9-3HG-210ENST00000560663 MTHFSDQ2M296 383 aaKnown RBP22.75■■□□□ 1.23
MIR9-3HG-210ENST00000560663 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
MIR9-3HG-210ENST00000560663 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
MIR9-3HG-210ENST00000560663 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
MIR9-3HG-210ENST00000560663 DOT1LQ8TEK3 1739 aa22.74■■□□□ 1.23
MIR9-3HG-210ENST00000560663 PHACTR3Q96KR7 559 aa22.73■■□□□ 1.23
MIR9-3HG-210ENST00000560663 NUDCQ9Y266 331 aa22.73■■□□□ 1.23
MIR9-3HG-210ENST00000560663 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
MIR9-3HG-210ENST00000560663 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
MIR9-3HG-210ENST00000560663 PRKAR2BP31323 418 aa22.71■■□□□ 1.23
MIR9-3HG-210ENST00000560663 TXNRD1Q16881 649 aa22.71■■□□□ 1.23
MIR9-3HG-210ENST00000560663 PIGBQ92521 554 aa22.71■■□□□ 1.23
MIR9-3HG-210ENST00000560663 RREB1Q92766 1687 aa22.7■■□□□ 1.22
MIR9-3HG-210ENST00000560663 BTAF1O14981 1849 aa22.7■■□□□ 1.22
MIR9-3HG-210ENST00000560663 MPRIPQ6WCQ1 1025 aa22.69■■□□□ 1.22
MIR9-3HG-210ENST00000560663 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
MIR9-3HG-210ENST00000560663 FCHSD2O94868 740 aa22.68■■□□□ 1.22
MIR9-3HG-210ENST00000560663 AKAP4Q5JQC9 854 aa22.68■■□□□ 1.22
MIR9-3HG-210ENST00000560663 LRRC4BQ9NT99 713 aa22.68■■□□□ 1.22
MIR9-3HG-210ENST00000560663 RGPD3A6NKT7 1758 aaPredicted RBP22.68■■□□□ 1.22
MIR9-3HG-210ENST00000560663 RGPD4Q7Z3J3 1758 aa22.68■■□□□ 1.22
MIR9-3HG-210ENST00000560663 HSP90AB1P08238 724 aaKnown RBP22.67■■□□□ 1.22
MIR9-3HG-210ENST00000560663 ANO8Q9HCE9 1232 aaPredicted RBP22.67■■□□□ 1.22
MIR9-3HG-210ENST00000560663 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
MIR9-3HG-210ENST00000560663 ERVV-2B6SEH9 535 aa22.66■■□□□ 1.22
MIR9-3HG-210ENST00000560663 C1orf141Q5JVX7 400 aa22.66■■□□□ 1.22
MIR9-3HG-210ENST00000560663 PLEKHF1Q96S99 279 aa22.66■■□□□ 1.22
MIR9-3HG-210ENST00000560663 LGR6Q9HBX8 967 aa22.66■■□□□ 1.22
MIR9-3HG-210ENST00000560663 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
MIR9-3HG-210ENST00000560663 KCNQ4P56696 695 aa22.64■■□□□ 1.21
MIR9-3HG-210ENST00000560663 CCDC184Q52MB2 194 aa22.64■■□□□ 1.21
MIR9-3HG-210ENST00000560663 TMOD3Q9NYL9 352 aa22.63■■□□□ 1.21
MIR9-3HG-210ENST00000560663 ASAP1Q9ULH1 1129 aa22.63■■□□□ 1.21
MIR9-3HG-210ENST00000560663 PSDA5PKW4 1024 aaPredicted RBP22.62■■□□□ 1.21
MIR9-3HG-210ENST00000560663 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
MIR9-3HG-210ENST00000560663 GAS2L2Q8NHY3 880 aa22.62■■□□□ 1.21
MIR9-3HG-210ENST00000560663 PALLDQ8WX93 1383 aa22.62■■□□□ 1.21
MIR9-3HG-210ENST00000560663 KAT6BQ8WYB5 2073 aa22.61■■□□□ 1.21
MIR9-3HG-210ENST00000560663 R3HDM1Q15032 1099 aaKnown RBP22.61■■□□□ 1.21
MIR9-3HG-210ENST00000560663 IL17REQ8NFR9 667 aa22.61■■□□□ 1.21
MIR9-3HG-210ENST00000560663 ATG3Q9NT62 314 aa22.61■■□□□ 1.21
MIR9-3HG-210ENST00000560663 MAP3K5Q99683 1374 aa22.6■■□□□ 1.21
MIR9-3HG-210ENST00000560663 ITGB4P16144 1822 aa22.59■■□□□ 1.21
MIR9-3HG-210ENST00000560663 ADAMTS7Q9UKP4 1686 aa22.59■■□□□ 1.21
MIR9-3HG-210ENST00000560663 CABP4P57796 275 aa22.59■■□□□ 1.21
MIR9-3HG-210ENST00000560663 SLC27A3Q5K4L6 730 aa22.59■■□□□ 1.21
MIR9-3HG-210ENST00000560663 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
MIR9-3HG-210ENST00000560663 PAPPAQ13219 1627 aa22.59■■□□□ 1.21
MIR9-3HG-210ENST00000560663 ZNF827Q17R98 1081 aa22.58■■□□□ 1.21
MIR9-3HG-210ENST00000560663 MRC1P22897 1456 aa22.58■■□□□ 1.2
MIR9-3HG-210ENST00000560663 GNAT3A8MTJ3 354 aa22.57■■□□□ 1.2
MIR9-3HG-210ENST00000560663 SLC4A9Q96Q91 983 aa22.57■■□□□ 1.2
MIR9-3HG-210ENST00000560663 SLC52A2Q9HAB3 445 aa22.57■■□□□ 1.2
MIR9-3HG-210ENST00000560663 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
MIR9-3HG-210ENST00000560663 LY75O60449 1722 aa22.57■■□□□ 1.2
MIR9-3HG-210ENST00000560663 NBPF14Q5TI25 921 aa22.56■■□□□ 1.2
MIR9-3HG-210ENST00000560663 SMARCC1Q92922 1105 aaPredicted RBP22.56■■□□□ 1.2
MIR9-3HG-210ENST00000560663 AKT1S1Q96B36 256 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms