RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 SSH2Q76I76 1423 aa21.95■■□□□ 1.1
TRPM1-211ENST00000560658 ACEP12821 1306 aa21.95■■□□□ 1.1
TRPM1-211ENST00000560658 RAB3GAP1Q15042 981 aa21.95■■□□□ 1.1
TRPM1-211ENST00000560658 RABEP1Q15276 862 aa21.95■■□□□ 1.1
TRPM1-211ENST00000560658 RGS12O14924 1447 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 ELL2O00472 640 aaPredicted RBP21.94■■□□□ 1.1
TRPM1-211ENST00000560658 HTATSF1O43719 755 aaKnown RBP21.94■■□□□ 1.1
TRPM1-211ENST00000560658 HMMRO75330 724 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 MRE11P49959 708 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 TTC22Q5TAA0 569 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 PLEKHM2Q8IWE5 1019 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 KIF2CQ99661 725 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
TRPM1-211ENST00000560658 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
TRPM1-211ENST00000560658 CRB1P82279 1406 aa21.92■■□□□ 1.1
TRPM1-211ENST00000560658 CLEC17AQ6ZS10 378 aa21.92■■□□□ 1.1
TRPM1-211ENST00000560658 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
TRPM1-211ENST00000560658 SPRYD3Q8NCJ5 442 aa21.91■■□□□ 1.1
TRPM1-211ENST00000560658 SBNO1A3KN83 1393 aa21.91■■□□□ 1.1
TRPM1-211ENST00000560658 RTL1A6NKG5 1358 aa21.91■■□□□ 1.1
TRPM1-211ENST00000560658 FAM83GA6ND36 823 aa21.91■■□□□ 1.1
TRPM1-211ENST00000560658 CCT4P50991 539 aaKnown RBP21.91■■□□□ 1.1
TRPM1-211ENST00000560658 PTPRUQ92729 1446 aa21.9■■□□□ 1.1
TRPM1-211ENST00000560658 DIP2AQ14689 1571 aa21.9■■□□□ 1.1
TRPM1-211ENST00000560658 FLT4P35916 1363 aa21.9■■□□□ 1.1
TRPM1-211ENST00000560658 KDRP35968 1356 aa21.9■■□□□ 1.1
TRPM1-211ENST00000560658 HSP90AA1P07900 732 aaKnown RBP21.9■■□□□ 1.1
TRPM1-211ENST00000560658 RTN4Q9NQC3 1192 aaKnown RBP21.9■■□□□ 1.1
TRPM1-211ENST00000560658 GOLGA6L22H0YM25 854 aa21.89■■□□□ 1.09
TRPM1-211ENST00000560658 CEP85Q6P2H3 762 aa21.89■■□□□ 1.09
TRPM1-211ENST00000560658 GAS2L2Q8NHY3 880 aa21.89■■□□□ 1.09
TRPM1-211ENST00000560658 BABAM1Q9NWV8 329 aa21.88■■□□□ 1.09
TRPM1-211ENST00000560658 EID1Q9Y6B2 187 aa21.88■■□□□ 1.09
TRPM1-211ENST00000560658 SLIT1O75093 1534 aa21.88■■□□□ 1.09
TRPM1-211ENST00000560658 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
TRPM1-211ENST00000560658 RTF1Q92541 710 aaKnown RBP21.88■■□□□ 1.09
TRPM1-211ENST00000560658 TNPO1Q92973 898 aaKnown RBP21.88■■□□□ 1.09
TRPM1-211ENST00000560658 NCKAP5LQ9HCH0 1330 aa21.87■■□□□ 1.09
TRPM1-211ENST00000560658 PEAK1Q9H792 1746 aa21.87■■□□□ 1.09
TRPM1-211ENST00000560658 GSPT1P15170 499 aaKnown RBP21.87■■□□□ 1.09
TRPM1-211ENST00000560658 DCTN1Q14203 1278 aa21.87■■□□□ 1.09
TRPM1-211ENST00000560658 AEBP1Q8IUX7 1158 aa21.87■■□□□ 1.09
TRPM1-211ENST00000560658 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
TRPM1-211ENST00000560658 ARHGAP23Q9P227 1491 aa21.86■■□□□ 1.09
TRPM1-211ENST00000560658 REC8O95072 547 aa21.85■■□□□ 1.09
TRPM1-211ENST00000560658 OSBPL3Q9H4L5 887 aa21.85■■□□□ 1.09
TRPM1-211ENST00000560658 FMN2Q9NZ56 1722 aa21.85■■□□□ 1.09
TRPM1-211ENST00000560658 XRCC6P12956 609 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRPM1-211ENST00000560658 NUCB2P80303 420 aa21.84■■□□□ 1.09
TRPM1-211ENST00000560658 CWC22Q9HCG8 908 aaKnown RBP21.84■■□□□ 1.09
TRPM1-211ENST00000560658 MSH6P52701 1360 aa21.84■■□□□ 1.09
TRPM1-211ENST00000560658 ANKARQ7Z5J8 1434 aa21.84■■□□□ 1.09
TRPM1-211ENST00000560658 USP26Q9BXU7 913 aa21.83■■□□□ 1.08
TRPM1-211ENST00000560658 IGSF1Q8N6C5 1336 aa21.83■■□□□ 1.08
TRPM1-211ENST00000560658 HSP90AB2PQ58FF8 381 aa21.82■■□□□ 1.08
TRPM1-211ENST00000560658 IBTKQ9P2D0 1353 aaPredicted RBP21.82■■□□□ 1.08
TRPM1-211ENST00000560658 MCM10Q7L590 875 aa21.81■■□□□ 1.08
TRPM1-211ENST00000560658 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
TRPM1-211ENST00000560658 USP54Q70EL1 1684 aa21.81■■□□□ 1.08
TRPM1-211ENST00000560658 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 ST18O60284 1047 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 TSPYL4Q9UJ04 414 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 SLC4A2P04920 1241 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 GNAI3P08754 354 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 STK31Q9BXU1 1019 aa21.8■■□□□ 1.08
TRPM1-211ENST00000560658 GRPEL1Q9HAV7 217 aa21.79■■□□□ 1.08
TRPM1-211ENST00000560658 PXDNLA1KZ92 1463 aa21.78■■□□□ 1.08
TRPM1-211ENST00000560658 EPB41L2O43491 1005 aaKnown RBP21.78■■□□□ 1.08
TRPM1-211ENST00000560658 GNAI2P04899 355 aa21.78■■□□□ 1.08
TRPM1-211ENST00000560658 SDSP20132 328 aa21.77■■□□□ 1.08
TRPM1-211ENST00000560658 LTKP29376 864 aa21.77■■□□□ 1.08
TRPM1-211ENST00000560658 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
TRPM1-211ENST00000560658 ERC2O15083 957 aa21.77■■□□□ 1.07
TRPM1-211ENST00000560658 MCM2P49736 904 aa21.77■■□□□ 1.07
TRPM1-211ENST00000560658 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.07
TRPM1-211ENST00000560658 MEIS3Q99687 375 aa21.77■■□□□ 1.07
TRPM1-211ENST00000560658 AMPHP49418 695 aa21.76■■□□□ 1.07
TRPM1-211ENST00000560658 GZF1Q9H116 711 aaPredicted RBP21.76■■□□□ 1.07
TRPM1-211ENST00000560658 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
TRPM1-211ENST00000560658 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
TRPM1-211ENST00000560658 CD2BP2O95400 341 aaKnown RBP21.74■■□□□ 1.07
TRPM1-211ENST00000560658 KLHL40Q2TBA0 621 aa21.74■■□□□ 1.07
TRPM1-211ENST00000560658 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
TRPM1-211ENST00000560658 AOX1Q06278 1338 aa21.74■■□□□ 1.07
TRPM1-211ENST00000560658 N4BP2Q86UW6 1770 aaPredicted RBP21.73■■□□□ 1.07
TRPM1-211ENST00000560658 KRT24Q2M2I5 525 aa21.73■■□□□ 1.07
TRPM1-211ENST00000560658 GNAT3A8MTJ3 354 aa21.72■■□□□ 1.07
TRPM1-211ENST00000560658 MCCP23508 829 aa21.72■■□□□ 1.07
TRPM1-211ENST00000560658 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
TRPM1-211ENST00000560658 XRN1Q8IZH2 1706 aaKnown RBP21.71■■□□□ 1.07
TRPM1-211ENST00000560658 PDE1AP54750 535 aa21.71■■□□□ 1.07
TRPM1-211ENST00000560658 C16orf71Q8IYS4 520 aaPredicted RBP21.71■■□□□ 1.07
TRPM1-211ENST00000560658 EYA1Q99502 592 aa21.71■■□□□ 1.07
TRPM1-211ENST00000560658 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
TRPM1-211ENST00000560658 CACNA1FO60840 1977 aa21.7■■□□□ 1.07
TRPM1-211ENST00000560658 PIK3C2AO00443 1686 aa21.7■■□□□ 1.06
TRPM1-211ENST00000560658 BAG4O95429 457 aaKnown RBP21.7■■□□□ 1.06
TRPM1-211ENST00000560658 CYP2E1P05181 493 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms