RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
RMDN3-209ENST00000560588 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
RMDN3-209ENST00000560588 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
RMDN3-209ENST00000560588 RPAP2Q8IXW5 612 aaPredicted RBP12.92□□□□□ -0.34
RMDN3-209ENST00000560588 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
RMDN3-209ENST00000560588 CHD2O14647 1828 aaKnown RBP12.92□□□□□ -0.34
RMDN3-209ENST00000560588 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
RMDN3-209ENST00000560588 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
RMDN3-209ENST00000560588 RGS12O14924 1447 aa12.91□□□□□ -0.34
RMDN3-209ENST00000560588 RBM25P49756 843 aaKnown RBP12.9□□□□□ -0.34
RMDN3-209ENST00000560588 MFAP1P55081 439 aaKnown RBP12.9□□□□□ -0.34
RMDN3-209ENST00000560588 NLRP6P59044 892 aa12.9□□□□□ -0.34
RMDN3-209ENST00000560588 MCM10Q7L590 875 aa12.9□□□□□ -0.34
RMDN3-209ENST00000560588 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
RMDN3-209ENST00000560588 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
RMDN3-209ENST00000560588 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
RMDN3-209ENST00000560588 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
RMDN3-209ENST00000560588 KCNA6P17658 529 aa12.89□□□□□ -0.35
RMDN3-209ENST00000560588 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
RMDN3-209ENST00000560588 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
RMDN3-209ENST00000560588 EYA1Q99502 592 aa12.89□□□□□ -0.35
RMDN3-209ENST00000560588 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
RMDN3-209ENST00000560588 GSE1Q14687 1217 aa12.89□□□□□ -0.35
RMDN3-209ENST00000560588 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
RMDN3-209ENST00000560588 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
RMDN3-209ENST00000560588 HOXC9P31274 260 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 SNX21Q969T3 373 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 C1orf115Q9H7X2 142 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 HSCBQ8IWL3 235 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 BCL11AQ9H165 835 aa12.88□□□□□ -0.35
RMDN3-209ENST00000560588 GNAT3A8MTJ3 354 aa12.87□□□□□ -0.35
RMDN3-209ENST00000560588 HMMRO75330 724 aa12.87□□□□□ -0.35
RMDN3-209ENST00000560588 SOX12O15370 315 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 CDC45O75419 566 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 STK31Q9BXU1 1019 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
RMDN3-209ENST00000560588 SETD1BQ9UPS6 1966 aaKnown RBP12.86□□□□□ -0.35
RMDN3-209ENST00000560588 PHRF1Q9P1Y6 1649 aaKnown RBP12.85□□□□□ -0.35
RMDN3-209ENST00000560588 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
RMDN3-209ENST00000560588 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
RMDN3-209ENST00000560588 ABTB2Q8N961 1025 aa12.85□□□□□ -0.35
RMDN3-209ENST00000560588 N4BP2Q86UW6 1770 aaPredicted RBP12.85□□□□□ -0.35
RMDN3-209ENST00000560588 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
RMDN3-209ENST00000560588 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
RMDN3-209ENST00000560588 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
RMDN3-209ENST00000560588 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
RMDN3-209ENST00000560588 MSH6P52701 1360 aa12.84□□□□□ -0.35
RMDN3-209ENST00000560588 LTN1O94822 1766 aa12.84□□□□□ -0.35
RMDN3-209ENST00000560588 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
RMDN3-209ENST00000560588 KCNH5Q8NCM2 988 aa12.84□□□□□ -0.35
RMDN3-209ENST00000560588 PXDNLA1KZ92 1463 aa12.83□□□□□ -0.35
RMDN3-209ENST00000560588 IP6K1Q92551 441 aa12.83□□□□□ -0.36
RMDN3-209ENST00000560588 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
RMDN3-209ENST00000560588 NFAT5O94916 1531 aa12.83□□□□□ -0.36
RMDN3-209ENST00000560588 FOXO3O43524 673 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
RMDN3-209ENST00000560588 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
RMDN3-209ENST00000560588 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 TTC22Q5TAA0 569 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 CASC1Q6TDU7 716 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
RMDN3-209ENST00000560588 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
RMDN3-209ENST00000560588 GNAI3P08754 354 aa12.81□□□□□ -0.36
RMDN3-209ENST00000560588 GNAI2P04899 355 aa12.81□□□□□ -0.36
RMDN3-209ENST00000560588 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
RMDN3-209ENST00000560588 HOXB7P09629 217 aa12.8□□□□□ -0.36
RMDN3-209ENST00000560588 MEIS3Q99687 375 aa12.8□□□□□ -0.36
RMDN3-209ENST00000560588 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
RMDN3-209ENST00000560588 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
RMDN3-209ENST00000560588 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
RMDN3-209ENST00000560588 PSME1Q06323 249 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 FLIIQ13045 1269 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 LMO7Q8WWI1 1683 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 PTMSP20962 102 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
RMDN3-209ENST00000560588 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.36
RMDN3-209ENST00000560588 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.36
RMDN3-209ENST00000560588 NUTM2GQ5VZR2 741 aa12.77□□□□□ -0.36
RMDN3-209ENST00000560588 G2E3Q7L622 706 aa12.77□□□□□ -0.36
RMDN3-209ENST00000560588 IL17REQ8NFR9 667 aa12.77□□□□□ -0.36
RMDN3-209ENST00000560588 SLIT3O75094 1523 aa12.77□□□□□ -0.36
RMDN3-209ENST00000560588 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
RMDN3-209ENST00000560588 RABEP1Q15276 862 aa12.77□□□□□ -0.37
RMDN3-209ENST00000560588 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
RMDN3-209ENST00000560588 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
RMDN3-209ENST00000560588 SLC4A10Q6U841 1118 aa12.76□□□□□ -0.37
RMDN3-209ENST00000560588 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
RMDN3-209ENST00000560588 DDX11L8A8MPP1 907 aa12.76□□□□□ -0.37
RMDN3-209ENST00000560588 MCM4P33991 863 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms