RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 KAT6BQ8WYB5 2073 aa14.23□□□□□ -0.13
SNRPA1-212ENST00000560496 RRS1Q15050 365 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-212ENST00000560496 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
SNRPA1-212ENST00000560496 GGNBP2Q9H3C7 697 aa14.23□□□□□ -0.13
SNRPA1-212ENST00000560496 GOLGB1Q14789 3259 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-212ENST00000560496 SMG6Q86US8 1419 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-212ENST00000560496 FLT4P35916 1363 aa14.22□□□□□ -0.13
SNRPA1-212ENST00000560496 INSRP06213 1382 aa14.22□□□□□ -0.13
SNRPA1-212ENST00000560496 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
SNRPA1-212ENST00000560496 AMPHP49418 695 aa14.21□□□□□ -0.13
SNRPA1-212ENST00000560496 SLC15A2Q16348 729 aa14.21□□□□□ -0.13
SNRPA1-212ENST00000560496 PTGER2P43116 358 aa14.2□□□□□ -0.14
SNRPA1-212ENST00000560496 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
SNRPA1-212ENST00000560496 CARD14Q9BXL6 1004 aa14.2□□□□□ -0.14
SNRPA1-212ENST00000560496 STK32BQ9NY57 414 aa14.2□□□□□ -0.14
SNRPA1-212ENST00000560496 ZBTB7AO95365 584 aa14.19□□□□□ -0.14
SNRPA1-212ENST00000560496 CDCA8Q53HL2 280 aa14.19□□□□□ -0.14
SNRPA1-212ENST00000560496 LRRC4BQ9NT99 713 aa14.19□□□□□ -0.14
SNRPA1-212ENST00000560496 TIMELESSQ9UNS1 1208 aa14.19□□□□□ -0.14
SNRPA1-212ENST00000560496 NBPF6Q5VWK0 638 aa14.18□□□□□ -0.14
SNRPA1-212ENST00000560496 USHBP1Q8N6Y0 703 aa14.18□□□□□ -0.14
SNRPA1-212ENST00000560496 NBPF4Q96M43 638 aa14.18□□□□□ -0.14
SNRPA1-212ENST00000560496 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
SNRPA1-212ENST00000560496 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
SNRPA1-212ENST00000560496 DDX54Q8TDD1 881 aaKnown RBP14.17□□□□□ -0.14
SNRPA1-212ENST00000560496 HSP90AB2PQ58FF8 381 aa14.16□□□□□ -0.14
SNRPA1-212ENST00000560496 EMILIN1Q9Y6C2 1016 aa14.16□□□□□ -0.14
SNRPA1-212ENST00000560496 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
SNRPA1-212ENST00000560496 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
SNRPA1-212ENST00000560496 MTFR1LQ9H019 292 aa14.15□□□□□ -0.14
SNRPA1-212ENST00000560496 C4BP0C0L5 1744 aa14.15□□□□□ -0.14
SNRPA1-212ENST00000560496 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.15
SNRPA1-212ENST00000560496 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
SNRPA1-212ENST00000560496 MAP3K5Q99683 1374 aa14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 SLC27A3Q5K4L6 730 aa14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 CHD4Q14839 1912 aa14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 PNPLA7Q6ZV29 1317 aa14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 PCDH11XQ9BZA7 1347 aa14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 PCDH11YQ9BZA8 1340 aa14.13□□□□□ -0.15
SNRPA1-212ENST00000560496 PRIM1P49642 420 aaKnown RBP14.12□□□□□ -0.15
SNRPA1-212ENST00000560496 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
SNRPA1-212ENST00000560496 KCNQ4P56696 695 aa14.11□□□□□ -0.15
SNRPA1-212ENST00000560496 RAPGEF4Q8WZA2 1011 aa14.11□□□□□ -0.15
SNRPA1-212ENST00000560496 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-212ENST00000560496 TATP17735 454 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-212ENST00000560496 FHDC1Q9C0D6 1143 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-212ENST00000560496 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
SNRPA1-212ENST00000560496 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
SNRPA1-212ENST00000560496 CYP27B1O15528 508 aa14.09□□□□□ -0.15
SNRPA1-212ENST00000560496 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
SNRPA1-212ENST00000560496 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-212ENST00000560496 WASHC2AQ641Q2 1341 aa14.08□□□□□ -0.16
SNRPA1-212ENST00000560496 PALLDQ8WX93 1383 aa14.08□□□□□ -0.16
SNRPA1-212ENST00000560496 PLEKHG2Q9H7P9 1386 aa14.08□□□□□ -0.16
SNRPA1-212ENST00000560496 VIRMAQ69YN4 1812 aaKnown RBP14.07□□□□□ -0.16
SNRPA1-212ENST00000560496 YY1P25490 414 aa14.07□□□□□ -0.16
SNRPA1-212ENST00000560496 SYT17Q9BSW7 474 aa14.07□□□□□ -0.16
SNRPA1-212ENST00000560496 POLKQ9UBT6 870 aa14.07□□□□□ -0.16
SNRPA1-212ENST00000560496 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-212ENST00000560496 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNRPA1-212ENST00000560496 ARXQ96QS3 562 aa14.06□□□□□ -0.16
SNRPA1-212ENST00000560496 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-212ENST00000560496 SLC16A10Q8TF71 515 aa14.05□□□□□ -0.16
SNRPA1-212ENST00000560496 EYA1Q99502 592 aa14.05□□□□□ -0.16
SNRPA1-212ENST00000560496 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
SNRPA1-212ENST00000560496 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-212ENST00000560496 IGSF1Q8N6C5 1336 aa14.04□□□□□ -0.16
SNRPA1-212ENST00000560496 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-212ENST00000560496 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-212ENST00000560496 POLR3GLQ9BT43 218 aa14.03□□□□□ -0.16
SNRPA1-212ENST00000560496 TFCP2L1Q9NZI6 479 aa14.03□□□□□ -0.16
SNRPA1-212ENST00000560496 SCN11AQ9UI33 1791 aa14.03□□□□□ -0.16
SNRPA1-212ENST00000560496 TJP1Q07157 1748 aa14.02□□□□□ -0.16
SNRPA1-212ENST00000560496 KIAA1551Q9HCM1 1747 aa14.02□□□□□ -0.16
SNRPA1-212ENST00000560496 KDRP35968 1356 aa14.02□□□□□ -0.17
SNRPA1-212ENST00000560496 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-212ENST00000560496 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-212ENST00000560496 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
SNRPA1-212ENST00000560496 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
SNRPA1-212ENST00000560496 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
SNRPA1-212ENST00000560496 AMIGO3Q86WK7 504 aa14□□□□□ -0.17
SNRPA1-212ENST00000560496 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
SNRPA1-212ENST00000560496 PIGBQ92521 554 aa14□□□□□ -0.17
SNRPA1-212ENST00000560496 PANK3Q9H999 370 aa14□□□□□ -0.17
SNRPA1-212ENST00000560496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14□□□□□ -0.17
SNRPA1-212ENST00000560496 ADAMTS7Q9UKP4 1686 aa14□□□□□ -0.17
SNRPA1-212ENST00000560496 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
SNRPA1-212ENST00000560496 PHKG2P15735 406 aa13.99□□□□□ -0.17
SNRPA1-212ENST00000560496 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
SNRPA1-212ENST00000560496 POLD1P28340 1107 aa13.98□□□□□ -0.17
SNRPA1-212ENST00000560496 NLGN2Q8NFZ4 835 aa13.98□□□□□ -0.17
SNRPA1-212ENST00000560496 MSL1Q68DK7 614 aa13.97□□□□□ -0.17
SNRPA1-212ENST00000560496 MRC1P22897 1456 aa13.97□□□□□ -0.17
SNRPA1-212ENST00000560496 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-212ENST00000560496 KIF7Q2M1P5 1343 aa13.96□□□□□ -0.17
SNRPA1-212ENST00000560496 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
SNRPA1-212ENST00000560496 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-212ENST00000560496 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
SNRPA1-212ENST00000560496 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms