RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 POLD1P28340 1107 aa14.88□□□□□ -0.03
CDC42BPB-207ENST00000560492 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
CDC42BPB-207ENST00000560492 CARD11Q9BXL7 1154 aa14.88□□□□□ -0.03
CDC42BPB-207ENST00000560492 DOT1LQ8TEK3 1739 aa14.88□□□□□ -0.03
CDC42BPB-207ENST00000560492 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
CDC42BPB-207ENST00000560492 USP31Q70CQ4 1352 aa14.87□□□□□ -0.03
CDC42BPB-207ENST00000560492 SGIP1Q9BQI5 828 aa14.87□□□□□ -0.03
CDC42BPB-207ENST00000560492 QSER1Q2KHR3 1735 aa14.86□□□□□ -0.03
CDC42BPB-207ENST00000560492 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
CDC42BPB-207ENST00000560492 TFCP2L1Q9NZI6 479 aa14.86□□□□□ -0.03
CDC42BPB-207ENST00000560492 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
CDC42BPB-207ENST00000560492 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
CDC42BPB-207ENST00000560492 EDC4Q6P2E9 1401 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-207ENST00000560492 SLC12A5Q9H2X9 1139 aa14.85□□□□□ -0.03
CDC42BPB-207ENST00000560492 LRRC4BQ9NT99 713 aa14.85□□□□□ -0.03
CDC42BPB-207ENST00000560492 UTRNP46939 3433 aa14.85□□□□□ -0.03
CDC42BPB-207ENST00000560492 CD163L1Q9NR16 1453 aa14.84□□□□□ -0.03
CDC42BPB-207ENST00000560492 KCNQ4P56696 695 aa14.84□□□□□ -0.03
CDC42BPB-207ENST00000560492 C1QTNF8P60827 252 aa14.83□□□□□ -0.04
CDC42BPB-207ENST00000560492 SLC27A3Q5K4L6 730 aa14.83□□□□□ -0.04
CDC42BPB-207ENST00000560492 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
CDC42BPB-207ENST00000560492 MAP3K5Q99683 1374 aa14.83□□□□□ -0.04
CDC42BPB-207ENST00000560492 AMPHP49418 695 aa14.82□□□□□ -0.04
CDC42BPB-207ENST00000560492 SLC16A10Q8TF71 515 aa14.82□□□□□ -0.04
CDC42BPB-207ENST00000560492 LY75O60449 1722 aa14.81□□□□□ -0.04
CDC42BPB-207ENST00000560492 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
CDC42BPB-207ENST00000560492 PRIM1P49642 420 aaKnown RBP14.81□□□□□ -0.04
CDC42BPB-207ENST00000560492 IP6K1Q92551 441 aa14.81□□□□□ -0.04
CDC42BPB-207ENST00000560492 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
CDC42BPB-207ENST00000560492 COG3Q96JB2 828 aa14.81□□□□□ -0.04
CDC42BPB-207ENST00000560492 PNPLA7Q6ZV29 1317 aa14.8□□□□□ -0.04
CDC42BPB-207ENST00000560492 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
CDC42BPB-207ENST00000560492 SHANK3Q9BYB0 1731 aa14.79□□□□□ -0.04
CDC42BPB-207ENST00000560492 CCNL1Q9UK58 526 aaPredicted RBP14.79□□□□□ -0.04
CDC42BPB-207ENST00000560492 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
CDC42BPB-207ENST00000560492 NLGN2Q8NFZ4 835 aa14.78□□□□□ -0.04
CDC42BPB-207ENST00000560492 ZCRB1Q8TBF4 217 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-207ENST00000560492 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-207ENST00000560492 USP47Q96K76 1375 aa14.77□□□□□ -0.04
CDC42BPB-207ENST00000560492 MSL1Q68DK7 614 aa14.77□□□□□ -0.05
CDC42BPB-207ENST00000560492 COL24A1Q17RW2 1714 aa14.77□□□□□ -0.05
CDC42BPB-207ENST00000560492 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
CDC42BPB-207ENST00000560492 HOXC9P31274 260 aa14.76□□□□□ -0.05
CDC42BPB-207ENST00000560492 SMG6Q86US8 1419 aaKnown RBP14.75□□□□□ -0.05
CDC42BPB-207ENST00000560492 C5P01031 1676 aa14.75□□□□□ -0.05
CDC42BPB-207ENST00000560492 FBLN1P23142 703 aa14.75□□□□□ -0.05
CDC42BPB-207ENST00000560492 USHBP1Q8N6Y0 703 aa14.75□□□□□ -0.05
CDC42BPB-207ENST00000560492 MEGF6O75095 1541 aa14.75□□□□□ -0.05
CDC42BPB-207ENST00000560492 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
CDC42BPB-207ENST00000560492 RAPGEF4Q8WZA2 1011 aa14.74□□□□□ -0.05
CDC42BPB-207ENST00000560492 GRIN3BO60391 1043 aa14.73□□□□□ -0.05
CDC42BPB-207ENST00000560492 RRS1Q15050 365 aaKnown RBP14.73□□□□□ -0.05
CDC42BPB-207ENST00000560492 NSD2O96028 1365 aa14.73□□□□□ -0.05
CDC42BPB-207ENST00000560492 KIF20BQ96Q89 1820 aa14.72□□□□□ -0.05
CDC42BPB-207ENST00000560492 COL23A1Q86Y22 540 aaPredicted RBP14.72□□□□□ -0.05
CDC42BPB-207ENST00000560492 TAF1LQ8IZX4 1826 aa14.71□□□□□ -0.05
CDC42BPB-207ENST00000560492 YBX3P16989 372 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDC42BPB-207ENST00000560492 TATP17735 454 aaPredicted RBP14.71□□□□□ -0.05
CDC42BPB-207ENST00000560492 RTL1A6NKG5 1358 aa14.71□□□□□ -0.06
CDC42BPB-207ENST00000560492 ST20-MTHFSA0A0A6YYL1 179 aa14.7□□□□□ -0.06
CDC42BPB-207ENST00000560492 PUS7Q96PZ0 661 aaKnown RBP14.7□□□□□ -0.06
CDC42BPB-207ENST00000560492 GGNBP2Q9H3C7 697 aa14.7□□□□□ -0.06
CDC42BPB-207ENST00000560492 ITGB4P16144 1822 aa14.69□□□□□ -0.06
CDC42BPB-207ENST00000560492 NBPF6Q5VWK0 638 aa14.69□□□□□ -0.06
CDC42BPB-207ENST00000560492 MPRIPQ6WCQ1 1025 aa14.69□□□□□ -0.06
CDC42BPB-207ENST00000560492 ZNF526Q8TF50 670 aaPredicted RBP14.69□□□□□ -0.06
CDC42BPB-207ENST00000560492 NBPF4Q96M43 638 aa14.69□□□□□ -0.06
CDC42BPB-207ENST00000560492 CGNL1Q0VF96 1302 aa14.68□□□□□ -0.06
CDC42BPB-207ENST00000560492 PCDH11XQ9BZA7 1347 aa14.68□□□□□ -0.06
CDC42BPB-207ENST00000560492 PCDH11YQ9BZA8 1340 aa14.68□□□□□ -0.06
CDC42BPB-207ENST00000560492 AK7Q96M32 723 aa14.68□□□□□ -0.06
CDC42BPB-207ENST00000560492 WWC3Q9ULE0 1092 aa14.68□□□□□ -0.06
CDC42BPB-207ENST00000560492 PALLDQ8WX93 1383 aa14.68□□□□□ -0.06
CDC42BPB-207ENST00000560492 ATP10DQ9P241 1426 aa14.67□□□□□ -0.06
CDC42BPB-207ENST00000560492 PHF14O94880 888 aa14.67□□□□□ -0.06
CDC42BPB-207ENST00000560492 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
CDC42BPB-207ENST00000560492 C4BP0C0L5 1744 aa14.66□□□□□ -0.06
CDC42BPB-207ENST00000560492 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
CDC42BPB-207ENST00000560492 FLAD1Q8NFF5 587 aa14.66□□□□□ -0.06
CDC42BPB-207ENST00000560492 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
CDC42BPB-207ENST00000560492 TESK2Q96S53 571 aa14.65□□□□□ -0.06
CDC42BPB-207ENST00000560492 TOGARAM1Q9Y4F4 1720 aa14.65□□□□□ -0.06
CDC42BPB-207ENST00000560492 PPM1GO15355 546 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPB-207ENST00000560492 TMF1P82094 1093 aa14.64□□□□□ -0.07
CDC42BPB-207ENST00000560492 HSP90AB2PQ58FF8 381 aa14.64□□□□□ -0.07
CDC42BPB-207ENST00000560492 CD2APQ9Y5K6 639 aa14.64□□□□□ -0.07
CDC42BPB-207ENST00000560492 UBR3Q6ZT12 1888 aa14.63□□□□□ -0.07
CDC42BPB-207ENST00000560492 FLT4P35916 1363 aa14.63□□□□□ -0.07
CDC42BPB-207ENST00000560492 FYB1O15117 783 aa14.63□□□□□ -0.07
CDC42BPB-207ENST00000560492 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
CDC42BPB-207ENST00000560492 INSRP06213 1382 aa14.62□□□□□ -0.07
CDC42BPB-207ENST00000560492 PKD1L3Q7Z443 1732 aa14.62□□□□□ -0.07
CDC42BPB-207ENST00000560492 NSD3Q9BZ95 1437 aa14.62□□□□□ -0.07
CDC42BPB-207ENST00000560492 CEP350Q5VT06 3117 aa14.61□□□□□ -0.07
CDC42BPB-207ENST00000560492 IGSF1Q8N6C5 1336 aa14.61□□□□□ -0.07
CDC42BPB-207ENST00000560492 IFFO2Q5TF58 517 aa14.6□□□□□ -0.07
CDC42BPB-207ENST00000560492 SMIM5Q71RC9 77 aa14.6□□□□□ -0.07
CDC42BPB-207ENST00000560492 MAP2P11137 1827 aaKnown RBP14.59□□□□□ -0.07
CDC42BPB-207ENST00000560492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.59□□□□□ -0.07
CDC42BPB-207ENST00000560492 CYP27B1O15528 508 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms