RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ANKRD36BQ8N2N9 1353 aa13.26□□□□□ -0.29
SMAD3-215ENST00000560424 USP47Q96K76 1375 aa13.26□□□□□ -0.29
SMAD3-215ENST00000560424 CAPN15O75808 1086 aa13.25□□□□□ -0.29
SMAD3-215ENST00000560424 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
SMAD3-215ENST00000560424 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
SMAD3-215ENST00000560424 LY75O60449 1722 aa13.25□□□□□ -0.29
SMAD3-215ENST00000560424 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
SMAD3-215ENST00000560424 KIF3CO14782 793 aa13.24□□□□□ -0.29
SMAD3-215ENST00000560424 LTV1Q96GA3 475 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-215ENST00000560424 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
SMAD3-215ENST00000560424 TOMM70O94826 608 aa13.22□□□□□ -0.29
SMAD3-215ENST00000560424 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.29
SMAD3-215ENST00000560424 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
SMAD3-215ENST00000560424 NME9Q86XW9 330 aa13.21□□□□□ -0.29
SMAD3-215ENST00000560424 ZCRB1Q8TBF4 217 aaKnown RBP13.21□□□□□ -0.29
SMAD3-215ENST00000560424 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
SMAD3-215ENST00000560424 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-215ENST00000560424 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-215ENST00000560424 AK7Q96M32 723 aa13.2□□□□□ -0.3
SMAD3-215ENST00000560424 NSD2O96028 1365 aa13.2□□□□□ -0.3
SMAD3-215ENST00000560424 C5P01031 1676 aa13.19□□□□□ -0.3
SMAD3-215ENST00000560424 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
SMAD3-215ENST00000560424 TMC1Q8TDI8 760 aa13.19□□□□□ -0.3
SMAD3-215ENST00000560424 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
SMAD3-215ENST00000560424 PHF14O94880 888 aa13.18□□□□□ -0.3
SMAD3-215ENST00000560424 DNAJC5GQ8N7S2 189 aa13.18□□□□□ -0.3
SMAD3-215ENST00000560424 IP6K1Q92551 441 aa13.18□□□□□ -0.3
SMAD3-215ENST00000560424 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-215ENST00000560424 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
SMAD3-215ENST00000560424 NSD3Q9BZ95 1437 aa13.16□□□□□ -0.3
SMAD3-215ENST00000560424 AMPHP49418 695 aa13.16□□□□□ -0.3
SMAD3-215ENST00000560424 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
SMAD3-215ENST00000560424 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
SMAD3-215ENST00000560424 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
SMAD3-215ENST00000560424 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
SMAD3-215ENST00000560424 ZEB1P37275 1124 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-215ENST00000560424 PRELPP51888 382 aa13.14□□□□□ -0.31
SMAD3-215ENST00000560424 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
SMAD3-215ENST00000560424 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
SMAD3-215ENST00000560424 SBNO2Q9Y2G9 1366 aa13.14□□□□□ -0.31
SMAD3-215ENST00000560424 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
SMAD3-215ENST00000560424 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
SMAD3-215ENST00000560424 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
SMAD3-215ENST00000560424 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
SMAD3-215ENST00000560424 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-215ENST00000560424 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
SMAD3-215ENST00000560424 MEGF6O75095 1541 aa13.13□□□□□ -0.31
SMAD3-215ENST00000560424 TAF1LQ8IZX4 1826 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
SMAD3-215ENST00000560424 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 COG3Q96JB2 828 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 SMG6Q86US8 1419 aaKnown RBP13.12□□□□□ -0.31
SMAD3-215ENST00000560424 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
SMAD3-215ENST00000560424 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-215ENST00000560424 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-215ENST00000560424 HOXC9P31274 260 aa13.11□□□□□ -0.31
SMAD3-215ENST00000560424 FSTL1Q12841 308 aa13.11□□□□□ -0.31
SMAD3-215ENST00000560424 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
SMAD3-215ENST00000560424 SSFA2P28290 1259 aa13.1□□□□□ -0.31
SMAD3-215ENST00000560424 HTRA3P83110 453 aa13.1□□□□□ -0.31
SMAD3-215ENST00000560424 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
SMAD3-215ENST00000560424 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
SMAD3-215ENST00000560424 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
SMAD3-215ENST00000560424 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
SMAD3-215ENST00000560424 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
SMAD3-215ENST00000560424 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
SMAD3-215ENST00000560424 PLEKHG2Q9H7P9 1386 aa13.08□□□□□ -0.31
SMAD3-215ENST00000560424 FCHSD2O94868 740 aa13.08□□□□□ -0.32
SMAD3-215ENST00000560424 TGFB2P61812 414 aa13.08□□□□□ -0.32
SMAD3-215ENST00000560424 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
SMAD3-215ENST00000560424 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
SMAD3-215ENST00000560424 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
SMAD3-215ENST00000560424 GNPATO15228 680 aa13.07□□□□□ -0.32
SMAD3-215ENST00000560424 MMP10P09238 476 aa13.07□□□□□ -0.32
SMAD3-215ENST00000560424 SMIM5Q71RC9 77 aa13.07□□□□□ -0.32
SMAD3-215ENST00000560424 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-215ENST00000560424 PXDNLA1KZ92 1463 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 C9orf131Q5VYM1 1079 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
SMAD3-215ENST00000560424 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
SMAD3-215ENST00000560424 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-215ENST00000560424 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
SMAD3-215ENST00000560424 LOC102724428A0A0B4J2F2 783 aa13.04□□□□□ -0.32
SMAD3-215ENST00000560424 SIK1P57059 783 aa13.04□□□□□ -0.32
SMAD3-215ENST00000560424 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
SMAD3-215ENST00000560424 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
SMAD3-215ENST00000560424 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
SMAD3-215ENST00000560424 FBLN1P23142 703 aa13.03□□□□□ -0.32
SMAD3-215ENST00000560424 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
SMAD3-215ENST00000560424 LINC00116Q8NCU8 138 aa13.03□□□□□ -0.32
SMAD3-215ENST00000560424 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
SMAD3-215ENST00000560424 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
SMAD3-215ENST00000560424 ITGB4P16144 1822 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms