RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
MARK3-220ENST00000560417 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
MARK3-220ENST00000560417 MRGPRX2Q96LB1 330 aa10.14□□□□□ -0.79
MARK3-220ENST00000560417 SLAIN2Q9P270 581 aa10.14□□□□□ -0.79
MARK3-220ENST00000560417 ADH1CP00326 375 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 FSHRP23945 695 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 SCTRP47872 440 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 RAB15P59190 212 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 KCNA1Q09470 495 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 PLA2G2EQ9NZK7 142 aa10.13□□□□□ -0.79
MARK3-220ENST00000560417 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
MARK3-220ENST00000560417 DHX9Q08211 1270 aaKnown RBP10.11□□□□□ -0.79
MARK3-220ENST00000560417 NR5A1Q13285 461 aa10.11□□□□□ -0.79
MARK3-220ENST00000560417 SWI5Q1ZZU3 235 aa10.11□□□□□ -0.79
MARK3-220ENST00000560417 CCDC102BQ68D86 513 aa10.11□□□□□ -0.79
MARK3-220ENST00000560417 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
MARK3-220ENST00000560417 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
MARK3-220ENST00000560417 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
MARK3-220ENST00000560417 PHLDB3Q6NSJ2 640 aa10.1□□□□□ -0.79
MARK3-220ENST00000560417 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
MARK3-220ENST00000560417 MYCP01106 439 aaPredicted RBP10.09□□□□□ -0.79
MARK3-220ENST00000560417 SSFA2P28290 1259 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 SEC13P55735 322 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 ZNF697Q5TEC3 545 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 OSBPL3Q9H4L5 887 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
MARK3-220ENST00000560417 LILRA1O75019 489 aa10.08□□□□□ -0.8
MARK3-220ENST00000560417 NR3C2P08235 984 aa10.08□□□□□ -0.8
MARK3-220ENST00000560417 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
MARK3-220ENST00000560417 ZNF784Q8NCA9 323 aaPredicted RBP10.08□□□□□ -0.8
MARK3-220ENST00000560417 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
MARK3-220ENST00000560417 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
MARK3-220ENST00000560417 SFI1A8K8P3 1242 aa10.06□□□□□ -0.8
MARK3-220ENST00000560417 M0R2N6 131 aa10.06□□□□□ -0.8
MARK3-220ENST00000560417 TRIM52Q96A61 297 aa10.06□□□□□ -0.8
MARK3-220ENST00000560417 PRKD2Q9BZL6 878 aa10.06□□□□□ -0.8
MARK3-220ENST00000560417 CYLDQ9NQC7 956 aa10.06□□□□□ -0.8
MARK3-220ENST00000560417 TMEM229AB2RXF0 380 aa10.05□□□□□ -0.8
MARK3-220ENST00000560417 WASLO00401 505 aaPredicted RBP10.05□□□□□ -0.8
MARK3-220ENST00000560417 PSME1Q06323 249 aa10.05□□□□□ -0.8
MARK3-220ENST00000560417 GNEQ9Y223 722 aaKnown RBP10.05□□□□□ -0.8
MARK3-220ENST00000560417 GDF9O60383 454 aa10.04□□□□□ -0.8
MARK3-220ENST00000560417 SCNN1DP51172 638 aa10.04□□□□□ -0.8
MARK3-220ENST00000560417 MYT1Q01538 1121 aa10.04□□□□□ -0.8
MARK3-220ENST00000560417 TXNDC2Q86VQ3 553 aa10.04□□□□□ -0.8
MARK3-220ENST00000560417 ADD1P35611 737 aaKnown RBP10.03□□□□□ -0.8
MARK3-220ENST00000560417 OCLNQ16625 522 aa10.03□□□□□ -0.8
MARK3-220ENST00000560417 C1orf216Q8TAB5 229 aa10.03□□□□□ -0.8
MARK3-220ENST00000560417 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
MARK3-220ENST00000560417 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
MARK3-220ENST00000560417 EMILIN1Q9Y6C2 1016 aa10.03□□□□□ -0.8
MARK3-220ENST00000560417 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
MARK3-220ENST00000560417 ATP2B4P23634 1241 aa10.02□□□□□ -0.81
MARK3-220ENST00000560417 FOXC1Q12948 553 aa10.02□□□□□ -0.81
MARK3-220ENST00000560417 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
MARK3-220ENST00000560417 GZF1Q9H116 711 aaPredicted RBP10.02□□□□□ -0.81
MARK3-220ENST00000560417 ZNF358Q9NW07 568 aa10.02□□□□□ -0.81
MARK3-220ENST00000560417 IVNS1ABPQ9Y6Y0 642 aa10.02□□□□□ -0.81
MARK3-220ENST00000560417 NNTQ13423 1086 aa10.01□□□□□ -0.81
MARK3-220ENST00000560417 KLF16Q9BXK1 252 aaPredicted RBP10.01□□□□□ -0.81
MARK3-220ENST00000560417 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
MARK3-220ENST00000560417 STAU1O95793 577 aaKnown RBP10□□□□□ -0.81
MARK3-220ENST00000560417 GNRH1P01148 92 aa10□□□□□ -0.81
MARK3-220ENST00000560417 GDF10P55107 478 aa10□□□□□ -0.81
MARK3-220ENST00000560417 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
MARK3-220ENST00000560417 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
MARK3-220ENST00000560417 ESF1Q9H501 851 aaKnown RBP10□□□□□ -0.81
MARK3-220ENST00000560417 TOR4AQ9NXH8 423 aa10□□□□□ -0.81
MARK3-220ENST00000560417 CXXC1Q9P0U4 656 aaPredicted RBP10□□□□□ -0.81
MARK3-220ENST00000560417 INHAP05111 366 aa9.99□□□□□ -0.81
MARK3-220ENST00000560417 WEE1P30291 646 aa9.99□□□□□ -0.81
MARK3-220ENST00000560417 TAS1R3Q7RTX0 852 aa9.99□□□□□ -0.81
MARK3-220ENST00000560417 ETNK1Q9HBU6 452 aa9.99□□□□□ -0.81
MARK3-220ENST00000560417 PRMT3O60678 531 aa9.98□□□□□ -0.81
MARK3-220ENST00000560417 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
MARK3-220ENST00000560417 EPHA4P54764 986 aa9.98□□□□□ -0.81
MARK3-220ENST00000560417 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
MARK3-220ENST00000560417 KDF1Q8NAX2 398 aaPredicted RBP9.98□□□□□ -0.81
MARK3-220ENST00000560417 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
MARK3-220ENST00000560417 WASF2Q9Y6W5 498 aa9.98□□□□□ -0.81
MARK3-220ENST00000560417 J3QL48 77 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 PRR20EP86478 221 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 PRR20CP86479 221 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 PRR20DP86480 221 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 PRR20BP86481 221 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 PRR20AP86496 221 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 Q6ZVU0 165 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 PRIMPOLQ96LW4 560 aa9.97□□□□□ -0.81
MARK3-220ENST00000560417 BACH1O14867 736 aa9.96□□□□□ -0.82
MARK3-220ENST00000560417 CCER1Q8TC90 406 aaPredicted RBP9.96□□□□□ -0.82
MARK3-220ENST00000560417 ITPKCQ96DU7 683 aa9.96□□□□□ -0.82
MARK3-220ENST00000560417 HINFPQ9BQA5 517 aa9.96□□□□□ -0.82
MARK3-220ENST00000560417 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
MARK3-220ENST00000560417 LGR5O75473 907 aa9.95□□□□□ -0.82
MARK3-220ENST00000560417 ADH1AP07327 375 aa9.95□□□□□ -0.82
MARK3-220ENST00000560417 HRH3Q9Y5N1 445 aa9.95□□□□□ -0.82
MARK3-220ENST00000560417 TNFRSF10AO00220 468 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms