RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SYTL4Q96C24 671 aaPredicted RBP18.39■□□□□ 0.53
RABGGTA-213ENST00000560127 TAF1LQ8IZX4 1826 aa18.39■□□□□ 0.53
RABGGTA-213ENST00000560127 ADCY9O60503 1353 aa18.38■□□□□ 0.53
RABGGTA-213ENST00000560127 HSPA6P17066 643 aa18.37■□□□□ 0.53
RABGGTA-213ENST00000560127 GPBP1L1Q9HC44 474 aaPredicted RBP18.37■□□□□ 0.53
RABGGTA-213ENST00000560127 C5P01031 1676 aa18.37■□□□□ 0.53
RABGGTA-213ENST00000560127 MSH5O43196 834 aa18.36■□□□□ 0.53
RABGGTA-213ENST00000560127 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-213ENST00000560127 MSL1Q68DK7 614 aa18.36■□□□□ 0.53
RABGGTA-213ENST00000560127 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-213ENST00000560127 IP6K1Q92551 441 aa18.35■□□□□ 0.53
RABGGTA-213ENST00000560127 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-213ENST00000560127 ZNF526Q8TF50 670 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-213ENST00000560127 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.52
RABGGTA-213ENST00000560127 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-213ENST00000560127 MEGF6O75095 1541 aa18.32■□□□□ 0.52
RABGGTA-213ENST00000560127 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
RABGGTA-213ENST00000560127 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
RABGGTA-213ENST00000560127 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-213ENST00000560127 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
RABGGTA-213ENST00000560127 USP47Q96K76 1375 aa18.3■□□□□ 0.52
RABGGTA-213ENST00000560127 UBR3Q6ZT12 1888 aa18.29■□□□□ 0.52
RABGGTA-213ENST00000560127 ITGB4P16144 1822 aa18.29■□□□□ 0.52
RABGGTA-213ENST00000560127 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
RABGGTA-213ENST00000560127 A0A1W2PP64 1363 aa18.29■□□□□ 0.52
RABGGTA-213ENST00000560127 C4BP0C0L5 1744 aa18.26■□□□□ 0.51
RABGGTA-213ENST00000560127 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
RABGGTA-213ENST00000560127 HOXC9P31274 260 aa18.26■□□□□ 0.51
RABGGTA-213ENST00000560127 KIF3CO14782 793 aa18.25■□□□□ 0.51
RABGGTA-213ENST00000560127 FBLN1P23142 703 aa18.25■□□□□ 0.51
RABGGTA-213ENST00000560127 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
RABGGTA-213ENST00000560127 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
RABGGTA-213ENST00000560127 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
RABGGTA-213ENST00000560127 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
RABGGTA-213ENST00000560127 PCNTO95613 3336 aa18.24■□□□□ 0.51
RABGGTA-213ENST00000560127 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
RABGGTA-213ENST00000560127 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
RABGGTA-213ENST00000560127 AMPHP49418 695 aa18.22■□□□□ 0.51
RABGGTA-213ENST00000560127 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-213ENST00000560127 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-213ENST00000560127 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
RABGGTA-213ENST00000560127 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
RABGGTA-213ENST00000560127 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
RABGGTA-213ENST00000560127 KIF13BQ9NQT8 1826 aa18.2■□□□□ 0.5
RABGGTA-213ENST00000560127 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
RABGGTA-213ENST00000560127 APLP1P51693 650 aa18.19■□□□□ 0.5
RABGGTA-213ENST00000560127 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
RABGGTA-213ENST00000560127 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
RABGGTA-213ENST00000560127 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
RABGGTA-213ENST00000560127 COG3Q96JB2 828 aa18.19■□□□□ 0.5
RABGGTA-213ENST00000560127 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-213ENST00000560127 KIAA1551Q9HCM1 1747 aa18.18■□□□□ 0.5
RABGGTA-213ENST00000560127 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-213ENST00000560127 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
RABGGTA-213ENST00000560127 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
RABGGTA-213ENST00000560127 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
RABGGTA-213ENST00000560127 AK7Q96M32 723 aa18.17■□□□□ 0.5
RABGGTA-213ENST00000560127 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-213ENST00000560127 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
RABGGTA-213ENST00000560127 WDR90Q96KV7 1748 aa18.16■□□□□ 0.5
RABGGTA-213ENST00000560127 RAPGEF4Q8WZA2 1011 aa18.16■□□□□ 0.5
RABGGTA-213ENST00000560127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 PHF14O94880 888 aa18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 RRS1Q15050 365 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 PKD1L3Q7Z443 1732 aa18.15■□□□□ 0.5
RABGGTA-213ENST00000560127 BRCA1P38398 1863 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-213ENST00000560127 CYP27B1O15528 508 aa18.13■□□□□ 0.49
RABGGTA-213ENST00000560127 TOMM70O94826 608 aa18.13■□□□□ 0.49
RABGGTA-213ENST00000560127 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-213ENST00000560127 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
RABGGTA-213ENST00000560127 SSFA2P28290 1259 aa18.11■□□□□ 0.49
RABGGTA-213ENST00000560127 LINC00116Q8NCU8 138 aa18.11■□□□□ 0.49
RABGGTA-213ENST00000560127 SMG6Q86US8 1419 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-213ENST00000560127 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
RABGGTA-213ENST00000560127 PIGBQ92521 554 aa18.1■□□□□ 0.49
RABGGTA-213ENST00000560127 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
RABGGTA-213ENST00000560127 HSP90AB2PQ58FF8 381 aa18.09■□□□□ 0.49
RABGGTA-213ENST00000560127 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
RABGGTA-213ENST00000560127 INSRP06213 1382 aa18.08■□□□□ 0.49
RABGGTA-213ENST00000560127 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
RABGGTA-213ENST00000560127 SIK1P57059 783 aa18.08■□□□□ 0.48
RABGGTA-213ENST00000560127 TESK2Q96S53 571 aa18.08■□□□□ 0.48
RABGGTA-213ENST00000560127 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
RABGGTA-213ENST00000560127 FYB1O15117 783 aa18.07■□□□□ 0.48
RABGGTA-213ENST00000560127 MMP10P09238 476 aa18.07■□□□□ 0.48
RABGGTA-213ENST00000560127 GGNBP2Q9H3C7 697 aa18.07■□□□□ 0.48
RABGGTA-213ENST00000560127 ITPK1Q13572 414 aa18.06■□□□□ 0.48
RABGGTA-213ENST00000560127 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
RABGGTA-213ENST00000560127 BCS1LQ9Y276 419 aa18.06■□□□□ 0.48
RABGGTA-213ENST00000560127 GNPATO15228 680 aa18.05■□□□□ 0.48
RABGGTA-213ENST00000560127 COL13A1Q5TAT6 717 aaPredicted RBP18.05■□□□□ 0.48
RABGGTA-213ENST00000560127 SBF1O95248 1867 aa18.05■□□□□ 0.48
RABGGTA-213ENST00000560127 FLT4P35916 1363 aa18.04■□□□□ 0.48
RABGGTA-213ENST00000560127 A0A0G2JLW4 131 aa18.04■□□□□ 0.48
RABGGTA-213ENST00000560127 TGFB2P61812 414 aa18.04■□□□□ 0.48
RABGGTA-213ENST00000560127 HTRA3P83110 453 aa18.04■□□□□ 0.48
RABGGTA-213ENST00000560127 C10orf71Q711Q0 1435 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms