RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ERICH4A6NGS2 130 aa23.31■■□□□ 1.32
SEMA4B-215ENST00000560089 LTKP29376 864 aa23.31■■□□□ 1.32
SEMA4B-215ENST00000560089 CTIFO43310 598 aaKnown RBP23.31■■□□□ 1.32
SEMA4B-215ENST00000560089 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
SEMA4B-215ENST00000560089 CTNNA3Q9UI47 895 aa23.31■■□□□ 1.32
SEMA4B-215ENST00000560089 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
SEMA4B-215ENST00000560089 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
SEMA4B-215ENST00000560089 DDX41Q9UJV9 622 aaKnown RBP23.29■■□□□ 1.32
SEMA4B-215ENST00000560089 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
SEMA4B-215ENST00000560089 TSPY26PQ9H489 355 aa23.28■■□□□ 1.32
SEMA4B-215ENST00000560089 RARSP54136 660 aaKnown RBP23.28■■□□□ 1.32
SEMA4B-215ENST00000560089 TRERF1Q96PN7 1200 aa23.28■■□□□ 1.32
SEMA4B-215ENST00000560089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.27■■□□□ 1.32
SEMA4B-215ENST00000560089 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.32
SEMA4B-215ENST00000560089 RIMS1Q86UR5 1692 aaKnown RBP23.27■■□□□ 1.32
SEMA4B-215ENST00000560089 TXNDC2Q86VQ3 553 aa23.27■■□□□ 1.32
SEMA4B-215ENST00000560089 PTPRMP28827 1452 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 SLC26A8Q96RN1 970 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 CABP2Q9NPB3 220 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 UBR1Q8IWV7 1749 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 QRICH2Q9H0J4 1663 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 NCBP1Q09161 790 aaKnown RBP23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 CHMP4CQ96CF2 233 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 NPC1L1Q9UHC9 1359 aa23.26■■□□□ 1.31
SEMA4B-215ENST00000560089 CYP2E1P05181 493 aaPredicted RBP23.25■■□□□ 1.31
SEMA4B-215ENST00000560089 METP08581 1390 aa23.25■■□□□ 1.31
SEMA4B-215ENST00000560089 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
SEMA4B-215ENST00000560089 MORC2Q9Y6X9 1032 aaPredicted RBP23.25■■□□□ 1.31
SEMA4B-215ENST00000560089 PKP1Q13835 747 aa23.24■■□□□ 1.31
SEMA4B-215ENST00000560089 NSFL1CQ9UNZ2 370 aaKnown RBP23.24■■□□□ 1.31
SEMA4B-215ENST00000560089 SLC12A5Q9H2X9 1139 aa23.24■■□□□ 1.31
SEMA4B-215ENST00000560089 MMP14P50281 582 aa23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 YY1AP1Q9H869 796 aa23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 HDAC5Q9UQL6 1122 aa23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 ARHGEF28Q8N1W1 1705 aaKnown RBP23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 FEZ2Q9UHY8 353 aaPredicted RBP23.23■■□□□ 1.31
SEMA4B-215ENST00000560089 KNSTRNQ9Y448 316 aa23.22■■□□□ 1.31
SEMA4B-215ENST00000560089 TNNT3P45378 269 aaPredicted RBP23.22■■□□□ 1.31
SEMA4B-215ENST00000560089 MVPQ14764 893 aaKnown RBP23.22■■□□□ 1.31
SEMA4B-215ENST00000560089 KRT222Q8N1A0 295 aa23.21■■□□□ 1.31
SEMA4B-215ENST00000560089 SOX12O15370 315 aa23.21■■□□□ 1.31
SEMA4B-215ENST00000560089 GEMIN8Q9NWZ8 242 aaKnown RBP23.21■■□□□ 1.31
SEMA4B-215ENST00000560089 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
SEMA4B-215ENST00000560089 MYO3AQ8NEV4 1616 aa23.2■■□□□ 1.3
SEMA4B-215ENST00000560089 MBD3O95983 291 aa23.2■■□□□ 1.3
SEMA4B-215ENST00000560089 SRPK2P78362 688 aaKnown RBP23.2■■□□□ 1.3
SEMA4B-215ENST00000560089 EFCC1Q9HA90 598 aa23.2■■□□□ 1.3
SEMA4B-215ENST00000560089 USP25Q9UHP3 1055 aa23.2■■□□□ 1.3
SEMA4B-215ENST00000560089 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
SEMA4B-215ENST00000560089 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
SEMA4B-215ENST00000560089 KIF18AQ8NI77 898 aa23.18■■□□□ 1.3
SEMA4B-215ENST00000560089 MYOM1P52179 1685 aa23.18■■□□□ 1.3
SEMA4B-215ENST00000560089 HDAC1Q13547 482 aaPredicted RBP23.18■■□□□ 1.3
SEMA4B-215ENST00000560089 SYCP1Q15431 976 aa23.18■■□□□ 1.3
SEMA4B-215ENST00000560089 CARD14Q9BXL6 1004 aa23.18■■□□□ 1.3
SEMA4B-215ENST00000560089 ADCY5O95622 1261 aa23.17■■□□□ 1.3
SEMA4B-215ENST00000560089 APPP05067 770 aa23.17■■□□□ 1.3
SEMA4B-215ENST00000560089 EID1Q9Y6B2 187 aa23.17■■□□□ 1.3
SEMA4B-215ENST00000560089 PSEN1P49768 467 aa23.16■■□□□ 1.3
SEMA4B-215ENST00000560089 WWC1Q8IX03 1113 aa23.16■■□□□ 1.3
SEMA4B-215ENST00000560089 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
SEMA4B-215ENST00000560089 SBNO2Q9Y2G9 1366 aa23.16■■□□□ 1.3
SEMA4B-215ENST00000560089 KIAA1524Q8TCG1 905 aa23.15■■□□□ 1.3
SEMA4B-215ENST00000560089 TULP4Q9NRJ4 1543 aa23.15■■□□□ 1.3
SEMA4B-215ENST00000560089 CLGNO14967 610 aa23.15■■□□□ 1.3
SEMA4B-215ENST00000560089 UVSSAQ2YD98 709 aa23.15■■□□□ 1.3
SEMA4B-215ENST00000560089 CHAMP1Q96JM3 812 aa23.15■■□□□ 1.3
SEMA4B-215ENST00000560089 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.3
SEMA4B-215ENST00000560089 CWC22Q9HCG8 908 aaKnown RBP23.14■■□□□ 1.29
SEMA4B-215ENST00000560089 SYAP1Q96A49 352 aaPredicted RBP23.13■■□□□ 1.29
SEMA4B-215ENST00000560089 FAM184AQ8NB25 1140 aa23.13■■□□□ 1.29
SEMA4B-215ENST00000560089 SETD1AO15047 1707 aaKnown RBP23.12■■□□□ 1.29
SEMA4B-215ENST00000560089 LNPKQ9C0E8 428 aa23.12■■□□□ 1.29
SEMA4B-215ENST00000560089 PYCARDQ9ULZ3 195 aa23.12■■□□□ 1.29
SEMA4B-215ENST00000560089 MYCNP04198 464 aaPredicted RBP23.11■■□□□ 1.29
SEMA4B-215ENST00000560089 HNRNPH2P55795 449 aaKnown RBP23.11■■□□□ 1.29
SEMA4B-215ENST00000560089 FAM193AP78312 1265 aa23.11■■□□□ 1.29
SEMA4B-215ENST00000560089 RAD51AP2Q09MP3 1159 aa23.11■■□□□ 1.29
SEMA4B-215ENST00000560089 BMP2KLQ5H9B9 411 aa23.11■■□□□ 1.29
SEMA4B-215ENST00000560089 ADAMTS13Q76LX8 1427 aa23.11■■□□□ 1.29
SEMA4B-215ENST00000560089 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
SEMA4B-215ENST00000560089 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
SEMA4B-215ENST00000560089 RSPH14Q9UHP6 348 aa23.1■■□□□ 1.29
SEMA4B-215ENST00000560089 DZIP1LQ8IYY4 767 aaKnown RBP23.1■■□□□ 1.29
SEMA4B-215ENST00000560089 ZDHHC9Q9Y397 364 aa23.1■■□□□ 1.29
SEMA4B-215ENST00000560089 RABEP1Q15276 862 aa23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 LOC102724159A0A0B4J2E5 919 aa23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 PHF14O94880 888 aa23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 PWP2Q15269 919 aaKnown RBP23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 CREBRFQ8IUR6 639 aa23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 NUTM2FA1L443 756 aa23.09■■□□□ 1.29
SEMA4B-215ENST00000560089 NAA30Q147X3 362 aaPredicted RBP23.08■■□□□ 1.29
SEMA4B-215ENST00000560089 ZKSCAN2Q63HK3 967 aa23.08■■□□□ 1.29
SEMA4B-215ENST00000560089 NUCB1Q02818 461 aa23.07■■□□□ 1.28
SEMA4B-215ENST00000560089 FOXD4L5Q5VV16 416 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms