RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 APBA3O96018 575 aa18.46■□□□□ 0.55
CHRNB4-204ENST00000559849 IL13P35225 146 aa18.46■□□□□ 0.55
CHRNB4-204ENST00000559849 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
CHRNB4-204ENST00000559849 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
CHRNB4-204ENST00000559849 TNS1Q9HBL0 1735 aaKnown RBP18.44■□□□□ 0.54
CHRNB4-204ENST00000559849 EN1Q05925 392 aaPredicted RBP18.43■□□□□ 0.54
CHRNB4-204ENST00000559849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.43■□□□□ 0.54
CHRNB4-204ENST00000559849 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
CHRNB4-204ENST00000559849 SPG7Q9UQ90 795 aa18.43■□□□□ 0.54
CHRNB4-204ENST00000559849 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
CHRNB4-204ENST00000559849 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
CHRNB4-204ENST00000559849 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
CHRNB4-204ENST00000559849 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
CHRNB4-204ENST00000559849 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
CHRNB4-204ENST00000559849 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
CHRNB4-204ENST00000559849 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
CHRNB4-204ENST00000559849 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
CHRNB4-204ENST00000559849 KCNQ2O43526 872 aa18.4■□□□□ 0.54
CHRNB4-204ENST00000559849 PTF1AQ7RTS3 328 aa18.4■□□□□ 0.54
CHRNB4-204ENST00000559849 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
CHRNB4-204ENST00000559849 PARD3Q8TEW0 1356 aa18.4■□□□□ 0.54
CHRNB4-204ENST00000559849 PLSCR1O15162 318 aa18.4■□□□□ 0.54
CHRNB4-204ENST00000559849 CYP27B1O15528 508 aa18.39■□□□□ 0.53
CHRNB4-204ENST00000559849 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
CHRNB4-204ENST00000559849 PKD1L3Q7Z443 1732 aa18.39■□□□□ 0.53
CHRNB4-204ENST00000559849 KDRP35968 1356 aa18.39■□□□□ 0.53
CHRNB4-204ENST00000559849 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
CHRNB4-204ENST00000559849 RALBP1Q15311 655 aa18.38■□□□□ 0.53
CHRNB4-204ENST00000559849 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
CHRNB4-204ENST00000559849 NHSQ6T4R5 1651 aa18.37■□□□□ 0.53
CHRNB4-204ENST00000559849 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
CHRNB4-204ENST00000559849 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
CHRNB4-204ENST00000559849 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
CHRNB4-204ENST00000559849 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
CHRNB4-204ENST00000559849 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
CHRNB4-204ENST00000559849 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
CHRNB4-204ENST00000559849 HMOX1P09601 288 aa18.35■□□□□ 0.53
CHRNB4-204ENST00000559849 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
CHRNB4-204ENST00000559849 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
CHRNB4-204ENST00000559849 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
CHRNB4-204ENST00000559849 PHKG2P15735 406 aa18.34■□□□□ 0.53
CHRNB4-204ENST00000559849 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
CHRNB4-204ENST00000559849 BTAF1O14981 1849 aa18.32■□□□□ 0.52
CHRNB4-204ENST00000559849 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
CHRNB4-204ENST00000559849 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
CHRNB4-204ENST00000559849 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
CHRNB4-204ENST00000559849 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
CHRNB4-204ENST00000559849 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
CHRNB4-204ENST00000559849 PROM2Q8N271 834 aa18.3■□□□□ 0.52
CHRNB4-204ENST00000559849 TXNRD1Q16881 649 aa18.29■□□□□ 0.52
CHRNB4-204ENST00000559849 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
CHRNB4-204ENST00000559849 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
CHRNB4-204ENST00000559849 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHRNB4-204ENST00000559849 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
CHRNB4-204ENST00000559849 RREB1Q92766 1687 aa18.28■□□□□ 0.52
CHRNB4-204ENST00000559849 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
CHRNB4-204ENST00000559849 PRKRIP1Q9H875 184 aaPredicted RBP18.28■□□□□ 0.52
CHRNB4-204ENST00000559849 NBPF14Q5TI25 921 aa18.27■□□□□ 0.52
CHRNB4-204ENST00000559849 ITGB4P16144 1822 aa18.27■□□□□ 0.51
CHRNB4-204ENST00000559849 FCHSD2O94868 740 aa18.26■□□□□ 0.51
CHRNB4-204ENST00000559849 AKAP4Q5JQC9 854 aa18.26■□□□□ 0.51
CHRNB4-204ENST00000559849 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
CHRNB4-204ENST00000559849 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
CHRNB4-204ENST00000559849 PIGBQ92521 554 aa18.25■□□□□ 0.51
CHRNB4-204ENST00000559849 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
CHRNB4-204ENST00000559849 TMOD3Q9NYL9 352 aa18.25■□□□□ 0.51
CHRNB4-204ENST00000559849 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
CHRNB4-204ENST00000559849 TOGARAM1Q9Y4F4 1720 aa18.25■□□□□ 0.51
CHRNB4-204ENST00000559849 PRKAR2BP31323 418 aa18.24■□□□□ 0.51
CHRNB4-204ENST00000559849 SLC27A3Q5K4L6 730 aa18.24■□□□□ 0.51
CHRNB4-204ENST00000559849 R3HDM1Q15032 1099 aaKnown RBP18.22■□□□□ 0.51
CHRNB4-204ENST00000559849 SMARCC1Q92922 1105 aaPredicted RBP18.22■□□□□ 0.51
CHRNB4-204ENST00000559849 GAS2L2Q8NHY3 880 aa18.22■□□□□ 0.51
CHRNB4-204ENST00000559849 PSDA5PKW4 1024 aaPredicted RBP18.21■□□□□ 0.51
CHRNB4-204ENST00000559849 CABP4P57796 275 aa18.21■□□□□ 0.51
CHRNB4-204ENST00000559849 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
CHRNB4-204ENST00000559849 SRCAPQ6ZRS2 3230 aa18.21■□□□□ 0.51
CHRNB4-204ENST00000559849 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
CHRNB4-204ENST00000559849 LRRC4BQ9NT99 713 aa18.21■□□□□ 0.51
CHRNB4-204ENST00000559849 LY75O60449 1722 aa18.2■□□□□ 0.5
CHRNB4-204ENST00000559849 NEFMP07197 916 aa18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
CHRNB4-204ENST00000559849 SCN11AQ9UI33 1791 aa18.18■□□□□ 0.5
CHRNB4-204ENST00000559849 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
CHRNB4-204ENST00000559849 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
CHRNB4-204ENST00000559849 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
CHRNB4-204ENST00000559849 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
CHRNB4-204ENST00000559849 STK32BQ9NY57 414 aa18.18■□□□□ 0.5
CHRNB4-204ENST00000559849 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
CHRNB4-204ENST00000559849 KCNQ4P56696 695 aa18.16■□□□□ 0.5
CHRNB4-204ENST00000559849 ATG3Q9NT62 314 aa18.16■□□□□ 0.5
CHRNB4-204ENST00000559849 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
CHRNB4-204ENST00000559849 ANP32CO43423 234 aa18.16■□□□□ 0.5
CHRNB4-204ENST00000559849 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
CHRNB4-204ENST00000559849 VIRMAQ69YN4 1812 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms