RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 AMPHP49418 695 aa23.46■■□□□ 1.35
PDE8A-211ENST00000559742 ARHGAP23Q9P227 1491 aa23.46■■□□□ 1.35
PDE8A-211ENST00000559742 NLRP6P59044 892 aa23.46■■□□□ 1.35
PDE8A-211ENST00000559742 C14orf37Q86TY3 774 aa23.46■■□□□ 1.35
PDE8A-211ENST00000559742 DIP2AQ14689 1571 aa23.45■■□□□ 1.34
PDE8A-211ENST00000559742 RIMS1Q86UR5 1692 aaKnown RBP23.45■■□□□ 1.34
PDE8A-211ENST00000559742 MFAP1P55081 439 aaKnown RBP23.45■■□□□ 1.34
PDE8A-211ENST00000559742 BRPF1P55201 1214 aaPredicted RBP23.45■■□□□ 1.34
PDE8A-211ENST00000559742 ESPNB1AK53 854 aa23.44■■□□□ 1.34
PDE8A-211ENST00000559742 SSH2Q76I76 1423 aa23.43■■□□□ 1.34
PDE8A-211ENST00000559742 TBC1D32Q96NH3 1257 aa23.43■■□□□ 1.34
PDE8A-211ENST00000559742 USP31Q70CQ4 1352 aa23.43■■□□□ 1.34
PDE8A-211ENST00000559742 ERBB4Q15303 1308 aa23.42■■□□□ 1.34
PDE8A-211ENST00000559742 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
PDE8A-211ENST00000559742 PLEKHG5O94827 1062 aa23.42■■□□□ 1.34
PDE8A-211ENST00000559742 ANKRD45Q5TZF3 282 aa23.42■■□□□ 1.34
PDE8A-211ENST00000559742 PTCH1Q13635 1447 aa23.42■■□□□ 1.34
PDE8A-211ENST00000559742 MTHFSDQ2M296 383 aaKnown RBP23.42■■□□□ 1.34
PDE8A-211ENST00000559742 ARHGAP45Q92619 1136 aa23.42■■□□□ 1.34
PDE8A-211ENST00000559742 LTV1Q96GA3 475 aaPredicted RBP23.42■■□□□ 1.34
PDE8A-211ENST00000559742 TRAK2O60296 914 aa23.41■■□□□ 1.34
PDE8A-211ENST00000559742 ABCC4O15439 1325 aa23.4■■□□□ 1.34
PDE8A-211ENST00000559742 NUCB1Q02818 461 aa23.4■■□□□ 1.34
PDE8A-211ENST00000559742 TTC21AQ8NDW8 1320 aa23.4■■□□□ 1.34
PDE8A-211ENST00000559742 CHD1LQ86WJ1 897 aa23.4■■□□□ 1.34
PDE8A-211ENST00000559742 SIRT2Q8IXJ6 389 aa23.4■■□□□ 1.34
PDE8A-211ENST00000559742 EYA1Q99502 592 aa23.4■■□□□ 1.34
PDE8A-211ENST00000559742 GRPEL1Q9HAV7 217 aa23.39■■□□□ 1.34
PDE8A-211ENST00000559742 ABTB2Q8N961 1025 aa23.39■■□□□ 1.33
PDE8A-211ENST00000559742 CHL1O00533 1208 aa23.38■■□□□ 1.33
PDE8A-211ENST00000559742 FLT4P35916 1363 aa23.38■■□□□ 1.33
PDE8A-211ENST00000559742 SPRYD3Q8NCJ5 442 aa23.38■■□□□ 1.33
PDE8A-211ENST00000559742 TPM2P07951 284 aa23.37■■□□□ 1.33
PDE8A-211ENST00000559742 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
PDE8A-211ENST00000559742 RTF1Q92541 710 aaKnown RBP23.37■■□□□ 1.33
PDE8A-211ENST00000559742 API5Q9BZZ5 524 aaKnown RBP23.37■■□□□ 1.33
PDE8A-211ENST00000559742 SBNO1A3KN83 1393 aa23.36■■□□□ 1.33
PDE8A-211ENST00000559742 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
PDE8A-211ENST00000559742 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
PDE8A-211ENST00000559742 PIK3R4Q99570 1358 aa23.36■■□□□ 1.33
PDE8A-211ENST00000559742 RGPD1P0DJD0 1748 aa23.35■■□□□ 1.33
PDE8A-211ENST00000559742 PDCL3Q9H2J4 239 aa23.35■■□□□ 1.33
PDE8A-211ENST00000559742 CEP170BQ9Y4F5 1589 aaPredicted RBP23.35■■□□□ 1.33
PDE8A-211ENST00000559742 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
PDE8A-211ENST00000559742 C22orf23Q9BZE7 217 aa23.34■■□□□ 1.33
PDE8A-211ENST00000559742 CHMP5Q9NZZ3 219 aa23.34■■□□□ 1.33
PDE8A-211ENST00000559742 TSPYL4Q9UJ04 414 aa23.34■■□□□ 1.33
PDE8A-211ENST00000559742 ISY1Q9ULR0 285 aaKnown RBP23.33■■□□□ 1.33
PDE8A-211ENST00000559742 SLC4A2P04920 1241 aa23.33■■□□□ 1.32
PDE8A-211ENST00000559742 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.32
PDE8A-211ENST00000559742 XRN1Q8IZH2 1706 aaKnown RBP23.32■■□□□ 1.32
PDE8A-211ENST00000559742 ARHGEF10O15013 1369 aa23.32■■□□□ 1.32
PDE8A-211ENST00000559742 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
PDE8A-211ENST00000559742 CHMP4BQ9H444 224 aaKnown RBP23.31■■□□□ 1.32
PDE8A-211ENST00000559742 CRB1P82279 1406 aa23.3■■□□□ 1.32
PDE8A-211ENST00000559742 APBB1O00213 710 aa23.3■■□□□ 1.32
PDE8A-211ENST00000559742 HOXC9P31274 260 aa23.3■■□□□ 1.32
PDE8A-211ENST00000559742 GCC1Q96CN9 775 aa23.3■■□□□ 1.32
PDE8A-211ENST00000559742 TRIM44Q96DX7 344 aaPredicted RBP23.3■■□□□ 1.32
PDE8A-211ENST00000559742 SLC4A10Q6U841 1118 aa23.29■■□□□ 1.32
PDE8A-211ENST00000559742 IGSF1Q8N6C5 1336 aa23.29■■□□□ 1.32
PDE8A-211ENST00000559742 F6X3S4 739 aa23.28■■□□□ 1.32
PDE8A-211ENST00000559742 G2E3Q7L622 706 aa23.28■■□□□ 1.32
PDE8A-211ENST00000559742 PODXL2Q9NZ53 605 aa23.28■■□□□ 1.32
PDE8A-211ENST00000559742 MSH6P52701 1360 aa23.27■■□□□ 1.32
PDE8A-211ENST00000559742 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
PDE8A-211ENST00000559742 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
PDE8A-211ENST00000559742 RGS12O14924 1447 aa23.26■■□□□ 1.31
PDE8A-211ENST00000559742 ESCO1Q5FWF5 840 aa23.26■■□□□ 1.31
PDE8A-211ENST00000559742 MEIS3Q99687 375 aa23.26■■□□□ 1.31
PDE8A-211ENST00000559742 PHF8Q9UPP1 1060 aa23.26■■□□□ 1.31
PDE8A-211ENST00000559742 KDRP35968 1356 aa23.26■■□□□ 1.31
PDE8A-211ENST00000559742 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
PDE8A-211ENST00000559742 INTS3Q68E01 1043 aaKnown RBP23.25■■□□□ 1.31
PDE8A-211ENST00000559742 GAS2L2Q8NHY3 880 aa23.24■■□□□ 1.31
PDE8A-211ENST00000559742 KIAA0232Q92628 1395 aa23.24■■□□□ 1.31
PDE8A-211ENST00000559742 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
PDE8A-211ENST00000559742 HAP1P54257 671 aaPredicted RBP23.23■■□□□ 1.31
PDE8A-211ENST00000559742 ANKARQ7Z5J8 1434 aa23.23■■□□□ 1.31
PDE8A-211ENST00000559742 KIAA1211Q6ZU35 1233 aa23.22■■□□□ 1.31
PDE8A-211ENST00000559742 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
PDE8A-211ENST00000559742 BMP2KLQ5H9B9 411 aa23.22■■□□□ 1.31
PDE8A-211ENST00000559742 GNAT3A8MTJ3 354 aa23.21■■□□□ 1.31
PDE8A-211ENST00000559742 PSME1Q06323 249 aa23.21■■□□□ 1.31
PDE8A-211ENST00000559742 LMOD2Q6P5Q4 547 aa23.2■■□□□ 1.3
PDE8A-211ENST00000559742 SMARCA5O60264 1052 aaPredicted RBP23.2■■□□□ 1.3
PDE8A-211ENST00000559742 GAS2L3Q86XJ1 694 aa23.2■■□□□ 1.3
PDE8A-211ENST00000559742 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
PDE8A-211ENST00000559742 OTUD7AQ8TE49 926 aaPredicted RBP23.19■■□□□ 1.3
PDE8A-211ENST00000559742 PTPRCP08575 1304 aa23.19■■□□□ 1.3
PDE8A-211ENST00000559742 CEP85Q6P2H3 762 aa23.19■■□□□ 1.3
PDE8A-211ENST00000559742 TBC1D9Q6ZT07 1266 aa23.18■■□□□ 1.3
PDE8A-211ENST00000559742 DCTPP1Q9H773 170 aa23.18■■□□□ 1.3
PDE8A-211ENST00000559742 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
PDE8A-211ENST00000559742 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
PDE8A-211ENST00000559742 PRDM4Q9UKN5 801 aa23.17■■□□□ 1.3
PDE8A-211ENST00000559742 RTL1A6NKG5 1358 aa23.17■■□□□ 1.3
PDE8A-211ENST00000559742 ANKRD44Q8N8A2 993 aa23.17■■□□□ 1.3
PDE8A-211ENST00000559742 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
PDE8A-211ENST00000559742 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms