RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 ZCRB1Q8TBF4 217 aaKnown RBP26.38■■□□□ 1.81
SHF-205ENST00000559566 DDX54Q8TDD1 881 aaKnown RBP26.38■■□□□ 1.81
SHF-205ENST00000559566 BCL9O00512 1426 aa26.38■■□□□ 1.81
SHF-205ENST00000559566 CCDC125Q86Z20 511 aa26.37■■□□□ 1.81
SHF-205ENST00000559566 TNS1Q9HBL0 1735 aaKnown RBP26.36■■□□□ 1.81
SHF-205ENST00000559566 DIAPH1O60610 1272 aaKnown RBP26.34■■□□□ 1.81
SHF-205ENST00000559566 SULT6B1Q6IMI4 303 aa26.33■■□□□ 1.81
SHF-205ENST00000559566 ACSBG1Q96GR2 724 aa26.32■■□□□ 1.8
SHF-205ENST00000559566 KDRP35968 1356 aa26.32■■□□□ 1.8
SHF-205ENST00000559566 PKD1L3Q7Z443 1732 aa26.31■■□□□ 1.8
SHF-205ENST00000559566 CYP27B1O15528 508 aa26.31■■□□□ 1.8
SHF-205ENST00000559566 KCNQ2O43526 872 aa26.31■■□□□ 1.8
SHF-205ENST00000559566 SBF2Q86WG5 1849 aa26.3■■□□□ 1.8
SHF-205ENST00000559566 HMOX1P09601 288 aa26.29■■□□□ 1.8
SHF-205ENST00000559566 SF3B2Q13435 895 aaKnown RBP26.29■■□□□ 1.8
SHF-205ENST00000559566 EN1Q05925 392 aaPredicted RBP26.28■■□□□ 1.8
SHF-205ENST00000559566 APBA3O96018 575 aa26.27■■□□□ 1.8
SHF-205ENST00000559566 PCDH11XQ9BZA7 1347 aa26.27■■□□□ 1.8
SHF-205ENST00000559566 PCDH11YQ9BZA8 1340 aa26.27■■□□□ 1.8
SHF-205ENST00000559566 RALBP1Q15311 655 aa26.26■■□□□ 1.79
SHF-205ENST00000559566 BCL11BQ9C0K0 894 aaPredicted RBP26.26■■□□□ 1.79
SHF-205ENST00000559566 BAG6P46379 1132 aa26.25■■□□□ 1.79
SHF-205ENST00000559566 CFAP53Q96M91 514 aa26.25■■□□□ 1.79
SHF-205ENST00000559566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.25■■□□□ 1.79
SHF-205ENST00000559566 NHSQ6T4R5 1651 aa26.25■■□□□ 1.79
SHF-205ENST00000559566 U2SURPO15042 1029 aaKnown RBP26.24■■□□□ 1.79
SHF-205ENST00000559566 EZH2Q15910 746 aaKnown RBP26.24■■□□□ 1.79
SHF-205ENST00000559566 SPG7Q9UQ90 795 aa26.24■■□□□ 1.79
SHF-205ENST00000559566 CAMKK2Q96RR4 588 aa26.23■■□□□ 1.79
SHF-205ENST00000559566 PHKG2P15735 406 aa26.22■■□□□ 1.79
SHF-205ENST00000559566 PRKRIP1Q9H875 184 aaPredicted RBP26.22■■□□□ 1.79
SHF-205ENST00000559566 PLEKHG2Q9H7P9 1386 aa26.21■■□□□ 1.79
SHF-205ENST00000559566 PRIM1P49642 420 aaKnown RBP26.21■■□□□ 1.79
SHF-205ENST00000559566 DOT1LQ8TEK3 1739 aa26.21■■□□□ 1.79
SHF-205ENST00000559566 MYBBP1AQ9BQG0 1328 aaKnown RBP26.19■■□□□ 1.78
SHF-205ENST00000559566 NKX1-1Q15270 411 aaPredicted RBP26.19■■□□□ 1.78
SHF-205ENST00000559566 PLEKHO1Q53GL0 409 aaPredicted RBP26.19■■□□□ 1.78
SHF-205ENST00000559566 TOGARAM1Q9Y4F4 1720 aa26.19■■□□□ 1.78
SHF-205ENST00000559566 ZNF530Q6P9A1 599 aaPredicted RBP26.17■■□□□ 1.78
SHF-205ENST00000559566 IFNL2Q8IZJ0 200 aa26.17■■□□□ 1.78
SHF-205ENST00000559566 AMOTQ4VCS5 1084 aa26.16■■□□□ 1.78
SHF-205ENST00000559566 SYTL4Q96C24 671 aaPredicted RBP26.16■■□□□ 1.78
SHF-205ENST00000559566 RSPH6AQ9H0K4 717 aa26.16■■□□□ 1.78
SHF-205ENST00000559566 PLSCR1O15162 318 aa26.14■■□□□ 1.78
SHF-205ENST00000559566 U2AF1L5P0DN76 240 aaPredicted RBP26.14■■□□□ 1.78
SHF-205ENST00000559566 U2AF1Q01081 240 aaKnown RBP eCLIP26.14■■□□□ 1.78
SHF-205ENST00000559566 MTHFSDQ2M296 383 aaKnown RBP26.14■■□□□ 1.78
SHF-205ENST00000559566 PROM2Q8N271 834 aa26.14■■□□□ 1.78
SHF-205ENST00000559566 NUDCQ9Y266 331 aa26.14■■□□□ 1.78
SHF-205ENST00000559566 BTAF1O14981 1849 aa26.14■■□□□ 1.77
SHF-205ENST00000559566 KDM6AO15550 1401 aaPredicted RBP26.14■■□□□ 1.77
SHF-205ENST00000559566 PRKAR2BP31323 418 aa26.12■■□□□ 1.77
SHF-205ENST00000559566 RREB1Q92766 1687 aa26.12■■□□□ 1.77
SHF-205ENST00000559566 PHACTR3Q96KR7 559 aa26.11■■□□□ 1.77
SHF-205ENST00000559566 RGPD3A6NKT7 1758 aaPredicted RBP26.08■■□□□ 1.77
SHF-205ENST00000559566 RGPD4Q7Z3J3 1758 aa26.08■■□□□ 1.77
SHF-205ENST00000559566 MPRIPQ6WCQ1 1025 aa26.08■■□□□ 1.77
SHF-205ENST00000559566 NUP188Q5SRE5 1749 aa26.08■■□□□ 1.76
SHF-205ENST00000559566 TXNRD1Q16881 649 aa26.07■■□□□ 1.76
SHF-205ENST00000559566 C1orf141Q5JVX7 400 aa26.07■■□□□ 1.76
SHF-205ENST00000559566 PIGBQ92521 554 aa26.07■■□□□ 1.76
SHF-205ENST00000559566 AKAP4Q5JQC9 854 aa26.06■■□□□ 1.76
SHF-205ENST00000559566 DCAF5Q96JK2 942 aa26.06■■□□□ 1.76
SHF-205ENST00000559566 FCHSD2O94868 740 aa26.05■■□□□ 1.76
SHF-205ENST00000559566 CCDC184Q52MB2 194 aa26.05■■□□□ 1.76
SHF-205ENST00000559566 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
SHF-205ENST00000559566 LGR6Q9HBX8 967 aa26.04■■□□□ 1.76
SHF-205ENST00000559566 LRRC4BQ9NT99 713 aa26.04■■□□□ 1.76
SHF-205ENST00000559566 ITGB4P16144 1822 aa26.04■■□□□ 1.76
SHF-205ENST00000559566 KCNQ4P56696 695 aa26.03■■□□□ 1.76
SHF-205ENST00000559566 ANO8Q9HCE9 1232 aaPredicted RBP26.03■■□□□ 1.76
SHF-205ENST00000559566 PLEKHF1Q96S99 279 aa26.02■■□□□ 1.76
SHF-205ENST00000559566 TMOD3Q9NYL9 352 aa26.02■■□□□ 1.76
SHF-205ENST00000559566 KAT6BQ8WYB5 2073 aa26■■□□□ 1.75
SHF-205ENST00000559566 ERVV-2B6SEH9 535 aa26■■□□□ 1.75
SHF-205ENST00000559566 RNMTO43148 476 aaKnown RBP26■■□□□ 1.75
SHF-205ENST00000559566 GAS2L2Q8NHY3 880 aa26■■□□□ 1.75
SHF-205ENST00000559566 PSDA5PKW4 1024 aaPredicted RBP25.99■■□□□ 1.75
SHF-205ENST00000559566 ASAP1Q9ULH1 1129 aa25.99■■□□□ 1.75
SHF-205ENST00000559566 ADAMTS7Q9UKP4 1686 aa25.99■■□□□ 1.75
SHF-205ENST00000559566 PALLDQ8WX93 1383 aa25.98■■□□□ 1.75
SHF-205ENST00000559566 MAP3K5Q99683 1374 aa25.98■■□□□ 1.75
SHF-205ENST00000559566 LY75O60449 1722 aa25.97■■□□□ 1.75
SHF-205ENST00000559566 PAPPAQ13219 1627 aa25.97■■□□□ 1.75
SHF-205ENST00000559566 ANP32CO43423 234 aa25.97■■□□□ 1.75
SHF-205ENST00000559566 CABP4P57796 275 aa25.97■■□□□ 1.75
SHF-205ENST00000559566 ATG3Q9NT62 314 aa25.97■■□□□ 1.75
SHF-205ENST00000559566 R3HDM1Q15032 1099 aaKnown RBP25.96■■□□□ 1.75
SHF-205ENST00000559566 NFATC2IPQ8NCF5 419 aa25.96■■□□□ 1.75
SHF-205ENST00000559566 IL17REQ8NFR9 667 aa25.96■■□□□ 1.75
SHF-205ENST00000559566 SCN11AQ9UI33 1791 aa25.96■■□□□ 1.75
SHF-205ENST00000559566 MRC1P22897 1456 aa25.96■■□□□ 1.75
SHF-205ENST00000559566 GNAT3A8MTJ3 354 aa25.94■■□□□ 1.74
SHF-205ENST00000559566 ZNF827Q17R98 1081 aa25.93■■□□□ 1.74
SHF-205ENST00000559566 SLC52A2Q9HAB3 445 aa25.93■■□□□ 1.74
SHF-205ENST00000559566 CCNL1Q9UK58 526 aaPredicted RBP25.93■■□□□ 1.74
SHF-205ENST00000559566 ADAMTS8Q9UP79 889 aa25.93■■□□□ 1.74
SHF-205ENST00000559566 SLC27A3Q5K4L6 730 aa25.92■■□□□ 1.74
SHF-205ENST00000559566 CCDC146Q8IYE0 955 aa25.91■■□□□ 1.74
SHF-205ENST00000559566 SMARCC1Q92922 1105 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms