RNA–Protein interactions for RNA: ENST00000559083.1

KNSTRN-205, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 405 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-205ENST00000559083 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
KNSTRN-205ENST00000559083 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
KNSTRN-205ENST00000559083 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
KNSTRN-205ENST00000559083 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
KNSTRN-205ENST00000559083 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
KNSTRN-205ENST00000559083 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
KNSTRN-205ENST00000559083 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
KNSTRN-205ENST00000559083 MEGF6O75095 1541 aa13.12□□□□□ -0.31
KNSTRN-205ENST00000559083 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
KNSTRN-205ENST00000559083 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
KNSTRN-205ENST00000559083 HMOX1P09601 288 aa13.11□□□□□ -0.31
KNSTRN-205ENST00000559083 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
KNSTRN-205ENST00000559083 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
KNSTRN-205ENST00000559083 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
KNSTRN-205ENST00000559083 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
KNSTRN-205ENST00000559083 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
KNSTRN-205ENST00000559083 A0A0G2JS52 829 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 MYT1Q01538 1121 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
KNSTRN-205ENST00000559083 BCL9O00512 1426 aa13.09□□□□□ -0.31
KNSTRN-205ENST00000559083 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
KNSTRN-205ENST00000559083 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
KNSTRN-205ENST00000559083 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
KNSTRN-205ENST00000559083 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
KNSTRN-205ENST00000559083 RGS12O14924 1447 aa13.08□□□□□ -0.32
KNSTRN-205ENST00000559083 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
KNSTRN-205ENST00000559083 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
KNSTRN-205ENST00000559083 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
KNSTRN-205ENST00000559083 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
KNSTRN-205ENST00000559083 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
KNSTRN-205ENST00000559083 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
KNSTRN-205ENST00000559083 PHKG2P15735 406 aa13.05□□□□□ -0.32
KNSTRN-205ENST00000559083 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
KNSTRN-205ENST00000559083 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
KNSTRN-205ENST00000559083 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
KNSTRN-205ENST00000559083 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
KNSTRN-205ENST00000559083 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 CYP27B1O15528 508 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
KNSTRN-205ENST00000559083 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
KNSTRN-205ENST00000559083 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
KNSTRN-205ENST00000559083 TMPOP42166 694 aaKnown RBP13.02□□□□□ -0.33
KNSTRN-205ENST00000559083 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
KNSTRN-205ENST00000559083 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
KNSTRN-205ENST00000559083 CCDC27Q2M243 656 aa13.01□□□□□ -0.33
KNSTRN-205ENST00000559083 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
KNSTRN-205ENST00000559083 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
KNSTRN-205ENST00000559083 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
KNSTRN-205ENST00000559083 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
KNSTRN-205ENST00000559083 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
KNSTRN-205ENST00000559083 APAF1O14727 1248 aa12.99□□□□□ -0.33
KNSTRN-205ENST00000559083 RIPK4P57078 832 aa12.99□□□□□ -0.33
KNSTRN-205ENST00000559083 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
KNSTRN-205ENST00000559083 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-205ENST00000559083 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
KNSTRN-205ENST00000559083 TEFQ10587 303 aa12.97□□□□□ -0.33
KNSTRN-205ENST00000559083 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
KNSTRN-205ENST00000559083 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
KNSTRN-205ENST00000559083 MRC1P22897 1456 aa12.97□□□□□ -0.33
KNSTRN-205ENST00000559083 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
KNSTRN-205ENST00000559083 CABP4P57796 275 aa12.96□□□□□ -0.33
KNSTRN-205ENST00000559083 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
KNSTRN-205ENST00000559083 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
KNSTRN-205ENST00000559083 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
KNSTRN-205ENST00000559083 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
KNSTRN-205ENST00000559083 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
KNSTRN-205ENST00000559083 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
KNSTRN-205ENST00000559083 IL16Q14005 1332 aa12.94□□□□□ -0.34
KNSTRN-205ENST00000559083 PRIM1P49642 420 aaKnown RBP12.94□□□□□ -0.34
KNSTRN-205ENST00000559083 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
KNSTRN-205ENST00000559083 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
KNSTRN-205ENST00000559083 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
KNSTRN-205ENST00000559083 TAF7Q15545 349 aaPredicted RBP12.93□□□□□ -0.34
KNSTRN-205ENST00000559083 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
KNSTRN-205ENST00000559083 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
KNSTRN-205ENST00000559083 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
KNSTRN-205ENST00000559083 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
KNSTRN-205ENST00000559083 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
KNSTRN-205ENST00000559083 DLG5Q8TDM6 1919 aa12.92□□□□□ -0.34
KNSTRN-205ENST00000559083 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
KNSTRN-205ENST00000559083 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
KNSTRN-205ENST00000559083 MCM10Q7L590 875 aa12.92□□□□□ -0.34
KNSTRN-205ENST00000559083 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
KNSTRN-205ENST00000559083 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
KNSTRN-205ENST00000559083 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
KNSTRN-205ENST00000559083 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
KNSTRN-205ENST00000559083 PLSCR1O15162 318 aa12.91□□□□□ -0.34
KNSTRN-205ENST00000559083 TRIM37O94972 964 aa12.91□□□□□ -0.34
KNSTRN-205ENST00000559083 GNAI1P63096 354 aa12.91□□□□□ -0.34
KNSTRN-205ENST00000559083 PIGBQ92521 554 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms