RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
CHRNA3-205ENST00000559080 ANKRD36BQ8N2N9 1353 aa15.89■□□□□ 0.13
CHRNA3-205ENST00000559080 CEP350Q5VT06 3117 aa15.89■□□□□ 0.13
CHRNA3-205ENST00000559080 EDC4Q6P2E9 1401 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-205ENST00000559080 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-205ENST00000559080 IP6K1Q92551 441 aa15.87■□□□□ 0.13
CHRNA3-205ENST00000559080 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
CHRNA3-205ENST00000559080 ITGB4P16144 1822 aa15.87■□□□□ 0.13
CHRNA3-205ENST00000559080 GRIN3BO60391 1043 aa15.86■□□□□ 0.13
CHRNA3-205ENST00000559080 COL23A1Q86Y22 540 aaPredicted RBP15.86■□□□□ 0.13
CHRNA3-205ENST00000559080 SYTL4Q96C24 671 aaPredicted RBP15.86■□□□□ 0.13
CHRNA3-205ENST00000559080 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
CHRNA3-205ENST00000559080 A0A1W2PP64 1363 aa15.86■□□□□ 0.13
CHRNA3-205ENST00000559080 MEGF6O75095 1541 aa15.85■□□□□ 0.13
CHRNA3-205ENST00000559080 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
CHRNA3-205ENST00000559080 ATP10DQ9P241 1426 aa15.85■□□□□ 0.13
CHRNA3-205ENST00000559080 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
CHRNA3-205ENST00000559080 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
CHRNA3-205ENST00000559080 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
CHRNA3-205ENST00000559080 LTV1Q96GA3 475 aaPredicted RBP15.83■□□□□ 0.12
CHRNA3-205ENST00000559080 CCNL1Q9UK58 526 aaPredicted RBP15.83■□□□□ 0.12
CHRNA3-205ENST00000559080 ADCY9O60503 1353 aa15.83■□□□□ 0.12
CHRNA3-205ENST00000559080 FBLN1P23142 703 aa15.81■□□□□ 0.12
CHRNA3-205ENST00000559080 HOXC9P31274 260 aa15.81■□□□□ 0.12
CHRNA3-205ENST00000559080 MAP3K19Q56UN5 1328 aa15.81■□□□□ 0.12
CHRNA3-205ENST00000559080 ZCRB1Q8TBF4 217 aaKnown RBP15.81■□□□□ 0.12
CHRNA3-205ENST00000559080 C4BP0C0L5 1744 aa15.8■□□□□ 0.12
CHRNA3-205ENST00000559080 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
CHRNA3-205ENST00000559080 MAP2P11137 1827 aaKnown RBP15.8■□□□□ 0.12
CHRNA3-205ENST00000559080 USP47Q96K76 1375 aa15.79■□□□□ 0.12
CHRNA3-205ENST00000559080 MSH5O43196 834 aa15.79■□□□□ 0.12
CHRNA3-205ENST00000559080 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
CHRNA3-205ENST00000559080 CD2APQ9Y5K6 639 aa15.78■□□□□ 0.12
CHRNA3-205ENST00000559080 HSPA6P17066 643 aa15.77■□□□□ 0.12
CHRNA3-205ENST00000559080 PUS7Q96PZ0 661 aaKnown RBP15.77■□□□□ 0.12
CHRNA3-205ENST00000559080 GPBP1L1Q9HC44 474 aaPredicted RBP15.77■□□□□ 0.12
CHRNA3-205ENST00000559080 KIF13BQ9NQT8 1826 aa15.76■□□□□ 0.11
CHRNA3-205ENST00000559080 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
CHRNA3-205ENST00000559080 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
CHRNA3-205ENST00000559080 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
CHRNA3-205ENST00000559080 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
CHRNA3-205ENST00000559080 PKD1L3Q7Z443 1732 aa15.75■□□□□ 0.11
CHRNA3-205ENST00000559080 KIAA1551Q9HCM1 1747 aa15.75■□□□□ 0.11
CHRNA3-205ENST00000559080 AMPHP49418 695 aa15.74■□□□□ 0.11
CHRNA3-205ENST00000559080 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
CHRNA3-205ENST00000559080 COG3Q96JB2 828 aa15.74■□□□□ 0.11
CHRNA3-205ENST00000559080 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
CHRNA3-205ENST00000559080 KIF20BQ96Q89 1820 aa15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 CGNL1Q0VF96 1302 aa15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 CICQ96RK0 1608 aaPredicted RBP15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 ZNF526Q8TF50 670 aaPredicted RBP15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 PALLDQ8WX93 1383 aa15.73■□□□□ 0.11
CHRNA3-205ENST00000559080 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
CHRNA3-205ENST00000559080 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
CHRNA3-205ENST00000559080 ST20-MTHFSA0A0A6YYL1 179 aa15.71■□□□□ 0.11
CHRNA3-205ENST00000559080 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
CHRNA3-205ENST00000559080 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.11
CHRNA3-205ENST00000559080 TESK2Q96S53 571 aa15.71■□□□□ 0.11
CHRNA3-205ENST00000559080 IGSF1Q8N6C5 1336 aa15.7■□□□□ 0.1
CHRNA3-205ENST00000559080 KIF3CO14782 793 aa15.7■□□□□ 0.1
CHRNA3-205ENST00000559080 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
CHRNA3-205ENST00000559080 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
CHRNA3-205ENST00000559080 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
CHRNA3-205ENST00000559080 RAPGEF4Q8WZA2 1011 aa15.69■□□□□ 0.1
CHRNA3-205ENST00000559080 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
CHRNA3-205ENST00000559080 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
CHRNA3-205ENST00000559080 CYP27B1O15528 508 aa15.68■□□□□ 0.1
CHRNA3-205ENST00000559080 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
CHRNA3-205ENST00000559080 FYB1O15117 783 aa15.67■□□□□ 0.1
CHRNA3-205ENST00000559080 TATP17735 454 aaPredicted RBP15.67■□□□□ 0.1
CHRNA3-205ENST00000559080 HMGB2P26583 209 aaKnown RBP15.67■□□□□ 0.1
CHRNA3-205ENST00000559080 ANKRD26Q9UPS8 1709 aa15.66■□□□□ 0.1
CHRNA3-205ENST00000559080 INSRP06213 1382 aa15.66■□□□□ 0.1
CHRNA3-205ENST00000559080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.66■□□□□ 0.1
CHRNA3-205ENST00000559080 HSP90AB2PQ58FF8 381 aa15.66■□□□□ 0.1
CHRNA3-205ENST00000559080 SMG6Q86US8 1419 aaKnown RBP15.66■□□□□ 0.1
CHRNA3-205ENST00000559080 WDR90Q96KV7 1748 aa15.65■□□□□ 0.1
CHRNA3-205ENST00000559080 PHF14O94880 888 aa15.65■□□□□ 0.1
CHRNA3-205ENST00000559080 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
CHRNA3-205ENST00000559080 AK7Q96M32 723 aa15.65■□□□□ 0.1
CHRNA3-205ENST00000559080 GGNBP2Q9H3C7 697 aa15.65■□□□□ 0.1
CHRNA3-205ENST00000559080 ARFGEF1Q9Y6D6 1849 aa15.65■□□□□ 0.1
CHRNA3-205ENST00000559080 TMF1P82094 1093 aa15.64■□□□□ 0.09
CHRNA3-205ENST00000559080 NCAPD2Q15021 1401 aa15.64■□□□□ 0.09
CHRNA3-205ENST00000559080 PIGBQ92521 554 aa15.64■□□□□ 0.09
CHRNA3-205ENST00000559080 SMARCC1Q92922 1105 aaPredicted RBP15.64■□□□□ 0.09
CHRNA3-205ENST00000559080 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
CHRNA3-205ENST00000559080 SSFA2P28290 1259 aa15.63■□□□□ 0.09
CHRNA3-205ENST00000559080 DNAJC5GQ8N7S2 189 aa15.63■□□□□ 0.09
CHRNA3-205ENST00000559080 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
CHRNA3-205ENST00000559080 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
CHRNA3-205ENST00000559080 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
CHRNA3-205ENST00000559080 COL5A3P25940 1745 aaPredicted RBP15.63■□□□□ 0.09
CHRNA3-205ENST00000559080 FLT4P35916 1363 aa15.62■□□□□ 0.09
CHRNA3-205ENST00000559080 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
CHRNA3-205ENST00000559080 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
CHRNA3-205ENST00000559080 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
CHRNA3-205ENST00000559080 SBF1O95248 1867 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms