RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 SPATA31E1Q6ZUB1 1445 aa9.09□□□□□ -0.95
MARK3-216ENST00000558953 SETD5Q9C0A6 1442 aa9.09□□□□□ -0.95
MARK3-216ENST00000558953 MEX3CQ5U5Q3 659 aaKnown RBP9.09□□□□□ -0.95
MARK3-216ENST00000558953 ANKRD30BQ9BXX2 1392 aa9.09□□□□□ -0.95
MARK3-216ENST00000558953 LRP6O75581 1613 aa9.09□□□□□ -0.95
MARK3-216ENST00000558953 SMAPO00193 183 aa9.08□□□□□ -0.96
MARK3-216ENST00000558953 APLP1P51693 650 aa9.08□□□□□ -0.96
MARK3-216ENST00000558953 RGL3Q3MIN7 710 aa9.08□□□□□ -0.96
MARK3-216ENST00000558953 LRRC59Q96AG4 307 aaKnown RBP9.08□□□□□ -0.96
MARK3-216ENST00000558953 ADGRF5Q8IZF2 1346 aa9.07□□□□□ -0.96
MARK3-216ENST00000558953 SLC19A1P41440 591 aa9.07□□□□□ -0.96
MARK3-216ENST00000558953 ZNF772Q68DY9 489 aaPredicted RBP9.07□□□□□ -0.96
MARK3-216ENST00000558953 C1orf167Q5SNV9 1468 aa9.07□□□□□ -0.96
MARK3-216ENST00000558953 LAMC1P11047 1609 aa9.06□□□□□ -0.96
MARK3-216ENST00000558953 NUTM2BA6NNL0 878 aaPredicted RBP9.06□□□□□ -0.96
MARK3-216ENST00000558953 NUTM2EB1AL46 878 aaPredicted RBP9.06□□□□□ -0.96
MARK3-216ENST00000558953 NUTM2AQ8IVF1 878 aaPredicted RBP9.06□□□□□ -0.96
MARK3-216ENST00000558953 KNDC1Q76NI1 1749 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 CDC42BPGQ6DT37 1551 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 LRPPRCP42704 1394 aaKnown RBP9.05□□□□□ -0.96
MARK3-216ENST00000558953 PRR20EP86478 221 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 PRR20CP86479 221 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 PRR20DP86480 221 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 PRR20BP86481 221 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 PRR20AP86496 221 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 TECPR2O15040 1411 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 PIK3C2GO75747 1445 aa9.05□□□□□ -0.96
MARK3-216ENST00000558953 ABCC11Q96J66 1382 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 RAB3GAP2Q9H2M9 1393 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 RNF40O75150 1001 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 COPS2P61201 443 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
MARK3-216ENST00000558953 DDX12PQ92771 950 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 DDX17Q92841 729 aaKnown RBP9.04□□□□□ -0.96
MARK3-216ENST00000558953 ORAI2Q96SN7 254 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 STK26Q9P289 416 aa9.04□□□□□ -0.96
MARK3-216ENST00000558953 SOS2Q07890 1332 aaPredicted RBP9.04□□□□□ -0.96
MARK3-216ENST00000558953 PNPLA6Q8IY17 1366 aa9.03□□□□□ -0.96
MARK3-216ENST00000558953 MAP3K7O43318 606 aa9.03□□□□□ -0.96
MARK3-216ENST00000558953 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
MARK3-216ENST00000558953 TMEM132EQ6IEE7 984 aa9.03□□□□□ -0.96
MARK3-216ENST00000558953 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
MARK3-216ENST00000558953 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
MARK3-216ENST00000558953 C14orf93Q9H972 538 aaKnown RBP9.03□□□□□ -0.96
MARK3-216ENST00000558953 DPYSL4O14531 572 aa9.02□□□□□ -0.97
MARK3-216ENST00000558953 ESCO1Q5FWF5 840 aa9.02□□□□□ -0.97
MARK3-216ENST00000558953 WAPLQ7Z5K2 1190 aa9.02□□□□□ -0.97
MARK3-216ENST00000558953 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
MARK3-216ENST00000558953 YTHDC2Q9H6S0 1430 aaKnown RBP9.02□□□□□ -0.97
MARK3-216ENST00000558953 MYOM2P54296 1465 aa9.02□□□□□ -0.97
MARK3-216ENST00000558953 NRXN1Q9ULB1 1477 aa9.02□□□□□ -0.97
MARK3-216ENST00000558953 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 RXRBP28702 533 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 HAP1P54257 671 aaPredicted RBP9.01□□□□□ -0.97
MARK3-216ENST00000558953 PRSS12P56730 875 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
MARK3-216ENST00000558953 TATDN2Q93075 761 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
MARK3-216ENST00000558953 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.01□□□□□ -0.97
MARK3-216ENST00000558953 AFF2P51816 1311 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 NPHP3Q7Z494 1330 aa9.01□□□□□ -0.97
MARK3-216ENST00000558953 DHX57Q6P158 1386 aaKnown RBP9□□□□□ -0.97
MARK3-216ENST00000558953 FMN2Q9NZ56 1722 aa9□□□□□ -0.97
MARK3-216ENST00000558953 ZPR1O75312 459 aa9□□□□□ -0.97
MARK3-216ENST00000558953 HRCP23327 699 aa9□□□□□ -0.97
MARK3-216ENST00000558953 CFAP70Q5T0N1 1121 aa9□□□□□ -0.97
MARK3-216ENST00000558953 NECTIN2Q92692 538 aa9□□□□□ -0.97
MARK3-216ENST00000558953 CFAP44Q96MT7 982 aa9□□□□□ -0.97
MARK3-216ENST00000558953 C8orf37Q96NL8 207 aa9□□□□□ -0.97
MARK3-216ENST00000558953 FAM198AQ9UFP1 575 aa9□□□□□ -0.97
MARK3-216ENST00000558953 COL22A1Q8NFW1 1626 aaPredicted RBP9□□□□□ -0.97
MARK3-216ENST00000558953 CDK12Q9NYV4 1490 aaPredicted RBP9□□□□□ -0.97
MARK3-216ENST00000558953 PLEKHH1Q9ULM0 1364 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 RNF223E7ERA6 249 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 C3orf80F5H4A9 247 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 FOXO3O43524 673 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 ADAMTS2O95450 1211 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 NBR1Q14596 966 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 NGLY1Q96IV0 654 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 KIF1AQ12756 1690 aa8.99□□□□□ -0.97
MARK3-216ENST00000558953 PXDNQ92626 1479 aa8.98□□□□□ -0.97
MARK3-216ENST00000558953 NUTM2FA1L443 756 aa8.98□□□□□ -0.97
MARK3-216ENST00000558953 ST8SIA5O15466 376 aa8.98□□□□□ -0.97
MARK3-216ENST00000558953 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
MARK3-216ENST00000558953 WFS1O76024 890 aa8.98□□□□□ -0.97
MARK3-216ENST00000558953 RBM6P78332 1123 aaKnown RBP8.98□□□□□ -0.97
MARK3-216ENST00000558953 CAMK2BQ13554 666 aa8.98□□□□□ -0.97
MARK3-216ENST00000558953 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
MARK3-216ENST00000558953 AAASQ9NRG9 546 aa8.98□□□□□ -0.97
MARK3-216ENST00000558953 RGPD8O14715 1765 aaPredicted RBP8.98□□□□□ -0.97
MARK3-216ENST00000558953 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
MARK3-216ENST00000558953 DLC1Q96QB1 1528 aa8.97□□□□□ -0.97
MARK3-216ENST00000558953 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
MARK3-216ENST00000558953 SPRYD3Q8NCJ5 442 aa8.96□□□□□ -0.98
MARK3-216ENST00000558953 DCAF11Q8TEB1 546 aa8.96□□□□□ -0.98
MARK3-216ENST00000558953 PRAM1Q96QH2 718 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms