RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CCDC136Q96JN2 1154 aa17.75■□□□□ 0.43
TPM1-215ENST00000558868 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
TPM1-215ENST00000558868 CAMTA1Q9Y6Y1 1673 aa17.74■□□□□ 0.43
TPM1-215ENST00000558868 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
TPM1-215ENST00000558868 ALDH1L2Q3SY69 923 aa17.74■□□□□ 0.43
TPM1-215ENST00000558868 PLEKHO1Q53GL0 409 aaPredicted RBP17.74■□□□□ 0.43
TPM1-215ENST00000558868 ERBB3P21860 1342 aa17.73■□□□□ 0.43
TPM1-215ENST00000558868 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
TPM1-215ENST00000558868 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
TPM1-215ENST00000558868 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
TPM1-215ENST00000558868 PLEKHG2Q9H7P9 1386 aa17.73■□□□□ 0.43
TPM1-215ENST00000558868 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
TPM1-215ENST00000558868 CHL1O00533 1208 aa17.72■□□□□ 0.43
TPM1-215ENST00000558868 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
TPM1-215ENST00000558868 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
TPM1-215ENST00000558868 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
TPM1-215ENST00000558868 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
TPM1-215ENST00000558868 COL18A1P39060 1754 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 KIAA0232Q92628 1395 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 MCM10Q7L590 875 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
TPM1-215ENST00000558868 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 BABAM1Q9NWV8 329 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 CRB1P82279 1406 aa17.71■□□□□ 0.43
TPM1-215ENST00000558868 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
TPM1-215ENST00000558868 AAMPQ13685 434 aa17.7■□□□□ 0.42
TPM1-215ENST00000558868 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
TPM1-215ENST00000558868 KIF16BQ96L93 1317 aa17.7■□□□□ 0.42
TPM1-215ENST00000558868 RGPD2P0DJD1 1756 aa17.69■□□□□ 0.42
TPM1-215ENST00000558868 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
TPM1-215ENST00000558868 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
TPM1-215ENST00000558868 BRPF1P55201 1214 aaPredicted RBP17.69■□□□□ 0.42
TPM1-215ENST00000558868 C20orf194Q5TEA3 1177 aa17.69■□□□□ 0.42
TPM1-215ENST00000558868 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
TPM1-215ENST00000558868 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
TPM1-215ENST00000558868 RGPD5Q99666 1765 aa17.68■□□□□ 0.42
TPM1-215ENST00000558868 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
TPM1-215ENST00000558868 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
TPM1-215ENST00000558868 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
TPM1-215ENST00000558868 NLRP2Q9NX02 1062 aa17.68■□□□□ 0.42
TPM1-215ENST00000558868 VAMP4O75379 141 aa17.67■□□□□ 0.42
TPM1-215ENST00000558868 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
TPM1-215ENST00000558868 RAPGEF4Q8WZA2 1011 aa17.67■□□□□ 0.42
TPM1-215ENST00000558868 LRRC37A3O60309 1634 aa17.67■□□□□ 0.42
TPM1-215ENST00000558868 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
TPM1-215ENST00000558868 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
TPM1-215ENST00000558868 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
TPM1-215ENST00000558868 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
TPM1-215ENST00000558868 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
TPM1-215ENST00000558868 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
TPM1-215ENST00000558868 ABCA3Q99758 1704 aa17.65■□□□□ 0.42
TPM1-215ENST00000558868 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
TPM1-215ENST00000558868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.65■□□□□ 0.428e-8■■□□□ 14.3
TPM1-215ENST00000558868 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
TPM1-215ENST00000558868 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.42
TPM1-215ENST00000558868 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
TPM1-215ENST00000558868 FTSJ3Q8IY81 847 aaKnown RBP17.63■□□□□ 0.41
TPM1-215ENST00000558868 DZIP1LQ8IYY4 767 aaKnown RBP17.63■□□□□ 0.41
TPM1-215ENST00000558868 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
TPM1-215ENST00000558868 IL17REQ8NFR9 667 aa17.63■□□□□ 0.41
TPM1-215ENST00000558868 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
TPM1-215ENST00000558868 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
TPM1-215ENST00000558868 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
TPM1-215ENST00000558868 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
TPM1-215ENST00000558868 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
TPM1-215ENST00000558868 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
TPM1-215ENST00000558868 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
TPM1-215ENST00000558868 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
TPM1-215ENST00000558868 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
TPM1-215ENST00000558868 NOB1Q9ULX3 412 aaKnown RBP17.61■□□□□ 0.41
TPM1-215ENST00000558868 COL22A1Q8NFW1 1626 aaPredicted RBP17.6■□□□□ 0.41
TPM1-215ENST00000558868 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
TPM1-215ENST00000558868 TEFQ10587 303 aa17.59■□□□□ 0.41
TPM1-215ENST00000558868 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
TPM1-215ENST00000558868 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
TPM1-215ENST00000558868 COL5A2P05997 1499 aaPredicted RBP17.58■□□□□ 0.41
TPM1-215ENST00000558868 RNMTO43148 476 aaKnown RBP17.58■□□□□ 0.4
TPM1-215ENST00000558868 TRIM27P14373 513 aa17.58■□□□□ 0.4
TPM1-215ENST00000558868 EVA1CP58658 441 aa17.58■□□□□ 0.4
TPM1-215ENST00000558868 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
TPM1-215ENST00000558868 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.4
TPM1-215ENST00000558868 API5Q9BZZ5 524 aaKnown RBP17.58■□□□□ 0.4
TPM1-215ENST00000558868 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
TPM1-215ENST00000558868 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
TPM1-215ENST00000558868 CARD10Q9BWT7 1032 aa17.57■□□□□ 0.4
TPM1-215ENST00000558868 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
TPM1-215ENST00000558868 DDX19BQ9UMR2 479 aa17.57■□□□□ 0.4
TPM1-215ENST00000558868 PHLPP1O60346 1717 aa17.56■□□□□ 0.4
TPM1-215ENST00000558868 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
TPM1-215ENST00000558868 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
TPM1-215ENST00000558868 RLBP1P12271 317 aa17.55■□□□□ 0.4
TPM1-215ENST00000558868 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
TPM1-215ENST00000558868 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
TPM1-215ENST00000558868 COL14A1Q05707 1796 aaKnown RBP17.55■□□□□ 0.4
TPM1-215ENST00000558868 MEGF6O75095 1541 aa17.54■□□□□ 0.4
TPM1-215ENST00000558868 PARP4Q9UKK3 1724 aaKnown RBP17.54■□□□□ 0.4
TPM1-215ENST00000558868 PTPRCP08575 1304 aa17.53■□□□□ 0.4
TPM1-215ENST00000558868 PKD1L3Q7Z443 1732 aa17.53■□□□□ 0.4
TPM1-215ENST00000558868 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms