RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ITGB4P16144 1822 aa15.05■□□□□ -0
PBX1-213ENST00000558796 TOGARAM1Q9Y4F4 1720 aa15.04■□□□□ -0
PBX1-213ENST00000558796 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
PBX1-213ENST00000558796 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
PBX1-213ENST00000558796 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
PBX1-213ENST00000558796 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
PBX1-213ENST00000558796 VIRMAQ69YN4 1812 aaKnown RBP15.03■□□□□ -0
PBX1-213ENST00000558796 SRCAPQ6ZRS2 3230 aa15.03■□□□□ -0
PBX1-213ENST00000558796 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
PBX1-213ENST00000558796 PER1O15534 1290 aaPredicted RBP15.02■□□□□ -0
PBX1-213ENST00000558796 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
PBX1-213ENST00000558796 RAPGEF4Q8WZA2 1011 aa15.02■□□□□ -0
PBX1-213ENST00000558796 CAMKK2Q96RR4 588 aa15.02■□□□□ -0
PBX1-213ENST00000558796 BCL11BQ9C0K0 894 aaPredicted RBP15.01□□□□□ -0.01
PBX1-213ENST00000558796 KCNQ2O43526 872 aa15□□□□□ -0.01
PBX1-213ENST00000558796 TATP17735 454 aaPredicted RBP15□□□□□ -0.01
PBX1-213ENST00000558796 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
PBX1-213ENST00000558796 EYA1Q99502 592 aa15□□□□□ -0.01
PBX1-213ENST00000558796 LY75O60449 1722 aa15□□□□□ -0.01
PBX1-213ENST00000558796 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
PBX1-213ENST00000558796 PSDA5PKW4 1024 aaPredicted RBP14.98□□□□□ -0.01
PBX1-213ENST00000558796 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
PBX1-213ENST00000558796 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
PBX1-213ENST00000558796 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
PBX1-213ENST00000558796 TUBGCP6Q96RT7 1819 aa14.96□□□□□ -0.01
PBX1-213ENST00000558796 LRP5O75197 1615 aa14.95□□□□□ -0.02
PBX1-213ENST00000558796 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
PBX1-213ENST00000558796 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
PBX1-213ENST00000558796 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
PBX1-213ENST00000558796 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
PBX1-213ENST00000558796 PLSCR1O15162 318 aa14.94□□□□□ -0.02
PBX1-213ENST00000558796 MTHFSP49914 203 aa14.94□□□□□ -0.02
PBX1-213ENST00000558796 TAF1LQ8IZX4 1826 aa14.94□□□□□ -0.02
PBX1-213ENST00000558796 CASZ1Q86V15 1759 aa14.93□□□□□ -0.02
PBX1-213ENST00000558796 CYP27B1O15528 508 aa14.93□□□□□ -0.02
PBX1-213ENST00000558796 PRIM1P49642 420 aaKnown RBP14.93□□□□□ -0.02
PBX1-213ENST00000558796 AEBP1Q8IUX7 1158 aa14.93□□□□□ -0.02
PBX1-213ENST00000558796 SCN11AQ9UI33 1791 aa14.93□□□□□ -0.02
PBX1-213ENST00000558796 SPG7Q9UQ90 795 aa14.92□□□□□ -0.02
PBX1-213ENST00000558796 C5P01031 1676 aa14.92□□□□□ -0.02
PBX1-213ENST00000558796 IL13P35225 146 aa14.91□□□□□ -0.02
PBX1-213ENST00000558796 TXNRD1Q16881 649 aa14.91□□□□□ -0.02
PBX1-213ENST00000558796 PROM2Q8N271 834 aa14.91□□□□□ -0.02
PBX1-213ENST00000558796 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
PBX1-213ENST00000558796 QSER1Q2KHR3 1735 aa14.9□□□□□ -0.02
PBX1-213ENST00000558796 NBPF14Q5TI25 921 aa14.9□□□□□ -0.02
PBX1-213ENST00000558796 KDRP35968 1356 aa14.89□□□□□ -0.03
PBX1-213ENST00000558796 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
PBX1-213ENST00000558796 SULT6B1Q6IMI4 303 aa14.89□□□□□ -0.03
PBX1-213ENST00000558796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
PBX1-213ENST00000558796 DIAPH1O60610 1272 aaKnown RBP14.87□□□□□ -0.03
PBX1-213ENST00000558796 PHKG2P15735 406 aa14.87□□□□□ -0.03
PBX1-213ENST00000558796 HMOX1P09601 288 aa14.86□□□□□ -0.03
PBX1-213ENST00000558796 ZNF530Q6P9A1 599 aaPredicted RBP14.86□□□□□ -0.03
PBX1-213ENST00000558796 MPRIPQ6WCQ1 1025 aa14.86□□□□□ -0.03
PBX1-213ENST00000558796 IFNL2Q8IZJ0 200 aa14.86□□□□□ -0.03
PBX1-213ENST00000558796 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
PBX1-213ENST00000558796 KCNQ4P56696 695 aa14.85□□□□□ -0.03
PBX1-213ENST00000558796 NKX1-1Q15270 411 aaPredicted RBP14.85□□□□□ -0.03
PBX1-213ENST00000558796 PLEKHO1Q53GL0 409 aaPredicted RBP14.85□□□□□ -0.03
PBX1-213ENST00000558796 LRRC4BQ9NT99 713 aa14.85□□□□□ -0.03
PBX1-213ENST00000558796 PPP2R1AP30153 589 aa14.84□□□□□ -0.03
PBX1-213ENST00000558796 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
PBX1-213ENST00000558796 STK32BQ9NY57 414 aa14.84□□□□□ -0.03
PBX1-213ENST00000558796 PALLDQ8WX93 1383 aa14.84□□□□□ -0.03
PBX1-213ENST00000558796 U2SURPO15042 1029 aaKnown RBP14.83□□□□□ -0.04
PBX1-213ENST00000558796 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
PBX1-213ENST00000558796 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.04
PBX1-213ENST00000558796 C4BP0C0L5 1744 aa14.83□□□□□ -0.04
PBX1-213ENST00000558796 UBR3Q6ZT12 1888 aa14.82□□□□□ -0.04
PBX1-213ENST00000558796 DLG5Q8TDM6 1919 aa14.82□□□□□ -0.04
PBX1-213ENST00000558796 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
PBX1-213ENST00000558796 ZNF827Q17R98 1081 aa14.82□□□□□ -0.04
PBX1-213ENST00000558796 PIGBQ92521 554 aa14.82□□□□□ -0.04
PBX1-213ENST00000558796 CFAP53Q96M91 514 aa14.82□□□□□ -0.04
PBX1-213ENST00000558796 COL5A3P25940 1745 aaPredicted RBP14.81□□□□□ -0.04
PBX1-213ENST00000558796 SLC15A2Q16348 729 aa14.81□□□□□ -0.04
PBX1-213ENST00000558796 C1orf141Q5JVX7 400 aa14.81□□□□□ -0.04
PBX1-213ENST00000558796 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
PBX1-213ENST00000558796 PDGFDQ9GZP0 370 aaPredicted RBP14.81□□□□□ -0.04
PBX1-213ENST00000558796 TMOD3Q9NYL9 352 aa14.81□□□□□ -0.04
PBX1-213ENST00000558796 CCNL1Q9UK58 526 aaPredicted RBP14.81□□□□□ -0.04
PBX1-213ENST00000558796 SIPA1L3O60292 1781 aaPredicted RBP14.8□□□□□ -0.04
PBX1-213ENST00000558796 ZNF831Q5JPB2 1677 aa14.8□□□□□ -0.04
PBX1-213ENST00000558796 HSP90AB1P08238 724 aaKnown RBP14.79□□□□□ -0.04
PBX1-213ENST00000558796 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
PBX1-213ENST00000558796 TJP1Q07157 1748 aa14.78□□□□□ -0.04
PBX1-213ENST00000558796 MRC1P22897 1456 aa14.78□□□□□ -0.04
PBX1-213ENST00000558796 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
PBX1-213ENST00000558796 SMARCC1Q92922 1105 aaPredicted RBP14.77□□□□□ -0.05
PBX1-213ENST00000558796 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
PBX1-213ENST00000558796 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
PBX1-213ENST00000558796 UBR2Q8IWV8 1755 aa14.77□□□□□ -0.05
PBX1-213ENST00000558796 ERVV-2B6SEH9 535 aa14.76□□□□□ -0.05
PBX1-213ENST00000558796 ZBTB7AO95365 584 aa14.76□□□□□ -0.05
PBX1-213ENST00000558796 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
PBX1-213ENST00000558796 AKAP4Q5JQC9 854 aa14.76□□□□□ -0.05
PBX1-213ENST00000558796 NUDCQ9Y266 331 aa14.76□□□□□ -0.05
PBX1-213ENST00000558796 MYH14Q7Z406 1995 aaKnown RBP14.76□□□□□ -0.05
PBX1-213ENST00000558796 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms