RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 BRPF3Q9ULD4 1205 aa5.56□□□□□ -1.52
ZEB1-212ENST00000558655 PHRF1Q9P1Y6 1649 aaKnown RBP5.56□□□□□ -1.52
ZEB1-212ENST00000558655 ANKRD36BQ8N2N9 1353 aa5.56□□□□□ -1.52
ZEB1-212ENST00000558655 FOXD4L5Q5VV16 416 aaPredicted RBP5.56□□□□□ -1.52
ZEB1-212ENST00000558655 REM2Q8IYK8 340 aaPredicted RBP5.56□□□□□ -1.52
ZEB1-212ENST00000558655 FOXD4L4Q8WXT5 416 aaPredicted RBP5.56□□□□□ -1.52
ZEB1-212ENST00000558655 PRR36Q9H6K5 1346 aa5.56□□□□□ -1.52
ZEB1-212ENST00000558655 PIK3C2AO00443 1686 aa5.56□□□□□ -1.52
ZEB1-212ENST00000558655 VPS72Q15906 364 aa5.55□□□□□ -1.52
ZEB1-212ENST00000558655 CDK19Q9BWU1 502 aa5.55□□□□□ -1.52
ZEB1-212ENST00000558655 BCCIPQ9P287 314 aaKnown RBP eCLIP5.55□□□□□ -1.52
ZEB1-212ENST00000558655 RBM25P49756 843 aaKnown RBP5.55□□□□□ -1.52
ZEB1-212ENST00000558655 SYT17Q9BSW7 474 aa5.55□□□□□ -1.52
ZEB1-212ENST00000558655 PPIP5K1Q6PFW1 1433 aa5.55□□□□□ -1.52
ZEB1-212ENST00000558655 MINK1Q8N4C8 1332 aaPredicted RBP5.55□□□□□ -1.52
ZEB1-212ENST00000558655 PXDNQ92626 1479 aa5.55□□□□□ -1.52
ZEB1-212ENST00000558655 NSD2O96028 1365 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 EDC4Q6P2E9 1401 aaKnown RBP5.54□□□□□ -1.52
ZEB1-212ENST00000558655 TNRC6CQ9HCJ0 1690 aaKnown RBP5.54□□□□□ -1.52
ZEB1-212ENST00000558655 KTN1Q86UP2 1357 aaKnown RBP5.54□□□□□ -1.52
ZEB1-212ENST00000558655 USP6P35125 1406 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 KIF3CO14782 793 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 UNC5CLQ8IV45 518 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 NUDT16Q96DE0 195 aaKnown RBP5.54□□□□□ -1.52
ZEB1-212ENST00000558655 CCDC61Q9Y6R9 512 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 SLIT3O75094 1523 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 ABCC6O95255 1503 aa5.54□□□□□ -1.52
ZEB1-212ENST00000558655 RBM42Q9BTD8 480 aaKnown RBP5.53□□□□□ -1.52
ZEB1-212ENST00000558655 SBNO1A3KN83 1393 aa5.53□□□□□ -1.52
ZEB1-212ENST00000558655 USP31Q70CQ4 1352 aa5.53□□□□□ -1.52
ZEB1-212ENST00000558655 ZFP91Q96JP5 570 aaPredicted RBP5.53□□□□□ -1.52
ZEB1-212ENST00000558655 CLEC11AQ9Y240 323 aa5.53□□□□□ -1.52
ZEB1-212ENST00000558655 A0A1W2PP64 1363 aa5.53□□□□□ -1.52
ZEB1-212ENST00000558655 PER1O15534 1290 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-212ENST00000558655 DDX10Q13206 875 aaKnown RBP5.52□□□□□ -1.53
ZEB1-212ENST00000558655 NEUROD2Q15784 382 aa5.52□□□□□ -1.53
ZEB1-212ENST00000558655 PITPNM1O00562 1244 aa5.52□□□□□ -1.53
ZEB1-212ENST00000558655 AKT1S1Q96B36 256 aa5.52□□□□□ -1.53
ZEB1-212ENST00000558655 CABP2Q9NPB3 220 aa5.52□□□□□ -1.53
ZEB1-212ENST00000558655 ATF3P18847 181 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 PTGER2P43116 358 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 ZNF592Q92610 1267 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 TTC21AQ8NDW8 1320 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 SYNGAP1Q96PV0 1343 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 OVOS2A0A0J9YW53 1432 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 OVOS2Q6IE36 1432 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 SMG6Q86US8 1419 aaKnown RBP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 NRAPQ86VF7 1730 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 LTN1O94822 1766 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 MAP2P11137 1827 aaKnown RBP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 PPEF1O14829 653 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 SRPK2P78362 688 aaKnown RBP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 SAFB2Q14151 953 aaKnown RBP eCLIP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 TMED8Q6PL24 325 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 MPNDQ8N594 471 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 MTFR1LQ9H019 292 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 CWC22Q9HCG8 908 aaKnown RBP5.51□□□□□ -1.53
ZEB1-212ENST00000558655 TERF2IPQ9NYB0 399 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 COL18A1P39060 1754 aa5.51□□□□□ -1.53
ZEB1-212ENST00000558655 PLCH1Q4KWH8 1693 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 FAM208AQ9UK61 1670 aaKnown RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 THSD7BQ9C0I4 1608 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 NFAT5O94916 1531 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 NSD3Q9BZ95 1437 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 SOS2Q07890 1332 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 A0A0U1RQG5 324 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 FAM177A1Q8N128 213 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 PHF8Q9UPP1 1060 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 APBB1O00213 710 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 BRINP3Q76B58 766 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 SEPT12Q8IYM1 358 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 CARD14Q9BXL6 1004 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 VIRMAQ69YN4 1812 aaKnown RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 TNS3Q68CZ2 1445 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 ACEP12821 1306 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 CGNL1Q0VF96 1302 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 FAM196AQ6ZSG2 479 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 HDGFL2Q7Z4V5 671 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 SGIP1Q9BQI5 828 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 SLC12A5Q9H2X9 1139 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 CABP1Q9NZU7 370 aa5.5□□□□□ -1.53
ZEB1-212ENST00000558655 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-212ENST00000558655 PANK3Q9H999 370 aa5.49□□□□□ -1.53
ZEB1-212ENST00000558655 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
ZEB1-212ENST00000558655 PLEKHG2Q9H7P9 1386 aa5.49□□□□□ -1.53
ZEB1-212ENST00000558655 LMO7Q8WWI1 1683 aa5.49□□□□□ -1.53
ZEB1-212ENST00000558655 EN1Q05925 392 aaPredicted RBP5.49□□□□□ -1.53
ZEB1-212ENST00000558655 CNGB1Q14028 1251 aaPredicted RBP5.49□□□□□ -1.53
ZEB1-212ENST00000558655 GPR162Q16538 588 aa5.49□□□□□ -1.53
ZEB1-212ENST00000558655 PEAK1Q9H792 1746 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 NPHP3Q7Z494 1330 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 TTC21BQ7Z4L5 1316 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 AIDAQ96BJ3 306 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 SNX27Q96L92 541 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 ARHGEF10O15013 1369 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 INSRP06213 1382 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 KIF24Q5T7B8 1368 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 PLA2G5P39877 138 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 CERS3Q8IU89 383 aa5.48□□□□□ -1.53
ZEB1-212ENST00000558655 SLC16A10Q8TF71 515 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 270.4 ms