RNA–Protein interactions for RNA: ENST00000558547.1

PIF1-204, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-204ENST00000558547 WDR90Q96KV7 1748 aa10.36□□□□□ -0.75
PIF1-204ENST00000558547 USP54Q70EL1 1684 aa10.36□□□□□ -0.75
PIF1-204ENST00000558547 RGPD2P0DJD1 1756 aa10.36□□□□□ -0.75
PIF1-204ENST00000558547 TTC21AQ8NDW8 1320 aa10.35□□□□□ -0.75
PIF1-204ENST00000558547 APLP1P51693 650 aa10.35□□□□□ -0.75
PIF1-204ENST00000558547 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
PIF1-204ENST00000558547 CD2APQ9Y5K6 639 aa10.35□□□□□ -0.75
PIF1-204ENST00000558547 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
PIF1-204ENST00000558547 ANKRD36BQ8N2N9 1353 aa10.35□□□□□ -0.75
PIF1-204ENST00000558547 TAF1LQ8IZX4 1826 aa10.35□□□□□ -0.75
PIF1-204ENST00000558547 HTRA3P83110 453 aa10.34□□□□□ -0.75
PIF1-204ENST00000558547 NME9Q86XW9 330 aa10.34□□□□□ -0.75
PIF1-204ENST00000558547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.34□□□□□ -0.75
PIF1-204ENST00000558547 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
PIF1-204ENST00000558547 EVC2Q86UK5 1308 aa10.33□□□□□ -0.76
PIF1-204ENST00000558547 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
PIF1-204ENST00000558547 TOGARAM1Q9Y4F4 1720 aa10.33□□□□□ -0.76
PIF1-204ENST00000558547 SMIM5Q71RC9 77 aa10.33□□□□□ -0.76
PIF1-204ENST00000558547 FAM208AQ9UK61 1670 aaKnown RBP10.33□□□□□ -0.76
PIF1-204ENST00000558547 AMIGO3Q86WK7 504 aa10.32□□□□□ -0.76
PIF1-204ENST00000558547 LTV1Q96GA3 475 aaPredicted RBP10.32□□□□□ -0.76
PIF1-204ENST00000558547 USP31Q70CQ4 1352 aa10.31□□□□□ -0.76
PIF1-204ENST00000558547 UBR3Q6ZT12 1888 aa10.3□□□□□ -0.76
PIF1-204ENST00000558547 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
PIF1-204ENST00000558547 N4BP2Q86UW6 1770 aaPredicted RBP10.3□□□□□ -0.76
PIF1-204ENST00000558547 TOMM70O94826 608 aa10.3□□□□□ -0.76
PIF1-204ENST00000558547 NMRK2Q9NPI5 230 aa10.3□□□□□ -0.76
PIF1-204ENST00000558547 C4BP0C0L5 1744 aa10.3□□□□□ -0.76
PIF1-204ENST00000558547 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
PIF1-204ENST00000558547 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
PIF1-204ENST00000558547 USP47Q96K76 1375 aa10.29□□□□□ -0.76
PIF1-204ENST00000558547 SBNO2Q9Y2G9 1366 aa10.29□□□□□ -0.76
PIF1-204ENST00000558547 MEGF6O75095 1541 aa10.29□□□□□ -0.76
PIF1-204ENST00000558547 TNS4Q8IZW8 715 aa10.28□□□□□ -0.76
PIF1-204ENST00000558547 ZCRB1Q8TBF4 217 aaKnown RBP10.28□□□□□ -0.76
PIF1-204ENST00000558547 KLRG1Q96E93 195 aa10.28□□□□□ -0.76
PIF1-204ENST00000558547 PHF14O94880 888 aa10.27□□□□□ -0.77
PIF1-204ENST00000558547 PRELPP51888 382 aa10.27□□□□□ -0.77
PIF1-204ENST00000558547 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
PIF1-204ENST00000558547 IP6K1Q92551 441 aa10.27□□□□□ -0.77
PIF1-204ENST00000558547 ITGB4P16144 1822 aa10.26□□□□□ -0.77
PIF1-204ENST00000558547 FBLN1P23142 703 aa10.26□□□□□ -0.77
PIF1-204ENST00000558547 KIF13BQ9NQT8 1826 aa10.26□□□□□ -0.77
PIF1-204ENST00000558547 USHBP1Q8N6Y0 703 aa10.25□□□□□ -0.77
PIF1-204ENST00000558547 FLAD1Q8NFF5 587 aa10.25□□□□□ -0.77
PIF1-204ENST00000558547 PALLDQ8WX93 1383 aa10.25□□□□□ -0.77
PIF1-204ENST00000558547 PXDNLA1KZ92 1463 aa10.24□□□□□ -0.77
PIF1-204ENST00000558547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
PIF1-204ENST00000558547 AK7Q96M32 723 aa10.24□□□□□ -0.77
PIF1-204ENST00000558547 PKD1L3Q7Z443 1732 aa10.24□□□□□ -0.77
PIF1-204ENST00000558547 A0A0G2JLW4 131 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 HOXC9P31274 260 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 NBPF6Q5VWK0 638 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 MPRIPQ6WCQ1 1025 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 ARHGAP27Q6ZUM4 889 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
PIF1-204ENST00000558547 TMC1Q8TDI8 760 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 NBPF4Q96M43 638 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 SLC12A5Q9H2X9 1139 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 BCS1LQ9Y276 419 aa10.23□□□□□ -0.77
PIF1-204ENST00000558547 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
PIF1-204ENST00000558547 BRCA1P38398 1863 aaKnown RBP10.23□□□□□ -0.77
PIF1-204ENST00000558547 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
PIF1-204ENST00000558547 EDC4Q6P2E9 1401 aaKnown RBP10.22□□□□□ -0.77
PIF1-204ENST00000558547 KCPQ6ZWJ8 1503 aa10.22□□□□□ -0.77
PIF1-204ENST00000558547 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.77
PIF1-204ENST00000558547 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
PIF1-204ENST00000558547 A0A1W2PP64 1363 aa10.21□□□□□ -0.78
PIF1-204ENST00000558547 ROCK2O75116 1388 aaKnown RBP10.2□□□□□ -0.78
PIF1-204ENST00000558547 MMP10P09238 476 aa10.2□□□□□ -0.78
PIF1-204ENST00000558547 HDGFL2Q7Z4V5 671 aaPredicted RBP10.2□□□□□ -0.78
PIF1-204ENST00000558547 C16orf71Q8IYS4 520 aaPredicted RBP10.2□□□□□ -0.78
PIF1-204ENST00000558547 ARFGEF1Q9Y6D6 1849 aa10.19□□□□□ -0.78
PIF1-204ENST00000558547 AMPHP49418 695 aa10.19□□□□□ -0.78
PIF1-204ENST00000558547 FSTL1Q12841 308 aa10.19□□□□□ -0.78
PIF1-204ENST00000558547 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
PIF1-204ENST00000558547 RRAGCQ9HB90 399 aa10.19□□□□□ -0.78
PIF1-204ENST00000558547 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
PIF1-204ENST00000558547 GNPATO15228 680 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 CYP27B1O15528 508 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 FCHSD2O94868 740 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 HSPA1AP0DMV8 641 aaKnown RBP10.18□□□□□ -0.78
PIF1-204ENST00000558547 HSPA1BP0DMV9 641 aaKnown RBP10.18□□□□□ -0.78
PIF1-204ENST00000558547 DPEP1P16444 411 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 SSFA2P28290 1259 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 RAPGEF4Q8WZA2 1011 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 PIGBQ92521 554 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 SBF1O95248 1867 aa10.18□□□□□ -0.78
PIF1-204ENST00000558547 C10orf71Q711Q0 1435 aa10.17□□□□□ -0.78
PIF1-204ENST00000558547 NSD3Q9BZ95 1437 aa10.17□□□□□ -0.78
PIF1-204ENST00000558547 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
PIF1-204ENST00000558547 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
PIF1-204ENST00000558547 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
PIF1-204ENST00000558547 TATP17735 454 aaPredicted RBP10.17□□□□□ -0.78
PIF1-204ENST00000558547 ITPK1Q13572 414 aa10.17□□□□□ -0.78
PIF1-204ENST00000558547 RRS1Q15050 365 aaKnown RBP10.17□□□□□ -0.78
PIF1-204ENST00000558547 CGNL1Q0VF96 1302 aa10.16□□□□□ -0.78
PIF1-204ENST00000558547 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
PIF1-204ENST00000558547 KCNA3P22001 575 aa10.16□□□□□ -0.78
PIF1-204ENST00000558547 SIK1P57059 783 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms