RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 CCNL1Q9UK58 526 aaPredicted RBP19.13■□□□□ 0.65
CPNE6-207ENST00000558541 LY75O60449 1722 aa19.11■□□□□ 0.65
CPNE6-207ENST00000558541 PRIM1P49642 420 aaKnown RBP19.11■□□□□ 0.65
CPNE6-207ENST00000558541 HTRA3P83110 453 aa19.11■□□□□ 0.65
CPNE6-207ENST00000558541 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
CPNE6-207ENST00000558541 TTC21BQ7Z4L5 1316 aa19.1■□□□□ 0.65
CPNE6-207ENST00000558541 IGSF1Q8N6C5 1336 aa19.1■□□□□ 0.65
CPNE6-207ENST00000558541 L3MBTL2Q969R5 705 aa19.1■□□□□ 0.65
CPNE6-207ENST00000558541 CENPJQ9HC77 1338 aaPredicted RBP19.09■□□□□ 0.65
CPNE6-207ENST00000558541 ERBB3P21860 1342 aa19.08■□□□□ 0.65
CPNE6-207ENST00000558541 LTN1O94822 1766 aa19.06■□□□□ 0.64
CPNE6-207ENST00000558541 NFAT5O94916 1531 aa19.06■□□□□ 0.64
CPNE6-207ENST00000558541 DOT1LQ8TEK3 1739 aa19.06■□□□□ 0.64
CPNE6-207ENST00000558541 C16orf71Q8IYS4 520 aaPredicted RBP19.06■□□□□ 0.64
CPNE6-207ENST00000558541 JMYQ8N9B5 988 aa19.06■□□□□ 0.64
CPNE6-207ENST00000558541 ANKRD24Q8TF21 1146 aa19.06■□□□□ 0.64
CPNE6-207ENST00000558541 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
CPNE6-207ENST00000558541 TTC21AQ8NDW8 1320 aa19.04■□□□□ 0.64
CPNE6-207ENST00000558541 NBPF1Q3BBV0 1214 aa19.04■□□□□ 0.64
CPNE6-207ENST00000558541 NMRK2Q9NPI5 230 aa19.04■□□□□ 0.64
CPNE6-207ENST00000558541 KIAA1210Q9ULL0 1709 aa19.03■□□□□ 0.64
CPNE6-207ENST00000558541 FLAD1Q8NFF5 587 aa19.03■□□□□ 0.64
CPNE6-207ENST00000558541 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
CPNE6-207ENST00000558541 USP47Q96K76 1375 aa19.02■□□□□ 0.64
CPNE6-207ENST00000558541 RBM46Q8TBY0 533 aaKnown RBP19.01■□□□□ 0.63
CPNE6-207ENST00000558541 C5P01031 1676 aa19.01■□□□□ 0.63
CPNE6-207ENST00000558541 EVC2Q86UK5 1308 aa19■□□□□ 0.63
CPNE6-207ENST00000558541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.99■□□□□ 0.63
CPNE6-207ENST00000558541 LTV1Q96GA3 475 aaPredicted RBP18.99■□□□□ 0.63
CPNE6-207ENST00000558541 KTN1Q86UP2 1357 aaKnown RBP18.98■□□□□ 0.63
CPNE6-207ENST00000558541 SLC34A2O95436 690 aa18.98■□□□□ 0.63
CPNE6-207ENST00000558541 TAF1LQ8IZX4 1826 aa18.97■□□□□ 0.63
CPNE6-207ENST00000558541 NSD2O96028 1365 aa18.97■□□□□ 0.63
CPNE6-207ENST00000558541 ARHGAP27Q6ZUM4 889 aa18.97■□□□□ 0.63
CPNE6-207ENST00000558541 PHF14O94880 888 aa18.96■□□□□ 0.63
CPNE6-207ENST00000558541 FSTL1Q12841 308 aa18.96■□□□□ 0.63
CPNE6-207ENST00000558541 PCNTO95613 3336 aa18.96■□□□□ 0.63
CPNE6-207ENST00000558541 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
CPNE6-207ENST00000558541 ZCRB1Q8TBF4 217 aaKnown RBP18.94■□□□□ 0.62
CPNE6-207ENST00000558541 AK7Q96M32 723 aa18.94■□□□□ 0.62
CPNE6-207ENST00000558541 BCS1LQ9Y276 419 aa18.94■□□□□ 0.62
CPNE6-207ENST00000558541 N4BP2Q86UW6 1770 aaPredicted RBP18.93■□□□□ 0.62
CPNE6-207ENST00000558541 CICQ96RK0 1608 aaPredicted RBP18.93■□□□□ 0.62
CPNE6-207ENST00000558541 USP54Q70EL1 1684 aa18.93■□□□□ 0.62
CPNE6-207ENST00000558541 HSPA1AP0DMV8 641 aaKnown RBP18.93■□□□□ 0.62
CPNE6-207ENST00000558541 HSPA1BP0DMV9 641 aaKnown RBP18.93■□□□□ 0.62
CPNE6-207ENST00000558541 NME9Q86XW9 330 aa18.92■□□□□ 0.62
CPNE6-207ENST00000558541 SMIM5Q71RC9 77 aa18.91■□□□□ 0.62
CPNE6-207ENST00000558541 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
CPNE6-207ENST00000558541 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
CPNE6-207ENST00000558541 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
CPNE6-207ENST00000558541 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.61
CPNE6-207ENST00000558541 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
CPNE6-207ENST00000558541 MON2Q7Z3U7 1717 aa18.88■□□□□ 0.61
CPNE6-207ENST00000558541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
CPNE6-207ENST00000558541 RRAGCQ9HB90 399 aa18.88■□□□□ 0.61
CPNE6-207ENST00000558541 KDM2BQ8NHM5 1336 aa18.88■□□□□ 0.61
CPNE6-207ENST00000558541 USP31Q70CQ4 1352 aa18.88■□□□□ 0.61
CPNE6-207ENST00000558541 A0A0G2JLW4 131 aa18.87■□□□□ 0.61
CPNE6-207ENST00000558541 C9orf131Q5VYM1 1079 aa18.87■□□□□ 0.61
CPNE6-207ENST00000558541 PALLDQ8WX93 1383 aa18.87■□□□□ 0.61
CPNE6-207ENST00000558541 FCHSD2O94868 740 aa18.86■□□□□ 0.61
CPNE6-207ENST00000558541 MPRIPQ6WCQ1 1025 aa18.86■□□□□ 0.61
CPNE6-207ENST00000558541 AMIGO3Q86WK7 504 aa18.86■□□□□ 0.61
CPNE6-207ENST00000558541 IP6K1Q92551 441 aa18.86■□□□□ 0.61
CPNE6-207ENST00000558541 SMC1BQ8NDV3 1235 aa18.85■□□□□ 0.61
CPNE6-207ENST00000558541 KCPQ6ZWJ8 1503 aa18.84■□□□□ 0.61
CPNE6-207ENST00000558541 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
CPNE6-207ENST00000558541 EIF4G2P78344 907 aaKnown RBP eCLIP18.84■□□□□ 0.61
CPNE6-207ENST00000558541 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
CPNE6-207ENST00000558541 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.61
CPNE6-207ENST00000558541 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.61
CPNE6-207ENST00000558541 MMP10P09238 476 aa18.83■□□□□ 0.6
CPNE6-207ENST00000558541 TGFB2P61812 414 aa18.83■□□□□ 0.6
CPNE6-207ENST00000558541 KIF13BQ9NQT8 1826 aa18.83■□□□□ 0.6
CPNE6-207ENST00000558541 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.6
CPNE6-207ENST00000558541 MEGF6O75095 1541 aa18.81■□□□□ 0.6
CPNE6-207ENST00000558541 SSFA2P28290 1259 aa18.81■□□□□ 0.6
CPNE6-207ENST00000558541 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
CPNE6-207ENST00000558541 ITGB4P16144 1822 aa18.81■□□□□ 0.6
CPNE6-207ENST00000558541 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
CPNE6-207ENST00000558541 TNRC6CQ9HCJ0 1690 aaKnown RBP18.8■□□□□ 0.6
CPNE6-207ENST00000558541 AMPHP49418 695 aa18.8■□□□□ 0.6
CPNE6-207ENST00000558541 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
CPNE6-207ENST00000558541 RNF181Q9P0P0 153 aa18.8■□□□□ 0.6
CPNE6-207ENST00000558541 DPEP1P16444 411 aa18.79■□□□□ 0.6
CPNE6-207ENST00000558541 HDGFL2Q7Z4V5 671 aaPredicted RBP18.79■□□□□ 0.6
CPNE6-207ENST00000558541 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
CPNE6-207ENST00000558541 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
CPNE6-207ENST00000558541 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
CPNE6-207ENST00000558541 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
CPNE6-207ENST00000558541 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
CPNE6-207ENST00000558541 BRCA1P38398 1863 aaKnown RBP18.77■□□□□ 0.6
CPNE6-207ENST00000558541 GNPATO15228 680 aa18.77■□□□□ 0.6
CPNE6-207ENST00000558541 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
CPNE6-207ENST00000558541 SBNO2Q9Y2G9 1366 aa18.77■□□□□ 0.6
CPNE6-207ENST00000558541 SBF1O95248 1867 aa18.76■□□□□ 0.59
CPNE6-207ENST00000558541 SLC24A1O60721 1099 aa18.75■□□□□ 0.59
CPNE6-207ENST00000558541 TATP17735 454 aaPredicted RBP18.75■□□□□ 0.59
CPNE6-207ENST00000558541 HOXC9P31274 260 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms