RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 RTF1Q92541 710 aaKnown RBP27.91■■■□□ 2.06
TMEM250-204ENST00000557985 MYH16Q9H6N6 1097 aa27.91■■■□□ 2.06
TMEM250-204ENST00000557985 USP35Q9P2H5 1018 aa27.91■■■□□ 2.06
TMEM250-204ENST00000557985 RCAN3Q9UKA8 241 aa27.91■■■□□ 2.06
TMEM250-204ENST00000557985 GNAT3A8MTJ3 354 aa27.9■■■□□ 2.06
TMEM250-204ENST00000557985 IL16Q14005 1332 aa27.9■■■□□ 2.06
TMEM250-204ENST00000557985 COL14A1Q05707 1796 aaKnown RBP27.9■■■□□ 2.06
TMEM250-204ENST00000557985 FAM208AQ9UK61 1670 aaKnown RBP27.9■■■□□ 2.06
TMEM250-204ENST00000557985 TATP17735 454 aaPredicted RBP27.89■■■□□ 2.06
TMEM250-204ENST00000557985 AMOTQ4VCS5 1084 aa27.89■■■□□ 2.06
TMEM250-204ENST00000557985 ZNF530Q6P9A1 599 aaPredicted RBP27.88■■■□□ 2.05
TMEM250-204ENST00000557985 CALD1Q05682 793 aaKnown RBP27.88■■■□□ 2.05
TMEM250-204ENST00000557985 CARD10Q9BWT7 1032 aa27.88■■■□□ 2.05
TMEM250-204ENST00000557985 FANCIQ9NVI1 1328 aa27.87■■■□□ 2.05
TMEM250-204ENST00000557985 IL17REQ8NFR9 667 aa27.86■■■□□ 2.05
TMEM250-204ENST00000557985 MEGF6O75095 1541 aa27.85■■■□□ 2.05
TMEM250-204ENST00000557985 MAP3K5Q99683 1374 aa27.85■■■□□ 2.05
TMEM250-204ENST00000557985 HTATSF1O43719 755 aaKnown RBP27.84■■■□□ 2.05
TMEM250-204ENST00000557985 ZNF853P0CG23 659 aa27.83■■■□□ 2.05
TMEM250-204ENST00000557985 GNAI1P63096 354 aa27.83■■■□□ 2.05
TMEM250-204ENST00000557985 LGR6Q9HBX8 967 aa27.83■■■□□ 2.05
TMEM250-204ENST00000557985 IFT57Q9NWB7 429 aa27.83■■■□□ 2.05
TMEM250-204ENST00000557985 IRX6P78412 446 aaPredicted RBP27.82■■■□□ 2.04
TMEM250-204ENST00000557985 EXOSC9Q06265 439 aaKnown RBP27.82■■■□□ 2.04
TMEM250-204ENST00000557985 AKAP4Q5JQC9 854 aa27.82■■■□□ 2.04
TMEM250-204ENST00000557985 CFAP44Q96MT7 982 aa27.82■■■□□ 2.04
TMEM250-204ENST00000557985 C1orf141Q5JVX7 400 aa27.82■■■□□ 2.04
TMEM250-204ENST00000557985 MPRIPQ6WCQ1 1025 aa27.82■■■□□ 2.04
TMEM250-204ENST00000557985 MBIPQ9NS73 344 aa27.82■■■□□ 2.04
TMEM250-204ENST00000557985 MIS18AQ9NYP9 233 aa27.82■■■□□ 2.04
TMEM250-204ENST00000557985 CRB1P82279 1406 aa27.81■■■□□ 2.04
TMEM250-204ENST00000557985 C8orf37Q96NL8 207 aa27.81■■■□□ 2.04
TMEM250-204ENST00000557985 SPG7Q9UQ90 795 aa27.8■■■□□ 2.04
TMEM250-204ENST00000557985 PLCH1Q4KWH8 1693 aa27.8■■■□□ 2.04
TMEM250-204ENST00000557985 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
TMEM250-204ENST00000557985 IL2RBP14784 551 aa27.79■■■□□ 2.04
TMEM250-204ENST00000557985 SPATA31A6Q5VVP1 1343 aa27.78■■■□□ 2.04
TMEM250-204ENST00000557985 FKBP8Q14318 412 aa27.77■■■□□ 2.04
TMEM250-204ENST00000557985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.77■■■□□ 2.04
TMEM250-204ENST00000557985 CHL1O00533 1208 aa27.77■■■□□ 2.04
TMEM250-204ENST00000557985 NEFLP07196 543 aa27.76■■■□□ 2.03
TMEM250-204ENST00000557985 ZCRB1Q8TBF4 217 aaKnown RBP27.75■■■□□ 2.03
TMEM250-204ENST00000557985 ELL2O00472 640 aaPredicted RBP27.74■■■□□ 2.03
TMEM250-204ENST00000557985 CYP27B1O15528 508 aa27.74■■■□□ 2.03
TMEM250-204ENST00000557985 BCAR3O75815 825 aa27.74■■■□□ 2.03
TMEM250-204ENST00000557985 PHKG2P15735 406 aa27.74■■■□□ 2.03
TMEM250-204ENST00000557985 LRP6O75581 1613 aa27.74■■■□□ 2.03
TMEM250-204ENST00000557985 RNMTO43148 476 aaKnown RBP27.73■■■□□ 2.03
TMEM250-204ENST00000557985 PLIN1O60240 522 aa27.73■■■□□ 2.03
TMEM250-204ENST00000557985 OVOS2A0A0G2JMS6 1433 aa27.73■■■□□ 2.03
TMEM250-204ENST00000557985 RNF123Q5XPI4 1314 aa27.73■■■□□ 2.03
TMEM250-204ENST00000557985 IFNL2Q8IZJ0 200 aa27.73■■■□□ 2.03
TMEM250-204ENST00000557985 CCDC9Q9Y3X0 531 aaKnown RBP27.73■■■□□ 2.03
TMEM250-204ENST00000557985 SLIT2O94813 1529 aa27.72■■■□□ 2.03
TMEM250-204ENST00000557985 TAF7Q15545 349 aaPredicted RBP27.71■■■□□ 2.03
TMEM250-204ENST00000557985 TSPYL6Q8N831 410 aa27.71■■■□□ 2.03
TMEM250-204ENST00000557985 TSPYL4Q9UJ04 414 aa27.71■■■□□ 2.03
TMEM250-204ENST00000557985 CEMIPQ8WUJ3 1361 aa27.71■■■□□ 2.03
TMEM250-204ENST00000557985 MEX3CQ5U5Q3 659 aaKnown RBP27.71■■■□□ 2.03
TMEM250-204ENST00000557985 DDX54Q8TDD1 881 aaKnown RBP27.71■■■□□ 2.03
TMEM250-204ENST00000557985 RRP1P56182 461 aaKnown RBP27.7■■■□□ 2.03
TMEM250-204ENST00000557985 C8orf58Q8NAV2 365 aa27.7■■■□□ 2.03
TMEM250-204ENST00000557985 NRAPQ86VF7 1730 aa27.7■■■□□ 2.02
TMEM250-204ENST00000557985 VIRMAQ69YN4 1812 aaKnown RBP27.7■■■□□ 2.02
TMEM250-204ENST00000557985 RARSP54136 660 aaKnown RBP27.69■■■□□ 2.02
TMEM250-204ENST00000557985 MYT1Q01538 1121 aa27.69■■■□□ 2.02
TMEM250-204ENST00000557985 KRT24Q2M2I5 525 aa27.69■■■□□ 2.02
TMEM250-204ENST00000557985 UNC5CLQ8IV45 518 aa27.69■■■□□ 2.02
TMEM250-204ENST00000557985 PARP4Q9UKK3 1724 aaKnown RBP27.69■■■□□ 2.02
TMEM250-204ENST00000557985 TEFQ10587 303 aa27.69■■■□□ 2.02
TMEM250-204ENST00000557985 BCL2L13Q9BXK5 485 aa27.69■■■□□ 2.02
TMEM250-204ENST00000557985 PKD1L3Q7Z443 1732 aa27.68■■■□□ 2.02
TMEM250-204ENST00000557985 SPATA31A1Q5TZJ5 1347 aa27.68■■■□□ 2.02
TMEM250-204ENST00000557985 NWD2Q9ULI1 1742 aa27.68■■■□□ 2.02
TMEM250-204ENST00000557985 FNBP4Q8N3X1 1017 aaPredicted RBP27.66■■■□□ 2.02
TMEM250-204ENST00000557985 LRRC37A3O60309 1634 aa27.66■■■□□ 2.02
TMEM250-204ENST00000557985 VAMP4O75379 141 aa27.66■■■□□ 2.02
TMEM250-204ENST00000557985 SPATA31A5Q5VU36 1347 aa27.66■■■□□ 2.02
TMEM250-204ENST00000557985 BCL9LQ86UU0 1499 aa27.66■■■□□ 2.02
TMEM250-204ENST00000557985 SPATA31A7Q8IWB4 1347 aa27.66■■■□□ 2.02
TMEM250-204ENST00000557985 PCDH11XQ9BZA7 1347 aa27.65■■■□□ 2.02
TMEM250-204ENST00000557985 PCDH11YQ9BZA8 1340 aa27.65■■■□□ 2.02
TMEM250-204ENST00000557985 PLEKHG2Q9H7P9 1386 aa27.64■■■□□ 2.02
TMEM250-204ENST00000557985 CT47B1P0C2W7 299 aaPredicted RBP27.64■■■□□ 2.02
TMEM250-204ENST00000557985 TWISTNBQ3B726 338 aaPredicted RBP27.64■■■□□ 2.02
TMEM250-204ENST00000557985 USP21Q9UK80 565 aa27.64■■■□□ 2.02
TMEM250-204ENST00000557985 DCAF5Q96JK2 942 aa27.63■■■□□ 2.01
TMEM250-204ENST00000557985 KDM6AO15550 1401 aaPredicted RBP27.63■■■□□ 2.01
TMEM250-204ENST00000557985 BTBD11A6QL63 1104 aa27.62■■■□□ 2.01
TMEM250-204ENST00000557985 NFATC2IPQ8NCF5 419 aa27.62■■■□□ 2.01
TMEM250-204ENST00000557985 SSH1Q8WYL5 1049 aa27.62■■■□□ 2.01
TMEM250-204ENST00000557985 TCERG1O14776 1098 aaKnown RBP27.61■■■□□ 2.01
TMEM250-204ENST00000557985 KCNQ3O43525 872 aa27.61■■■□□ 2.01
TMEM250-204ENST00000557985 DISP2A7MBM2 1401 aa27.61■■■□□ 2.01
TMEM250-204ENST00000557985 EXOC5O00471 708 aa27.6■■■□□ 2.01
TMEM250-204ENST00000557985 HSP90AB1P08238 724 aaKnown RBP27.6■■■□□ 2.01
TMEM250-204ENST00000557985 THRAP3Q9Y2W1 955 aaKnown RBP27.6■■■□□ 2.01
TMEM250-204ENST00000557985 SCN11AQ9UI33 1791 aa27.6■■■□□ 2.01
TMEM250-204ENST00000557985 FRAT1Q92837 279 aaPredicted RBP27.6■■■□□ 2.01
TMEM250-204ENST00000557985 VPS72Q15906 364 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms